Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 Y_RNA.247-201ENST00000364500 92 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 RNU6-571P-201ENST00000384128 107 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 Y_RNA.568-201ENST00000384742 113 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 SNORA7.5-201ENST00000410672 110 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 SNORD63B-201ENST00000411005 70 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 RNU7-106P-201ENST00000459514 67 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 MIR8087-201ENST00000612745 78 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 AC067863.3-201ENST00000624172 122 ntBASIC0.18□□□□□ -2.38
CDK3Q00526 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 RNA5SP403-201ENST00000363598 108 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 Y_RNA.258-201ENST00000364613 105 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 SNORD58C-201ENST00000365223 64 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 Y_RNA.344-201ENST00000365381 112 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 RNY1P5-201ENST00000383890 115 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 SNORD38.2-201ENST00000384470 69 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 MT-TR-201ENST00000387439 65 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 RNU7-195P-201ENST00000458793 62 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
CDK3Q00526 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
CDK3Q00526 MIR760-201ENST00000390220 80 ntBASIC0.16□□□□□ -2.38
CDK3Q00526 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.16□□□□□ -2.38
CDK3Q00526 RNU7-129P-201ENST00000516128 62 ntBASIC0.16□□□□□ -2.38
CDK3Q00526 RNU6-850P-201ENST00000516934 103 ntBASIC0.16□□□□□ -2.38
CDK3Q00526 MTND5P40-201ENST00000559945 246 ntBASIC0.16□□□□□ -2.38
CDK3Q00526 SNORA70.25-201ENST00000612741 95 ntBASIC0.16□□□□□ -2.38
CDK3Q00526 AL512310.12-203ENST00000640543 90 ntBASIC0.16□□□□□ -2.38
CDK3Q00526 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.15□□□□□ -2.38
CDK3Q00526 RNY4P6-201ENST00000363667 96 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 RNU6-209P-201ENST00000384118 107 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 MIR548I1-201ENST00000408810 149 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 RNU7-107P-201ENST00000459121 61 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 RNU6-1211P-201ENST00000459179 105 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 RNU6-848P-201ENST00000515948 107 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 Y_RNA.809-201ENST00000516058 95 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 RNU6-617P-201ENST00000516147 107 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 RNU6-473P-201ENST00000516164 107 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 RNU6-1049P-201ENST00000516414 107 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 RNA5SP330-201ENST00000517096 96 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 MTND5P18-201ENST00000445624 1801 ntBASIC0.15□□□□□ -2.39
CDK3Q00526 MIR519A1-201ENST00000385257 85 ntBASIC0.14□□□□□ -2.39
CDK3Q00526 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.14□□□□□ -2.39
CDK3Q00526 RNU6-971P-201ENST00000516920 106 ntBASIC0.14□□□□□ -2.39
CDK3Q00526 RNU6-1006P-201ENST00000516998 103 ntBASIC0.14□□□□□ -2.39
CDK3Q00526 MIR6718-201ENST00000616153 80 ntBASIC0.14□□□□□ -2.39
CDK3Q00526 AL162376.1-201ENST00000624117 175 ntBASIC0.14□□□□□ -2.39
