Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNU6-295P-201ENST00000516901 104 ntBASIC1.92□□□□□ -2.1
EPHA4P54764 MIR4676-201ENST00000583078 72 ntBASIC1.92□□□□□ -2.1
EPHA4P54764 TRDV1-202ENST00000621643 102 ntBASIC1.92□□□□□ -2.1
EPHA4P54764 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
EPHA4P54764 RNU6-161P-201ENST00000363051 106 ntBASIC1.91□□□□□ -2.1
EPHA4P54764 RNY4P3-201ENST00000365254 95 ntBASIC1.91□□□□□ -2.1
EPHA4P54764 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
EPHA4P54764 RNU7-21P-201ENST00000459430 62 ntBASIC1.91□□□□□ -2.1
EPHA4P54764 RNU7-40P-201ENST00000516397 64 ntBASIC1.91□□□□□ -2.1
EPHA4P54764 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
EPHA4P54764 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
EPHA4P54764 AC015712.3-201ENST00000559380 164 ntBASIC1.91□□□□□ -2.1
EPHA4P54764 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
EPHA4P54764 MIRLET7A1-201ENST00000362295 80 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 RNU5F-1-201ENST00000362507 117 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 Y_RNA.545-201ENST00000384652 105 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 RNU6-910P-201ENST00000390844 107 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 AC067940.1-201ENST00000458411 300 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 RNU6-1108P-201ENST00000516308 104 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 RNU6-807P-201ENST00000516805 107 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 RNU6-448P-201ENST00000517052 107 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 AC027335.2-201ENST00000624030 375 ntBASIC1.9□□□□□ -2.11
EPHA4P54764 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
EPHA4P54764 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
EPHA4P54764 RNU6-535P-201ENST00000384722 107 ntBASIC1.89□□□□□ -2.11
EPHA4P54764 MIR599-201ENST00000385069 95 ntBASIC1.89□□□□□ -2.11
EPHA4P54764 MIR764-201ENST00000390811 85 ntBASIC1.89□□□□□ -2.11
EPHA4P54764 RNU6-977P-201ENST00000516411 103 ntBASIC1.89□□□□□ -2.11
EPHA4P54764 MIR4769-201ENST00000584126 77 ntBASIC1.89□□□□□ -2.11
EPHA4P54764 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
EPHA4P54764 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
EPHA4P54764 RNU6-548P-201ENST00000517083 115 ntBASIC1.88□□□□□ -2.11
EPHA4P54764 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
EPHA4P54764 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
EPHA4P54764 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
EPHA4P54764 RNU6-208P-201ENST00000362431 107 ntBASIC1.87□□□□□ -2.11
EPHA4P54764 Y_RNA.363-201ENST00000365529 113 ntBASIC1.87□□□□□ -2.11
EPHA4P54764 SNORD101-201ENST00000384027 73 ntBASIC1.87□□□□□ -2.11
EPHA4P54764 MIR100-201ENST00000385259 80 ntBASIC1.87□□□□□ -2.11
EPHA4P54764 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
EPHA4P54764 AL645939.4-201ENST00000604495 135 ntBASIC1.87□□□□□ -2.11
EPHA4P54764 MIR1297-201ENST00000637311 77 ntBASIC1.87□□□□□ -2.11
EPHA4P54764 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
EPHA4P54764 MIR1-1-201ENST00000362147 71 ntBASIC1.86□□□□□ -2.11
EPHA4P54764 RNU1-119P-201ENST00000391122 165 ntBASIC1.86□□□□□ -2.11
EPHA4P54764 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
EPHA4P54764 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.86□□□□□ -2.11
EPHA4P54764 RNU6-664P-201ENST00000362381 107 ntBASIC1.85□□□□□ -2.11
EPHA4P54764 RNU6-1229P-201ENST00000364295 107 ntBASIC1.85□□□□□ -2.11
EPHA4P54764 Y_RNA.565-201ENST00000384719 101 ntBASIC1.85□□□□□ -2.11
