Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SNORD100-201ENST00000408573 76 ntBASIC1.63□□□□□ -2.15
YBX1P67809 RNU4-62P-201ENST00000410125 130 ntBASIC1.63□□□□□ -2.15
YBX1P67809 SNORD83.1-201ENST00000411362 77 ntBASIC1.63□□□□□ -2.15
YBX1P67809 SNORD13-201ENST00000459299 104 ntBASIC1.63□□□□□ -2.15
YBX1P67809 SNORA18.5-201ENST00000516616 101 ntBASIC1.63□□□□□ -2.15
YBX1P67809 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
YBX1P67809 SNORA63.2-201ENST00000362603 126 ntBASIC1.62□□□□□ -2.15
YBX1P67809 RNU6-957P-201ENST00000363652 99 ntBASIC1.62□□□□□ -2.15
YBX1P67809 RNU6-132P-201ENST00000383863 107 ntBASIC1.62□□□□□ -2.15
YBX1P67809 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.62□□□□□ -2.15
YBX1P67809 MIR1276-201ENST00000408707 83 ntBASIC1.62□□□□□ -2.15
YBX1P67809 RNA5SP480-201ENST00000516840 109 ntBASIC1.62□□□□□ -2.15
YBX1P67809 RNU6-165P-201ENST00000517170 99 ntBASIC1.62□□□□□ -2.15
YBX1P67809 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
YBX1P67809 U7.4-201ENST00000614961 63 ntBASIC1.62□□□□□ -2.15
YBX1P67809 Y_RNA.13-201ENST00000362403 112 ntBASIC1.61□□□□□ -2.15
YBX1P67809 RNU6-161P-201ENST00000363051 106 ntBASIC1.61□□□□□ -2.15
YBX1P67809 Y_RNA.536-201ENST00000384621 113 ntBASIC1.61□□□□□ -2.15
YBX1P67809 Y_RNA.565-201ENST00000384719 101 ntBASIC1.61□□□□□ -2.15
YBX1P67809 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
YBX1P67809 MIR548U-201ENST00000390728 81 ntBASIC1.61□□□□□ -2.15
YBX1P67809 RNU6-75P-201ENST00000515944 104 ntBASIC1.61□□□□□ -2.15
YBX1P67809 MIR548H5-201ENST00000580314 60 ntBASIC1.61□□□□□ -2.15
YBX1P67809 MIR3064-201ENST00000581130 66 ntBASIC1.61□□□□□ -2.15
YBX1P67809 SNORD92-201ENST00000585078 85 ntBASIC1.61□□□□□ -2.15
YBX1P67809 AC104996.3-201ENST00000590718 94 ntBASIC1.61□□□□□ -2.15
YBX1P67809 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
YBX1P67809 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
YBX1P67809 MIRLET7F1-201ENST00000362202 87 ntBASIC1.6□□□□□ -2.15
YBX1P67809 RNU6-1229P-201ENST00000364295 107 ntBASIC1.6□□□□□ -2.15
YBX1P67809 SNORD113.3-201ENST00000364630 78 ntBASIC1.6□□□□□ -2.15
YBX1P67809 RNU6-686P-201ENST00000364839 107 ntBASIC1.6□□□□□ -2.15
YBX1P67809 RNU6-934P-201ENST00000365154 107 ntBASIC1.6□□□□□ -2.15
YBX1P67809 RNU6-380P-201ENST00000410207 107 ntBASIC1.6□□□□□ -2.15
YBX1P67809 AC015818.7-201ENST00000428754 109 ntBASIC1.6□□□□□ -2.15
YBX1P67809 RNU7-195P-201ENST00000458793 62 ntBASIC1.6□□□□□ -2.15
YBX1P67809 TRAJ51-201ENST00000504127 63 ntBASIC1.6□□□□□ -2.15
YBX1P67809 RNU6-1194P-201ENST00000516208 104 ntBASIC1.6□□□□□ -2.15
YBX1P67809 RNU6-1108P-201ENST00000516308 104 ntBASIC1.6□□□□□ -2.15
YBX1P67809 AL512310.8-201ENST00000550183 120 ntBASIC1.6□□□□□ -2.15
YBX1P67809 RNU7-10P-201ENST00000607194 63 ntBASIC1.6□□□□□ -2.15
YBX1P67809 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.6□□□□□ -2.15
YBX1P67809 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
YBX1P67809 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
YBX1P67809 Y_RNA.491-201ENST00000384417 107 ntBASIC1.59□□□□□ -2.15
YBX1P67809 AC048334.1-201ENST00000477975 159 ntBASIC1.59□□□□□ -2.15
YBX1P67809 RNU6-557P-201ENST00000516842 110 ntBASIC1.59□□□□□ -2.15
YBX1P67809 MIR3122-201ENST00000577243 73 ntBASIC1.59□□□□□ -2.15
YBX1P67809 MIR6082-201ENST00000613604 109 ntBASIC1.59□□□□□ -2.15
YBX1P67809 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
