Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 RNU6-934P-201ENST00000365154 107 ntBASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 Y_RNA.338-201ENST00000365320 114 ntBASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 SNORD83.1-201ENST00000411362 77 ntBASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 HMGN2P23-201ENST00000456759 269 ntBASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 RPL23AP42-201ENST00000471152 471 ntBASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 RNU6-1057P-201ENST00000517162 102 ntBASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SCUBE3Q8IX30 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 Y_RNA.164-201ENST00000363709 102 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 Y_RNA.226-201ENST00000364337 114 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 SNORA67.3-201ENST00000384366 140 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 MIR125B2-201ENST00000385128 89 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 RNU6-604P-201ENST00000390917 100 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 RNU6-1265P-201ENST00000516342 103 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 RNA5SP402-201ENST00000517148 110 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 MIR3664-201ENST00000579074 99 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 MIR4773-1-201ENST00000637203 78 ntBASIC2.39□□□□□ -2.03
SCUBE3Q8IX30 SNORD113.3-201ENST00000364630 78 ntBASIC2.38□□□□□ -2.03
SCUBE3Q8IX30 SNORD23.1-201ENST00000408212 104 ntBASIC2.38□□□□□ -2.03
SCUBE3Q8IX30 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.38□□□□□ -2.03
SCUBE3Q8IX30 RNU6-274P-201ENST00000459566 107 ntBASIC2.38□□□□□ -2.03
SCUBE3Q8IX30 RNU6-752P-201ENST00000516376 102 ntBASIC2.38□□□□□ -2.03
SCUBE3Q8IX30 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
SCUBE3Q8IX30 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SCUBE3Q8IX30 AC110620.1-201ENST00000416042 228 ntBASIC2.37□□□□□ -2.03
SCUBE3Q8IX30 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
SCUBE3Q8IX30 AC245884.12-201ENST00000615364 59 ntBASIC2.37□□□□□ -2.03
SCUBE3Q8IX30 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SCUBE3Q8IX30 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SCUBE3Q8IX30 RNU6-382P-201ENST00000365181 106 ntBASIC2.36□□□□□ -2.03
SCUBE3Q8IX30 AC069503.3-201ENST00000618674 145 ntBASIC2.36□□□□□ -2.03
SCUBE3Q8IX30 MIR8063-201ENST00000621930 81 ntBASIC2.36□□□□□ -2.03
SCUBE3Q8IX30 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 RNU6-535P-201ENST00000384722 107 ntBASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 RNU6-141P-201ENST00000410499 105 ntBASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 RNU6-287P-201ENST00000516230 98 ntBASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 AL645939.4-201ENST00000604495 135 ntBASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.35□□□□□ -2.03
SCUBE3Q8IX30 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.34□□□□□ -2.03
SCUBE3Q8IX30 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SCUBE3Q8IX30 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.34□□□□□ -2.03
SCUBE3Q8IX30 RNA5SP245-201ENST00000364239 121 ntBASIC2.34□□□□□ -2.03
SCUBE3Q8IX30 AC244098.3-201ENST00000424803 96 ntBASIC2.34□□□□□ -2.03
SCUBE3Q8IX30 MIR4771-2-201ENST00000577758 74 ntBASIC2.34□□□□□ -2.03
SCUBE3Q8IX30 MIR4771-1-201ENST00000582617 74 ntBASIC2.34□□□□□ -2.03
SCUBE3Q8IX30 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.34□□□□□ -2.03
SCUBE3Q8IX30 RNU6-669P-201ENST00000365575 107 ntBASIC2.33□□□□□ -2.04
SCUBE3Q8IX30 MIR524-201ENST00000385242 87 ntBASIC2.33□□□□□ -2.04
SCUBE3Q8IX30 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.33□□□□□ -2.04
SCUBE3Q8IX30 MIR5694-201ENST00000581190 76 ntBASIC2.33□□□□□ -2.04
SCUBE3Q8IX30 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SCUBE3Q8IX30 Y_RNA.330-201ENST00000365230 109 ntBASIC2.32□□□□□ -2.04
SCUBE3Q8IX30 SNORD115-44-201ENST00000365391 82 ntBASIC2.32□□□□□ -2.04
SCUBE3Q8IX30 SNORA40.6-201ENST00000391153 128 ntBASIC2.32□□□□□ -2.04
SCUBE3Q8IX30 MIR1287-201ENST00000408492 90 ntBASIC2.32□□□□□ -2.04
SCUBE3Q8IX30 AC036111.3-201ENST00000526389 112 ntBASIC2.32□□□□□ -2.04
SCUBE3Q8IX30 MIR4713-201ENST00000582691 75 ntBASIC2.32□□□□□ -2.04
SCUBE3Q8IX30 Y_RNA.258-201ENST00000364613 105 ntBASIC2.31□□□□□ -2.04
SCUBE3Q8IX30 SNORD1A-201ENST00000364968 72 ntBASIC2.31□□□□□ -2.04
SCUBE3Q8IX30 RNU6-614P-201ENST00000384369 107 ntBASIC2.31□□□□□ -2.04
SCUBE3Q8IX30 AL691482.2-201ENST00000457453 84 ntBASIC2.31□□□□□ -2.04
SCUBE3Q8IX30 AL078603.1-201ENST00000603824 313 ntBASIC2.31□□□□□ -2.04
SCUBE3Q8IX30 AC008608.1-201ENST00000603910 127 ntBASIC2.31□□□□□ -2.04
SCUBE3Q8IX30 U6.59-201ENST00000615686 107 ntBASIC2.31□□□□□ -2.04
SCUBE3Q8IX30 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
SCUBE3Q8IX30 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 MIR302D-201ENST00000362275 68 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 SNORD33-201ENST00000362761 85 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 RPS26P5-201ENST00000418544 335 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 AC244505.6-201ENST00000452829 130 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 snoU13.9-201ENST00000458927 103 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 AC079140.2-201ENST00000506193 142 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 MIR4498-201ENST00000577599 66 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SCUBE3Q8IX30 RNU6-364P-201ENST00000384387 107 ntBASIC2.29□□□□□ -2.04
SCUBE3Q8IX30 RNU6-1053P-201ENST00000515930 101 ntBASIC2.29□□□□□ -2.04
SCUBE3Q8IX30 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SCUBE3Q8IX30 RNU6-1065P-201ENST00000384513 106 ntBASIC2.28□□□□□ -2.04
SCUBE3Q8IX30 SNORD111-201ENST00000408139 94 ntBASIC2.28□□□□□ -2.04
SCUBE3Q8IX30 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
SCUBE3Q8IX30 RNU6-165P-201ENST00000517170 99 ntBASIC2.28□□□□□ -2.04
SCUBE3Q8IX30 MIR4676-201ENST00000583078 72 ntBASIC2.28□□□□□ -2.04
SCUBE3Q8IX30 AC079150.2-201ENST00000443733 78 ntBASIC2.27□□□□□ -2.05
SCUBE3Q8IX30 AC019176.1-201ENST00000518519 225 ntBASIC2.27□□□□□ -2.05
SCUBE3Q8IX30 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SCUBE3Q8IX30 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 SNORA16B-201ENST00000364674 135 ntBASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 MIR633-201ENST00000384821 98 ntBASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 RNU6-982P-201ENST00000516216 102 ntBASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 269.2 ms