EPHA4P54764 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.85□□□□□ -2.11
EPHA4P54764 RNU7-102P-201ENST00000458948 62 ntBASIC1.85□□□□□ -2.11
EPHA4P54764 SNORD79.1-201ENST00000516069 84 ntBASIC1.85□□□□□ -2.11
EPHA4P54764 SNORA70.22-201ENST00000517160 124 ntBASIC1.85□□□□□ -2.11
EPHA4P54764 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
EPHA4P54764 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
EPHA4P54764 Y_RNA.596-201ENST00000410462 109 ntBASIC1.84□□□□□ -2.11
EPHA4P54764 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
EPHA4P54764 RNU6-291P-201ENST00000384720 107 ntBASIC1.83□□□□□ -2.12
EPHA4P54764 MIR222-201ENST00000384992 110 ntBASIC1.83□□□□□ -2.12
EPHA4P54764 SNORD12-201ENST00000391002 90 ntBASIC1.83□□□□□ -2.12
EPHA4P54764 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.83□□□□□ -2.12
EPHA4P54764 AC008608.1-201ENST00000603910 127 ntBASIC1.83□□□□□ -2.12
EPHA4P54764 RNU6-1057P-201ENST00000517162 102 ntBASIC1.82□□□□□ -2.12
EPHA4P54764 MIR4804-201ENST00000581683 73 ntBASIC1.82□□□□□ -2.12
EPHA4P54764 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
EPHA4P54764 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
EPHA4P54764 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
EPHA4P54764 RNU6-1051P-201ENST00000365471 102 ntBASIC1.81□□□□□ -2.12
EPHA4P54764 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
EPHA4P54764 AL606490.4-201ENST00000423117 127 ntBASIC1.81□□□□□ -2.12
EPHA4P54764 MIR4696-201ENST00000581431 70 ntBASIC1.81□□□□□ -2.12
EPHA4P54764 AL353997.5-201ENST00000618886 171 ntBASIC1.81□□□□□ -2.12
EPHA4P54764 U6.100-201ENST00000636230 99 ntBASIC1.81□□□□□ -2.12
EPHA4P54764 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
EPHA4P54764 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
EPHA4P54764 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.8□□□□□ -2.12
EPHA4P54764 RNU6-935P-201ENST00000410371 100 ntBASIC1.8□□□□□ -2.12
EPHA4P54764 RNU6-303P-201ENST00000517091 106 ntBASIC1.8□□□□□ -2.12
EPHA4P54764 AL359821.1-201ENST00000605519 182 ntBASIC1.8□□□□□ -2.12
EPHA4P54764 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
EPHA4P54764 MIR520F-201ENST00000384824 87 ntBASIC1.79□□□□□ -2.12
EPHA4P54764 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.79□□□□□ -2.12
EPHA4P54764 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
EPHA4P54764 Y_RNA.174-201ENST00000363781 105 ntBASIC1.78□□□□□ -2.12
EPHA4P54764 RNU6-411P-201ENST00000384451 107 ntBASIC1.78□□□□□ -2.12
EPHA4P54764 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.78□□□□□ -2.12
EPHA4P54764 AC244505.6-201ENST00000452829 130 ntBASIC1.78□□□□□ -2.12
EPHA4P54764 Y_RNA.681-201ENST00000516445 113 ntBASIC1.78□□□□□ -2.12
EPHA4P54764 YWHAEP2-201ENST00000580066 112 ntBASIC1.78□□□□□ -2.12
EPHA4P54764 YWHAEP3-201ENST00000582767 121 ntBASIC1.78□□□□□ -2.12
EPHA4P54764 AL157834.3-201ENST00000615543 103 ntBASIC1.78□□□□□ -2.12
EPHA4P54764 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
EPHA4P54764 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.78□□□□□ -2.12
EPHA4P54764 Y_RNA.12-201ENST00000362393 112 ntBASIC1.77□□□□□ -2.13
EPHA4P54764 MIR9-3-201ENST00000385084 90 ntBASIC1.77□□□□□ -2.13
EPHA4P54764 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.77□□□□□ -2.13
EPHA4P54764 RNU7-56P-201ENST00000458744 62 ntBASIC1.77□□□□□ -2.13
EPHA4P54764 Y_RNA.207-201ENST00000364142 106 ntBASIC1.76□□□□□ -2.13
EPHA4P54764 SNORD115-44-201ENST00000365391 82 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 352.5 ms