YBX1P67809 RNU6-392P-201ENST00000364926 101 ntBASIC1.58□□□□□ -2.16
YBX1P67809 FGF7P7-201ENST00000514120 227 ntBASIC1.58□□□□□ -2.16
YBX1P67809 RNA5SP220-201ENST00000516298 104 ntBASIC1.58□□□□□ -2.16
YBX1P67809 AC036111.3-201ENST00000526389 112 ntBASIC1.58□□□□□ -2.16
YBX1P67809 MIR4771-2-201ENST00000577758 74 ntBASIC1.58□□□□□ -2.16
YBX1P67809 MIR4771-1-201ENST00000582617 74 ntBASIC1.58□□□□□ -2.16
YBX1P67809 MIRLET7A1-201ENST00000362295 80 ntBASIC1.57□□□□□ -2.16
YBX1P67809 Y_RNA.56-201ENST00000362798 112 ntBASIC1.57□□□□□ -2.16
YBX1P67809 Y_RNA.327-201ENST00000365201 102 ntBASIC1.57□□□□□ -2.16
YBX1P67809 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
YBX1P67809 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.57□□□□□ -2.16
YBX1P67809 Y_RNA.809-201ENST00000516058 95 ntBASIC1.57□□□□□ -2.16
YBX1P67809 RN7SKP88-201ENST00000516847 250 ntBASIC1.57□□□□□ -2.16
YBX1P67809 7SK.8-201ENST00000612110 250 ntBASIC1.57□□□□□ -2.16
YBX1P67809 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.57□□□□□ -2.16
YBX1P67809 7SK.11-201ENST00000615477 250 ntBASIC1.57□□□□□ -2.16
YBX1P67809 7SK.13-201ENST00000622040 250 ntBASIC1.57□□□□□ -2.16
YBX1P67809 SNORA75.2-201ENST00000391138 150 ntBASIC1.56□□□□□ -2.16
YBX1P67809 SNORA75.3-201ENST00000391231 150 ntBASIC1.56□□□□□ -2.16
YBX1P67809 RNU6-1054P-201ENST00000411293 104 ntBASIC1.56□□□□□ -2.16
YBX1P67809 AC092628.1-201ENST00000436250 252 ntBASIC1.56□□□□□ -2.16
YBX1P67809 Y_RNA.660-201ENST00000516002 120 ntBASIC1.56□□□□□ -2.16
YBX1P67809 SNORA31.2-201ENST00000516019 134 ntBASIC1.56□□□□□ -2.16
YBX1P67809 Y_RNA.697-201ENST00000516776 113 ntBASIC1.56□□□□□ -2.16
YBX1P67809 RNU6-902P-201ENST00000517212 91 ntBASIC1.56□□□□□ -2.16
YBX1P67809 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.56□□□□□ -2.16
YBX1P67809 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
YBX1P67809 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
YBX1P67809 AL078603.1-201ENST00000603824 313 ntBASIC1.56□□□□□ -2.16
YBX1P67809 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
YBX1P67809 SNORD114-26-201ENST00000363543 72 ntBASIC1.55□□□□□ -2.16
YBX1P67809 Y_RNA.545-201ENST00000384652 105 ntBASIC1.55□□□□□ -2.16
YBX1P67809 MIR125B2-201ENST00000385128 89 ntBASIC1.55□□□□□ -2.16
YBX1P67809 RNU7-156P-201ENST00000517214 74 ntBASIC1.55□□□□□ -2.16
YBX1P67809 AC023827.1-201ENST00000569247 97 ntBASIC1.55□□□□□ -2.16
YBX1P67809 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
YBX1P67809 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
YBX1P67809 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
YBX1P67809 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
YBX1P67809 SNORD77.2-201ENST00000391045 68 ntBASIC1.54□□□□□ -2.16
YBX1P67809 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
YBX1P67809 RNU7-95P-201ENST00000459222 64 ntBASIC1.54□□□□□ -2.16
YBX1P67809 AC139453.2-201ENST00000487255 133 ntBASIC1.54□□□□□ -2.16
YBX1P67809 RNU6-765P-201ENST00000516916 99 ntBASIC1.54□□□□□ -2.16
YBX1P67809 MIR4303-201ENST00000581299 66 ntBASIC1.54□□□□□ -2.16
YBX1P67809 MIR4452-201ENST00000583004 71 ntBASIC1.54□□□□□ -2.16
YBX1P67809 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.54□□□□□ -2.16
YBX1P67809 TRDV1-202ENST00000621643 102 ntBASIC1.54□□□□□ -2.16
YBX1P67809 MIR519A1-201ENST00000385257 85 ntBASIC1.53□□□□□ -2.16
YBX1P67809 SNORD111-201ENST00000408139 94 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms