Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
ERVFC1-1P60608 MIR516A2-201ENST00000384888 90 ntBASIC0.89□□□□□ -2.27
ERVFC1-1P60608 MIR516A1-201ENST00000385033 90 ntBASIC0.89□□□□□ -2.27
ERVFC1-1P60608 MIR100-201ENST00000385259 80 ntBASIC0.89□□□□□ -2.27
ERVFC1-1P60608 RNU7-106P-201ENST00000459514 67 ntBASIC0.89□□□□□ -2.27
ERVFC1-1P60608 RNU6-977P-201ENST00000516411 103 ntBASIC0.89□□□□□ -2.27
ERVFC1-1P60608 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ERVFC1-1P60608 MIR1-1-201ENST00000362147 71 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.17-201ENST00000362433 111 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 RNU6-1134P-201ENST00000365156 101 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 RNU6-364P-201ENST00000384387 107 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 SNORA40.6-201ENST00000391153 128 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 SNORD63B-201ENST00000411005 70 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 SNORD124-201ENST00000459577 104 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 TRAJ51-201ENST00000504127 63 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 RMST_2.1-201ENST00000617263 136 ntBASIC0.88□□□□□ -2.27
ERVFC1-1P60608 MIR101-2-201ENST00000362195 79 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 SNORD36A-201ENST00000362874 73 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.224-201ENST00000364308 111 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.536-201ENST00000384621 113 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 RNU6-291P-201ENST00000384720 107 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 MIR520F-201ENST00000384824 87 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 AC004223.1-201ENST00000479840 271 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 RNU6-448P-201ENST00000517052 107 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
ERVFC1-1P60608 AC062037.1-201ENST00000605302 128 ntBASIC0.87□□□□□ -2.27
ERVFC1-1P60608 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.56-201ENST00000362798 112 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 RNA5SP245-201ENST00000364239 121 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 RNU6-219P-201ENST00000364728 107 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 RNU6-402P-201ENST00000410678 103 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 AC092628.1-201ENST00000436250 252 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 AC067940.1-201ENST00000458411 300 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 RNU6-267P-201ENST00000516714 103 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.697-201ENST00000516776 113 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 MIR4668-201ENST00000582284 70 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 MIR4295-201ENST00000585286 85 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.86□□□□□ -2.27
ERVFC1-1P60608 RNU1-124P-201ENST00000363861 145 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.191-201ENST00000363972 113 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.388-201ENST00000383919 113 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 RNU6-675P-201ENST00000384236 104 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 SNORD116-22-201ENST00000384430 92 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 MIR635-201ENST00000384830 98 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 SNORD89-201ENST00000390981 114 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 RNU1-119P-201ENST00000391122 165 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 RNU6-1254P-201ENST00000391266 104 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 MIR1302-4-201ENST00000408701 150 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.609-201ENST00000410669 89 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 RNY4P29-201ENST00000410801 97 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 Y_RNA.620-201ENST00000411009 88 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 RNU7-195P-201ENST00000458793 62 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 RNU7-85P-201ENST00000458851 63 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
ERVFC1-1P60608 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 AP003327.1-201ENST00000529684 127 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 MIR548H5-201ENST00000580314 60 ntBASIC0.85□□□□□ -2.27
ERVFC1-1P60608 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ERVFC1-1P60608 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
ERVFC1-1P60608 RNY1P4-201ENST00000384595 115 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 RNU6-535P-201ENST00000384722 107 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 MIR450A2-201ENST00000385022 100 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 MIR519A1-201ENST00000385257 85 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 snoU13.11-201ENST00000459219 104 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 RNU6-1110P-201ENST00000516462 101 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 MIR3660-201ENST00000584845 100 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 MIR6504-201ENST00000613520 61 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
ERVFC1-1P60608 MIR494-201ENST00000349529 81 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 RNU6-497P-201ENST00000365316 104 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 MIR520H-201ENST00000385126 88 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 MIR518E-201ENST00000385252 88 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 RNU6-243P-201ENST00000391140 107 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 FABP5P4-201ENST00000437203 171 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 Y_RNA.648-201ENST00000459455 110 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 AL078603.1-201ENST00000603824 313 ntBASIC0.83□□□□□ -2.28
ERVFC1-1P60608 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
ERVFC1-1P60608 Y_RNA.32-201ENST00000362589 110 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 Y_RNA.73-201ENST00000362910 113 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 Y_RNA.118-201ENST00000363300 101 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 SNORD115-27-201ENST00000364430 82 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 SNORA26.2-201ENST00000390922 122 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 MIR942-201ENST00000401111 86 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 AL161932.1-201ENST00000437408 146 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 SNORD4B-201ENST00000459083 72 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 U7.7-201ENST00000459276 60 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 RN7SKP12-201ENST00000516275 143 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 SNORA72.7-201ENST00000516349 94 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 RNA5SP102-201ENST00000516865 106 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 RNU7-10P-201ENST00000607194 63 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 uc_338.16-201ENST00000621804 95 ntBASIC0.82□□□□□ -2.28
ERVFC1-1P60608 RNU6-1260P-201ENST00000362944 107 ntBASIC0.81□□□□□ -2.28
ERVFC1-1P60608 RNU6-957P-201ENST00000363652 99 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms