Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.94□□□□□ -2.26
COPB1P53618 BX276092.1-201ENST00000427368 251 ntBASIC0.94□□□□□ -2.26
COPB1P53618 AC025627.3-201ENST00000582078 182 ntBASIC0.94□□□□□ -2.26
COPB1P53618 MIR4777-201ENST00000583710 86 ntBASIC0.94□□□□□ -2.26
COPB1P53618 MIR548Z-201ENST00000584743 97 ntBASIC0.94□□□□□ -2.26
COPB1P53618 AC012531.4-201ENST00000616509 177 ntBASIC0.94□□□□□ -2.26
COPB1P53618 RNU6-170P-201ENST00000362832 104 ntBASIC0.93□□□□□ -2.26
COPB1P53618 Y_RNA.95-201ENST00000363079 95 ntBASIC0.93□□□□□ -2.26
COPB1P53618 SNORD45B-201ENST00000364617 72 ntBASIC0.93□□□□□ -2.26
COPB1P53618 SNORD100-201ENST00000408573 76 ntBASIC0.93□□□□□ -2.26
COPB1P53618 SPINT5P-201ENST00000448174 155 ntBASIC0.93□□□□□ -2.26
COPB1P53618 AC109327.2-201ENST00000448339 378 ntBASIC0.93□□□□□ -2.26
COPB1P53618 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.93□□□□□ -2.26
COPB1P53618 Y_RNA.659-201ENST00000515994 113 ntBASIC0.93□□□□□ -2.26
COPB1P53618 RNU6-448P-201ENST00000517052 107 ntBASIC0.93□□□□□ -2.26
COPB1P53618 MTND5P40-201ENST00000559945 246 ntBASIC0.93□□□□□ -2.26
COPB1P53618 MIR4439-201ENST00000583746 80 ntBASIC0.93□□□□□ -2.26
COPB1P53618 Y_RNA.56-201ENST00000362798 112 ntBASIC0.92□□□□□ -2.26
COPB1P53618 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
COPB1P53618 RNU6-32P-201ENST00000383948 107 ntBASIC0.92□□□□□ -2.26
COPB1P53618 RNU6-13P-201ENST00000384248 107 ntBASIC0.92□□□□□ -2.26
COPB1P53618 Y_RNA.495-201ENST00000384435 112 ntBASIC0.92□□□□□ -2.26
COPB1P53618 RNU6-12P-201ENST00000384604 107 ntBASIC0.92□□□□□ -2.26
COPB1P53618 Y_RNA.536-201ENST00000384621 113 ntBASIC0.92□□□□□ -2.26
COPB1P53618 Y_RNA.544-201ENST00000384650 113 ntBASIC0.92□□□□□ -2.26
COPB1P53618 RNU6-291P-201ENST00000384720 107 ntBASIC0.92□□□□□ -2.26
COPB1P53618 RNU6-41P-201ENST00000384741 107 ntBASIC0.92□□□□□ -2.26
COPB1P53618 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
COPB1P53618 RNU6-795P-201ENST00000516323 103 ntBASIC0.92□□□□□ -2.26
COPB1P53618 RNU6-850P-201ENST00000516934 103 ntBASIC0.92□□□□□ -2.26
COPB1P53618 AP001318.4-201ENST00000616637 121 ntBASIC0.92□□□□□ -2.26
COPB1P53618 Y_RNA.93-201ENST00000363066 109 ntBASIC0.91□□□□□ -2.26
COPB1P53618 Y_RNA.567-201ENST00000384736 106 ntBASIC0.91□□□□□ -2.26
COPB1P53618 AC004941.2-201ENST00000427009 228 ntBASIC0.91□□□□□ -2.26
COPB1P53618 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
COPB1P53618 Y_RNA.697-201ENST00000516776 113 ntBASIC0.91□□□□□ -2.26
COPB1P53618 RNU6-158P-201ENST00000517104 100 ntBASIC0.91□□□□□ -2.26
COPB1P53618 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
COPB1P53618 MIR6779-201ENST00000617283 64 ntBASIC0.91□□□□□ -2.26
COPB1P53618 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.91□□□□□ -2.26
COPB1P53618 RNU6-1244P-201ENST00000363614 108 ntBASIC0.9□□□□□ -2.27
COPB1P53618 Y_RNA.348-201ENST00000365403 103 ntBASIC0.9□□□□□ -2.27
COPB1P53618 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
COPB1P53618 AC002350.1-201ENST00000490759 375 ntBASIC0.9□□□□□ -2.27
COPB1P53618 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
COPB1P53618 uc_338.16-201ENST00000621804 95 ntBASIC0.9□□□□□ -2.27
COPB1P53618 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
COPB1P53618 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
COPB1P53618 MIR101-2-201ENST00000362195 79 ntBASIC0.89□□□□□ -2.27
COPB1P53618 RNA5SP245-201ENST00000364239 121 ntBASIC0.89□□□□□ -2.27
COPB1P53618 Y_RNA.467-201ENST00000384297 102 ntBASIC0.89□□□□□ -2.27
COPB1P53618 MIR573-201ENST00000384964 99 ntBASIC0.89□□□□□ -2.27
COPB1P53618 AC092628.1-201ENST00000436250 252 ntBASIC0.89□□□□□ -2.27
COPB1P53618 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
COPB1P53618 TRAJ51-201ENST00000504127 63 ntBASIC0.89□□□□□ -2.27
COPB1P53618 RNU6-168P-201ENST00000516189 101 ntBASIC0.89□□□□□ -2.27
COPB1P53618 MIR548H5-201ENST00000580314 60 ntBASIC0.89□□□□□ -2.27
COPB1P53618 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
COPB1P53618 RNU6-86P-201ENST00000606534 107 ntBASIC0.89□□□□□ -2.27
COPB1P53618 Y_RNA.342-201ENST00000365352 113 ntBASIC0.88□□□□□ -2.27
COPB1P53618 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
COPB1P53618 RNU6-813P-201ENST00000384691 107 ntBASIC0.88□□□□□ -2.27
COPB1P53618 RNU6-535P-201ENST00000384722 107 ntBASIC0.88□□□□□ -2.27
COPB1P53618 SNORD99-201ENST00000408612 74 ntBASIC0.88□□□□□ -2.27
COPB1P53618 RNA5SP89-201ENST00000410300 108 ntBASIC0.88□□□□□ -2.27
COPB1P53618 MTATP6P29-201ENST00000415057 132 ntBASIC0.88□□□□□ -2.27
COPB1P53618 MTATP8P2-201ENST00000435212 202 ntBASIC0.88□□□□□ -2.27
COPB1P53618 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
COPB1P53618 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.88□□□□□ -2.27
COPB1P53618 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
COPB1P53618 Y_RNA.32-201ENST00000362589 110 ntBASIC0.87□□□□□ -2.27
COPB1P53618 Y_RNA.107-201ENST00000363190 121 ntBASIC0.87□□□□□ -2.27
COPB1P53618 MIR635-201ENST00000384830 98 ntBASIC0.87□□□□□ -2.27
COPB1P53618 MIR216A-201ENST00000385063 110 ntBASIC0.87□□□□□ -2.27
COPB1P53618 MIR519A1-201ENST00000385257 85 ntBASIC0.87□□□□□ -2.27
COPB1P53618 AC244098.3-201ENST00000424803 96 ntBASIC0.87□□□□□ -2.27
COPB1P53618 RNU7-106P-201ENST00000459514 67 ntBASIC0.87□□□□□ -2.27
COPB1P53618 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.87□□□□□ -2.27
COPB1P53618 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
COPB1P53618 RNU6-640P-201ENST00000363693 105 ntBASIC0.86□□□□□ -2.27
COPB1P53618 RNU6-905P-201ENST00000384434 107 ntBASIC0.86□□□□□ -2.27
COPB1P53618 RNU6-644P-201ENST00000391155 98 ntBASIC0.86□□□□□ -2.27
COPB1P53618 SNORD63B-201ENST00000411005 70 ntBASIC0.86□□□□□ -2.27
COPB1P53618 SNORA31.14-201ENST00000516728 116 ntBASIC0.86□□□□□ -2.27
COPB1P53618 RN7SL793P-201ENST00000583259 296 ntBASIC0.86□□□□□ -2.27
COPB1P53618 RNU7-10P-201ENST00000607194 63 ntBASIC0.86□□□□□ -2.27
COPB1P53618 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
COPB1P53618 MIR181B2-201ENST00000385004 89 ntBASIC0.85□□□□□ -2.27
COPB1P53618 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
COPB1P53618 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
COPB1P53618 SNORA40.13-201ENST00000516379 120 ntBASIC0.85□□□□□ -2.27
COPB1P53618 MIR3612-201ENST00000579753 87 ntBASIC0.85□□□□□ -2.27
COPB1P53618 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
COPB1P53618 Y_RNA.57-201ENST00000362806 113 ntBASIC0.84□□□□□ -2.27
COPB1P53618 RNU6-1125P-201ENST00000363601 107 ntBASIC0.84□□□□□ -2.27
COPB1P53618 Y_RNA.174-201ENST00000363781 105 ntBASIC0.84□□□□□ -2.27
COPB1P53618 RNU6-480P-201ENST00000384332 107 ntBASIC0.84□□□□□ -2.27
COPB1P53618 MIR516A2-201ENST00000384888 90 ntBASIC0.84□□□□□ -2.27
COPB1P53618 MIR516A1-201ENST00000385033 90 ntBASIC0.84□□□□□ -2.27
COPB1P53618 AC244505.6-201ENST00000452829 130 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms