Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 MIR2052-201ENST00000636055 55 ntBASIC1.01□□□□□ -2.25
VPS53Q5VIR6 MIR101-2-201ENST00000362195 79 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.56-201ENST00000362798 112 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.567-201ENST00000384736 106 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 AC109327.2-201ENST00000448339 378 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 RNU6-351P-201ENST00000516097 100 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 MIR4777-201ENST00000583710 86 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 RNU7-10P-201ENST00000607194 63 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 AC012531.4-201ENST00000616509 177 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 AC091304.10-201ENST00000641554 121 ntBASIC1□□□□□ -2.25
VPS53Q5VIR6 MIR520H-201ENST00000385126 88 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 SNORD100-201ENST00000408573 76 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNA5SP89-201ENST00000410300 108 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 BX276092.1-201ENST00000427368 251 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNU6-795P-201ENST00000516323 103 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 SNORA40.13-201ENST00000516379 120 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.697-201ENST00000516776 113 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNU6-850P-201ENST00000516934 103 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNU6-448P-201ENST00000517052 107 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 MIR548H5-201ENST00000580314 60 ntBASIC0.99□□□□□ -2.25
VPS53Q5VIR6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS53Q5VIR6 RNU6-1244P-201ENST00000363614 108 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.348-201ENST00000365403 103 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.536-201ENST00000384621 113 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 RNU6-813P-201ENST00000384691 107 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 MIR608-201ENST00000384820 100 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 MTATP8P2-201ENST00000435212 202 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.677-201ENST00000516401 85 ntBASIC0.98□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.342-201ENST00000365352 113 ntBASIC0.97□□□□□ -2.25
VPS53Q5VIR6 Y_RNA.705-201ENST00000516862 110 ntBASIC0.97□□□□□ -2.25
VPS53Q5VIR6 RNU6-1125P-201ENST00000363601 107 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 RNU6-480P-201ENST00000384332 107 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 RNU6-291P-201ENST00000384720 107 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 MIR519A1-201ENST00000385257 85 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 MIR548Z-201ENST00000584743 97 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 MIR6734-201ENST00000621166 68 ntBASIC0.96□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.467-201ENST00000384297 102 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 RNU6-535P-201ENST00000384722 107 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 MIR635-201ENST00000384830 98 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 RNU6-972P-201ENST00000391208 107 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 RNU6-86P-201ENST00000606534 107 ntBASIC0.95□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.57-201ENST00000362806 113 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 RNU6-640P-201ENST00000363693 105 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VPS53Q5VIR6 RNU6-905P-201ENST00000384434 107 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 MIR573-201ENST00000384964 99 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 AC092628.1-201ENST00000436250 252 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 AC002350.1-201ENST00000490759 375 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 PSMC1P5-201ENST00000512850 177 ntBASIC0.94□□□□□ -2.26
VPS53Q5VIR6 RNU6-644P-201ENST00000391155 98 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 RNU6-887P-201ENST00000410660 100 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 SNORD63B-201ENST00000411005 70 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 AC138907.6-201ENST00000568401 126 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 AC138869.1-201ENST00000568623 124 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 uc_338.16-201ENST00000621804 95 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.93□□□□□ -2.26
VPS53Q5VIR6 TRAJ51-201ENST00000504127 63 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 RNU7-61P-201ENST00000515897 61 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 RNA5SP220-201ENST00000516298 104 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.694-201ENST00000516677 117 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
VPS53Q5VIR6 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 SNORD99-201ENST00000408612 74 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 MIR548J-201ENST00000408833 112 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 AC097635.1-201ENST00000450678 155 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 AC244505.6-201ENST00000452829 130 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 MIR151B-201ENST00000584249 96 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 AC103810.7-201ENST00000607821 91 ntBASIC0.91□□□□□ -2.26
VPS53Q5VIR6 Y_RNA.32-201ENST00000362589 110 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 RNA5SP117-201ENST00000365294 118 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 MIR181B2-201ENST00000385004 89 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 RNU6-1254P-201ENST00000391266 104 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.9□□□□□ -2.27
VPS53Q5VIR6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.27
VPS53Q5VIR6 RNU6-1260P-201ENST00000362944 107 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 MIR516A2-201ENST00000384888 90 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 MIR516A1-201ENST00000385033 90 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 AC244098.3-201ENST00000424803 96 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 RNU7-106P-201ENST00000459514 67 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 SNORA31.14-201ENST00000516728 116 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 RNU6-135P-201ENST00000516769 101 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
VPS53Q5VIR6 CYP3A137P-201ENST00000562436 69 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 MIR3612-201ENST00000579753 87 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
VPS53Q5VIR6 SNORD36A-201ENST00000362874 73 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 SNORD116-10-201ENST00000363791 102 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 RNA5SP245-201ENST00000364239 121 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 SNORD58A-201ENST00000383875 65 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 AL513043.2-201ENST00000573941 143 ntBASIC0.88□□□□□ -2.27
VPS53Q5VIR6 U7.3-201ENST00000616123 62 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms