Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 U2.22-201ENST00000636441 106 ntBASIC0.65□□□□□ -2.31
SUMO3P55854 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
SUMO3P55854 SNORD114-22-201ENST00000365423 72 ntBASIC0.64□□□□□ -2.31
SUMO3P55854 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
SUMO3P55854 AC141557.1-201ENST00000540982 400 ntBASIC0.64□□□□□ -2.31
SUMO3P55854 MIR6129-201ENST00000616087 109 ntBASIC0.64□□□□□ -2.31
SUMO3P55854 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SUMO3P55854 RNA5SP517-201ENST00000364724 117 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 MIR520E-201ENST00000384867 87 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 Y_RNA.629-201ENST00000411368 105 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 SCARNA16.5-201ENST00000517114 183 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 CYP3A137P-201ENST00000562436 69 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 MIR548AI-201ENST00000579940 88 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 MIR4452-201ENST00000583004 71 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 AC244669.1-204ENST00000621564 178 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 MIR6828-201ENST00000636181 60 ntBASIC0.63□□□□□ -2.31
SUMO3P55854 SNORA36.1-201ENST00000363424 132 ntBASIC0.62□□□□□ -2.31
SUMO3P55854 SNORD115-24-201ENST00000363528 82 ntBASIC0.62□□□□□ -2.31
SUMO3P55854 MIR499A-201ENST00000384903 122 ntBASIC0.62□□□□□ -2.31
SUMO3P55854 SNORA40.8-201ENST00000411034 126 ntBASIC0.62□□□□□ -2.31
SUMO3P55854 Y_RNA.809-201ENST00000516058 95 ntBASIC0.62□□□□□ -2.31
SUMO3P55854 RNU6-589P-201ENST00000516485 107 ntBASIC0.62□□□□□ -2.31
SUMO3P55854 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SUMO3P55854 Y_RNA.10-201ENST00000362371 110 ntBASIC0.61□□□□□ -2.31
SUMO3P55854 MIR599-201ENST00000385069 95 ntBASIC0.61□□□□□ -2.31
SUMO3P55854 SNORA8.2-201ENST00000384372 139 ntBASIC0.6□□□□□ -2.31
SUMO3P55854 RNU7-195P-201ENST00000458793 62 ntBASIC0.6□□□□□ -2.31
SUMO3P55854 RNU7-106P-201ENST00000459514 67 ntBASIC0.6□□□□□ -2.31
SUMO3P55854 Y_RNA.676-201ENST00000516393 96 ntBASIC0.6□□□□□ -2.31
SUMO3P55854 RNA5SP268-201ENST00000516828 124 ntBASIC0.6□□□□□ -2.31
SUMO3P55854 AC091304.10-201ENST00000641554 121 ntBASIC0.6□□□□□ -2.31
SUMO3P55854 RNU6-1260P-201ENST00000362944 107 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 Y_RNA.78-201ENST00000362970 110 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 RNU4-36P-201ENST00000364294 144 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 MIR516A2-201ENST00000384888 90 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 MIR516A1-201ENST00000385033 90 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 RNU6-1254P-201ENST00000391266 104 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 RPS29P1-201ENST00000465274 159 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 MIR4439-201ENST00000583746 80 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.59□□□□□ -2.31
SUMO3P55854 Y_RNA.57-201ENST00000362806 113 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 SNORD118-201ENST00000363593 134 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 RNA5SP403-201ENST00000363598 108 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 RNU6-1163P-201ENST00000364516 107 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 MIR518A1-201ENST00000385068 85 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SUMO3P55854 SNORD71-201ENST00000411292 86 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 Y_RNA.659-201ENST00000515994 113 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 Y_RNA.709-201ENST00000516952 92 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 MIR3613-201ENST00000579844 87 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 MIR151B-201ENST00000584249 96 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 MIR6788-201ENST00000618842 66 ntBASIC0.58□□□□□ -2.32
SUMO3P55854 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SUMO3P55854 RNU6-1290P-201ENST00000362957 109 ntBASIC0.57□□□□□ -2.32
SUMO3P55854 RNU6-1125P-201ENST00000363601 107 ntBASIC0.57□□□□□ -2.32
SUMO3P55854 SNORD45B-201ENST00000364617 72 ntBASIC0.57□□□□□ -2.32
SUMO3P55854 Y_RNA.291-201ENST00000364886 113 ntBASIC0.57□□□□□ -2.32
SUMO3P55854 RNU6-480P-201ENST00000384332 107 ntBASIC0.57□□□□□ -2.32
SUMO3P55854 MIR1302-5-201ENST00000408164 150 ntBASIC0.57□□□□□ -2.32
SUMO3P55854 Y_RNA.601-201ENST00000410500 113 ntBASIC0.57□□□□□ -2.32
SUMO3P55854 RNU7-161P-201ENST00000517289 62 ntBASIC0.57□□□□□ -2.32
SUMO3P55854 Y_RNA.163-201ENST00000363702 113 ntBASIC0.56□□□□□ -2.32
SUMO3P55854 Y_RNA.221-201ENST00000364248 96 ntBASIC0.56□□□□□ -2.32
SUMO3P55854 RNU6-243P-201ENST00000391140 107 ntBASIC0.56□□□□□ -2.32
SUMO3P55854 RNA5SP227-201ENST00000516184 113 ntBASIC0.56□□□□□ -2.32
SUMO3P55854 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
SUMO3P55854 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.56□□□□□ -2.32
SUMO3P55854 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
SUMO3P55854 SNORD36A-201ENST00000362874 73 ntBASIC0.55□□□□□ -2.32
SUMO3P55854 RNU6-1325P-201ENST00000364905 105 ntBASIC0.55□□□□□ -2.32
SUMO3P55854 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
SUMO3P55854 RNU6-106P-201ENST00000384405 107 ntBASIC0.54□□□□□ -2.32
SUMO3P55854 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
SUMO3P55854 AC109327.2-201ENST00000448339 378 ntBASIC0.54□□□□□ -2.32
SUMO3P55854 SNORA25.18-201ENST00000607153 114 ntBASIC0.54□□□□□ -2.32
SUMO3P55854 AC067863.3-201ENST00000624172 122 ntBASIC0.54□□□□□ -2.32
SUMO3P55854 Y_RNA.95-201ENST00000363079 95 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 Y_RNA.224-201ENST00000364308 111 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 RNU6-524P-201ENST00000384270 107 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 RNU6-1113P-201ENST00000384348 107 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 RNU7-104P-201ENST00000459398 79 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 RNU6-904P-201ENST00000516206 101 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 MIR4714-201ENST00000580728 77 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 RNU6-86P-201ENST00000606534 107 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.32
SUMO3P55854 RNU6-1244P-201ENST00000363614 108 ntBASIC0.52□□□□□ -2.33
SUMO3P55854 RNU6-726P-201ENST00000364680 107 ntBASIC0.52□□□□□ -2.33
SUMO3P55854 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.52□□□□□ -2.33
SUMO3P55854 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
SUMO3P55854 MIR181B2-201ENST00000385004 89 ntBASIC0.51□□□□□ -2.33
SUMO3P55854 MIR548L-201ENST00000408303 86 ntBASIC0.51□□□□□ -2.33
SUMO3P55854 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.51□□□□□ -2.33
SUMO3P55854 RNU6-863P-201ENST00000515989 104 ntBASIC0.51□□□□□ -2.33
SUMO3P55854 SCARNA23-201ENST00000516060 130 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms