Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNU6-135P-201ENST00000516769 101 ntBASIC0.84□□□□□ -2.27
NKX6-1P78426 MIR1273G-201ENST00000577677 100 ntBASIC0.84□□□□□ -2.27
NKX6-1P78426 RNU6-90P-201ENST00000606352 106 ntBASIC0.84□□□□□ -2.27
NKX6-1P78426 uc_338.16-201ENST00000621804 95 ntBASIC0.84□□□□□ -2.27
NKX6-1P78426 MIR18A-201ENST00000362310 71 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 RNY3P2-201ENST00000362918 102 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 Y_RNA.377-201ENST00000365644 108 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 BX276092.1-201ENST00000427368 251 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 AL353813.1-201ENST00000440700 253 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.83□□□□□ -2.28
NKX6-1P78426 AC138907.6-201ENST00000568401 126 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 AC138869.1-201ENST00000568623 124 ntBASIC0.83□□□□□ -2.28
NKX6-1P78426 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.83□□□□□ -2.28
NKX6-1P78426 Y_RNA.115-201ENST00000363272 98 ntBASIC0.82□□□□□ -2.28
NKX6-1P78426 RNA5SP457-201ENST00000363657 124 ntBASIC0.82□□□□□ -2.28
NKX6-1P78426 MIR1302-5-201ENST00000408164 150 ntBASIC0.82□□□□□ -2.28
NKX6-1P78426 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
NKX6-1P78426 RNU6-589P-201ENST00000516485 107 ntBASIC0.82□□□□□ -2.28
NKX6-1P78426 SNORA31.14-201ENST00000516728 116 ntBASIC0.82□□□□□ -2.28
NKX6-1P78426 AC141557.1-201ENST00000540982 400 ntBASIC0.82□□□□□ -2.28
NKX6-1P78426 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
NKX6-1P78426 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
NKX6-1P78426 Y_RNA.10-201ENST00000362371 110 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 Y_RNA.32-201ENST00000362589 110 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 RNU4-36P-201ENST00000364294 144 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 RNU6-1325P-201ENST00000364905 105 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 MIR577-201ENST00000385196 96 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 MIR548G-201ENST00000408442 89 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.81□□□□□ -2.28
NKX6-1P78426 Y_RNA.681-201ENST00000516445 113 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 Y_RNA.709-201ENST00000516952 92 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 MIR3678-201ENST00000578455 94 ntBASIC0.81□□□□□ -2.28
NKX6-1P78426 RNU6-832P-201ENST00000363319 107 ntBASIC0.8□□□□□ -2.28
NKX6-1P78426 SNRPGP12-201ENST00000449481 213 ntBASIC0.8□□□□□ -2.28
NKX6-1P78426 RNU6-1006P-201ENST00000516998 103 ntBASIC0.8□□□□□ -2.28
NKX6-1P78426 RNU6-170P-201ENST00000362832 104 ntBASIC0.79□□□□□ -2.28
NKX6-1P78426 Y_RNA.433-201ENST00000384089 102 ntBASIC0.79□□□□□ -2.28
NKX6-1P78426 AC092628.1-201ENST00000436250 252 ntBASIC0.79□□□□□ -2.28
NKX6-1P78426 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
NKX6-1P78426 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
NKX6-1P78426 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.79□□□□□ -2.28
NKX6-1P78426 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
NKX6-1P78426 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
NKX6-1P78426 RNU6-1099P-201ENST00000363533 107 ntBASIC0.78□□□□□ -2.28
NKX6-1P78426 RNU6-1229P-201ENST00000364295 107 ntBASIC0.78□□□□□ -2.28
NKX6-1P78426 MIR644A-201ENST00000385262 94 ntBASIC0.78□□□□□ -2.28
NKX6-1P78426 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.78□□□□□ -2.28
NKX6-1P78426 Y_RNA.659-201ENST00000515994 113 ntBASIC0.78□□□□□ -2.28
NKX6-1P78426 RNU6-850P-201ENST00000516934 103 ntBASIC0.78□□□□□ -2.28
NKX6-1P78426 Y_RNA.163-201ENST00000363702 113 ntBASIC0.77□□□□□ -2.29
NKX6-1P78426 Y_RNA.247-201ENST00000364500 92 ntBASIC0.77□□□□□ -2.29
NKX6-1P78426 Y_RNA.342-201ENST00000365352 113 ntBASIC0.77□□□□□ -2.29
NKX6-1P78426 RNU6-1113P-201ENST00000384348 107 ntBASIC0.77□□□□□ -2.29
NKX6-1P78426 SNORD45B-201ENST00000364617 72 ntBASIC0.76□□□□□ -2.29
NKX6-1P78426 MIR140-201ENST00000385282 100 ntBASIC0.76□□□□□ -2.29
NKX6-1P78426 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
NKX6-1P78426 RNA5SP62-201ENST00000363457 110 ntBASIC0.75□□□□□ -2.29
NKX6-1P78426 RNA5SP245-201ENST00000364239 121 ntBASIC0.75□□□□□ -2.29
NKX6-1P78426 Y_RNA.567-201ENST00000384736 106 ntBASIC0.75□□□□□ -2.29
NKX6-1P78426 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
NKX6-1P78426 SNORD63B-201ENST00000411005 70 ntBASIC0.75□□□□□ -2.29
NKX6-1P78426 TRAJ51-201ENST00000504127 63 ntBASIC0.75□□□□□ -2.29
NKX6-1P78426 Y_RNA.78-201ENST00000362970 110 ntBASIC0.74□□□□□ -2.29
NKX6-1P78426 Y_RNA.173-201ENST00000363776 113 ntBASIC0.74□□□□□ -2.29
NKX6-1P78426 Y_RNA.601-201ENST00000410500 113 ntBASIC0.74□□□□□ -2.29
NKX6-1P78426 AC244505.6-201ENST00000452829 130 ntBASIC0.74□□□□□ -2.29
NKX6-1P78426 MIR4439-201ENST00000583746 80 ntBASIC0.74□□□□□ -2.29
NKX6-1P78426 MIR4639-201ENST00000584938 69 ntBASIC0.74□□□□□ -2.29
NKX6-1P78426 MIR924-201ENST00000638017 53 ntBASIC0.74□□□□□ -2.29
NKX6-1P78426 Y_RNA.57-201ENST00000362806 113 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 RNA5SP257-201ENST00000363023 116 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 RNU6-1125P-201ENST00000363601 107 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 RNU6-480P-201ENST00000384332 107 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 SNORD20-201ENST00000384550 80 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 MIR519A1-201ENST00000385257 85 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 AC097635.1-201ENST00000450678 155 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 Y_RNA.809-201ENST00000516058 95 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 RNU6-919P-201ENST00000516731 104 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 RNA5SP330-201ENST00000517096 96 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 AL109933.3-201ENST00000619095 188 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 MIR6513-201ENST00000621188 64 ntBASIC0.73□□□□□ -2.29
NKX6-1P78426 SNORD114-23-201ENST00000363536 72 ntBASIC0.72□□□□□ -2.29
NKX6-1P78426 RNU6-106P-201ENST00000384405 107 ntBASIC0.72□□□□□ -2.29
NKX6-1P78426 MIR599-201ENST00000385069 95 ntBASIC0.72□□□□□ -2.29
NKX6-1P78426 RNY4P18-201ENST00000391107 89 ntBASIC0.72□□□□□ -2.29
NKX6-1P78426 RNA5SP395-201ENST00000516567 118 ntBASIC0.72□□□□□ -2.29
NKX6-1P78426 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
NKX6-1P78426 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
NKX6-1P78426 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
NKX6-1P78426 RNU6-215P-201ENST00000365169 102 ntBASIC0.71□□□□□ -2.3
NKX6-1P78426 RNU6-716P-201ENST00000365621 103 ntBASIC0.71□□□□□ -2.3
NKX6-1P78426 SNORA51.5-201ENST00000384126 131 ntBASIC0.71□□□□□ -2.3
NKX6-1P78426 RNU6-1254P-201ENST00000391266 104 ntBASIC0.71□□□□□ -2.3
NKX6-1P78426 RNA5SP476-201ENST00000516613 103 ntBASIC0.71□□□□□ -2.3
NKX6-1P78426 RNA5SP94-201ENST00000516917 108 ntBASIC0.71□□□□□ -2.3
NKX6-1P78426 SNORD115-24-201ENST00000363528 82 ntBASIC0.7□□□□□ -2.3
NKX6-1P78426 SNORD28-201ENST00000384706 75 ntBASIC0.7□□□□□ -2.3
NKX6-1P78426 MIR516A2-201ENST00000384888 90 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 215.9 ms