CDK3Q00526 RNU6-363P-201ENST00000362895 105 ntBASIC0.13□□□□□ -2.39
CDK3Q00526 RNU6-774P-201ENST00000363238 107 ntBASIC0.13□□□□□ -2.39
CDK3Q00526 Y_RNA.342-201ENST00000365352 113 ntBASIC0.13□□□□□ -2.39
CDK3Q00526 MIR539-201ENST00000365690 78 ntBASIC0.13□□□□□ -2.39
CDK3Q00526 RNU6-772P-201ENST00000516042 105 ntBASIC0.13□□□□□ -2.39
CDK3Q00526 MIR499B-201ENST00000636498 73 ntBASIC0.13□□□□□ -2.39
CDK3Q00526 Y_RNA.155-201ENST00000363632 101 ntBASIC0.12□□□□□ -2.39
CDK3Q00526 Y_RNA.346-201ENST00000365385 112 ntBASIC0.12□□□□□ -2.39
CDK3Q00526 Y_RNA.507-201ENST00000384500 99 ntBASIC0.12□□□□□ -2.39
CDK3Q00526 MIR516A2-201ENST00000384888 90 ntBASIC0.12□□□□□ -2.39
CDK3Q00526 MIR516A1-201ENST00000385033 90 ntBASIC0.12□□□□□ -2.39
CDK3Q00526 RNU6-127P-201ENST00000390897 107 ntBASIC0.12□□□□□ -2.39
CDK3Q00526 SNORD41.1-201ENST00000391000 69 ntBASIC0.12□□□□□ -2.39
CDK3Q00526 RNU6-269P-201ENST00000391077 97 ntBASIC0.12□□□□□ -2.39
CDK3Q00526 RNU6-1313P-201ENST00000362622 102 ntBASIC0.11□□□□□ -2.39
CDK3Q00526 RNU6-1260P-201ENST00000362944 107 ntBASIC0.11□□□□□ -2.39
CDK3Q00526 RNA5SP128-201ENST00000365305 116 ntBASIC0.11□□□□□ -2.39
CDK3Q00526 RNU6-409P-201ENST00000384114 104 ntBASIC0.11□□□□□ -2.39
CDK3Q00526 RNU6-524P-201ENST00000384270 107 ntBASIC0.11□□□□□ -2.39
CDK3Q00526 Y_RNA.586-201ENST00000391146 98 ntBASIC0.11□□□□□ -2.39
CDK3Q00526 SPINT5P-201ENST00000448174 155 ntBASIC0.11□□□□□ -2.39
CDK3Q00526 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.11□□□□□ -2.39
CDK3Q00526 Y_RNA.35-201ENST00000362601 101 ntBASIC0.1□□□□□ -2.39
CDK3Q00526 MIR643-201ENST00000385267 97 ntBASIC0.1□□□□□ -2.39
CDK3Q00526 MIR1197-201ENST00000408818 88 ntBASIC0.1□□□□□ -2.39
CDK3Q00526 MIR548H2-201ENST00000408874 88 ntBASIC0.1□□□□□ -2.39
CDK3Q00526 AL161932.1-201ENST00000437408 146 ntBASIC0.1□□□□□ -2.39
CDK3Q00526 RPL39P34-201ENST00000477141 156 ntBASIC0.1□□□□□ -2.39
CDK3Q00526 MIR3920-201ENST00000581751 86 ntBASIC0.1□□□□□ -2.39
CDK3Q00526 AL035470.1-201ENST00000622571 220 ntBASIC0.1□□□□□ -2.39
CDK3Q00526 AL157777.2-201ENST00000258070 137 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 Y_RNA.115-201ENST00000363272 98 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 RNA5SP457-201ENST00000363657 124 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 Y_RNA.218-201ENST00000364218 104 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 Y_RNA.362-201ENST00000365518 110 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 MIR501-201ENST00000390204 84 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 RNU6-816P-201ENST00000390914 107 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 RNU6-1268P-201ENST00000391214 107 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 RNA5SP63-201ENST00000391225 112 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 RNU6-1239P-201ENST00000391310 107 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 RNU6-1265P-201ENST00000516342 103 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 RNU7-13P-201ENST00000516413 62 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 MIR548AG2-201ENST00000581228 64 ntBASIC0.09□□□□□ -2.4
CDK3Q00526 SNORD38.1-201ENST00000363863 68 ntBASIC0.08□□□□□ -2.4
CDK3Q00526 SNORD114-9-201ENST00000364370 72 ntBASIC0.08□□□□□ -2.4
CDK3Q00526 Y_RNA.323-201ENST00000365157 109 ntBASIC0.08□□□□□ -2.4
CDK3Q00526 Y_RNA.549-201ENST00000384657 102 ntBASIC0.08□□□□□ -2.4
CDK3Q00526 RNU6-1018P-201ENST00000516577 106 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 250.5 ms