Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RETREG3Q86VR2 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 AC008608.1-201ENST00000603910 127 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 U6.81-201ENST00000612550 106 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 AC027335.2-201ENST00000624030 375 ntBASIC2.17□□□□□ -2.06
RETREG3Q86VR2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
RETREG3Q86VR2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RETREG3Q86VR2 RNU6-824P-201ENST00000363724 104 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 SNORA24B-201ENST00000384176 131 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 RNU6-994P-201ENST00000410507 111 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 AL591704.2-201ENST00000421658 181 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 RNU7-102P-201ENST00000458948 62 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 RNA5SP148-201ENST00000516527 94 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 MIR3198-2-201ENST00000577868 80 ntBASIC2.16□□□□□ -2.06
RETREG3Q86VR2 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.16□□□□□ -2.06
RETREG3Q86VR2 Y_RNA.205-201ENST00000364128 113 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 RNU6-895P-201ENST00000384125 103 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 MIR4298-201ENST00000584380 73 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
RETREG3Q86VR2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RETREG3Q86VR2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
RETREG3Q86VR2 Y_RNA.363-201ENST00000365529 113 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 MIR934-201ENST00000401241 83 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RETREG3Q86VR2 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.14□□□□□ -2.07
RETREG3Q86VR2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RETREG3Q86VR2 AC244505.6-201ENST00000452829 130 ntBASIC2.13□□□□□ -2.07
RETREG3Q86VR2 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
RETREG3Q86VR2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNU6-287P-201ENST00000516230 98 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNU6-977P-201ENST00000516411 103 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 RNA5SP24-201ENST00000516478 95 ntBASIC2.12□□□□□ -2.07
RETREG3Q86VR2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.12□□□□□ -2.07
RETREG3Q86VR2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
RETREG3Q86VR2 SNORD45.1-201ENST00000363181 77 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 SNORD115-44-201ENST00000365391 82 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 SNORD45A-201ENST00000384512 84 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 RNU6-1177P-201ENST00000391058 104 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 U3.27-201ENST00000391237 200 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 RNU7-21P-201ENST00000459430 62 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 MIR4804-201ENST00000581683 73 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 MIR8053-201ENST00000613344 75 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 MIR4773-1-201ENST00000637203 78 ntBASIC2.11□□□□□ -2.07
RETREG3Q86VR2 MIR337-201ENST00000362281 93 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 SNORA80D-201ENST00000384488 135 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RNU1-119P-201ENST00000391122 165 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RNU1-78P-201ENST00000391248 165 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 MIR2113-201ENST00000459007 91 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RNU6-274P-201ENST00000459566 107 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RN7SL429P-201ENST00000479090 223 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RN7SL489P-201ENST00000486185 223 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RN7SL327P-201ENST00000488659 223 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 MIR4422-201ENST00000581938 83 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 RN7SL853P-201ENST00000617250 223 ntBASIC2.1□□□□□ -2.07
RETREG3Q86VR2 MIR100-201ENST00000385259 80 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 RNU6-910P-201ENST00000390844 107 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 RNU7-90P-201ENST00000459216 62 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 RNU7-13P-201ENST00000516413 62 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 AL157834.3-201ENST00000615543 103 ntBASIC2.09□□□□□ -2.07
RETREG3Q86VR2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RETREG3Q86VR2 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 RNU6-471P-201ENST00000383944 106 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 AC093423.1-201ENST00000440817 142 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 AC008413.1-201ENST00000511864 177 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 RNU6-881P-201ENST00000516813 102 ntBASIC2.08□□□□□ -2.08
RETREG3Q86VR2 RNU6-369P-201ENST00000362515 102 ntBASIC2.07□□□□□ -2.08
RETREG3Q86VR2 RNU6-630P-201ENST00000391258 106 ntBASIC2.07□□□□□ -2.08
RETREG3Q86VR2 AC005520.4-201ENST00000604337 90 ntBASIC2.07□□□□□ -2.08
RETREG3Q86VR2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RETREG3Q86VR2 RNU7-56P-201ENST00000458744 62 ntBASIC2.06□□□□□ -2.08
RETREG3Q86VR2 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
RETREG3Q86VR2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RETREG3Q86VR2 MIR1-1-201ENST00000362147 71 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 RNU6-382P-201ENST00000365181 106 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 AC008834.1-201ENST00000511612 175 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 AL078603.1-201ENST00000603824 313 ntBASIC2.05□□□□□ -2.08
RETREG3Q86VR2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RETREG3Q86VR2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RETREG3Q86VR2 Y_RNA.32-201ENST00000362589 110 ntBASIC2.04□□□□□ -2.08
RETREG3Q86VR2 SNORD115-22-201ENST00000364456 82 ntBASIC2.04□□□□□ -2.08
RETREG3Q86VR2 MIR520F-201ENST00000384824 87 ntBASIC2.04□□□□□ -2.08
RETREG3Q86VR2 RNU6-604P-201ENST00000390917 100 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms