Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 AP003327.1-201ENST00000529684 127 ntBASIC1.03□□□□□ -2.24
NPTX2P47972 MIR6504-201ENST00000613520 61 ntBASIC1.03□□□□□ -2.24
NPTX2P47972 MIR2052-201ENST00000636055 55 ntBASIC1.03□□□□□ -2.24
NPTX2P47972 SNORA25.9-201ENST00000365087 128 ntBASIC1.02□□□□□ -2.25
NPTX2P47972 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
NPTX2P47972 RNA5SP255-201ENST00000516370 107 ntBASIC1.02□□□□□ -2.25
NPTX2P47972 Y_RNA.705-201ENST00000516862 110 ntBASIC1.02□□□□□ -2.25
NPTX2P47972 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 Y_RNA.56-201ENST00000362798 112 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 SNORD114-22-201ENST00000365423 72 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 Y_RNA.536-201ENST00000384621 113 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 RNU6-291P-201ENST00000384720 107 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 RNU6-448P-201ENST00000517052 107 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 MIR3973-201ENST00000579824 107 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.01□□□□□ -2.25
NPTX2P47972 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 AC103810.7-201ENST00000607821 91 ntBASIC1.01□□□□□ -2.25
NPTX2P47972 RNU6-1298P-201ENST00000362456 101 ntBASIC1□□□□□ -2.25
NPTX2P47972 Y_RNA.57-201ENST00000362806 113 ntBASIC1□□□□□ -2.25
NPTX2P47972 Y_RNA.96-201ENST00000363092 109 ntBASIC1□□□□□ -2.25
NPTX2P47972 Y_RNA.342-201ENST00000365352 113 ntBASIC1□□□□□ -2.25
NPTX2P47972 MIR488-201ENST00000365739 83 ntBASIC1□□□□□ -2.25
NPTX2P47972 MIR181B2-201ENST00000385004 89 ntBASIC1□□□□□ -2.25
NPTX2P47972 MIR548H5-201ENST00000580314 60 ntBASIC1□□□□□ -2.25
NPTX2P47972 RNU6-1125P-201ENST00000363601 107 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 RNU6-480P-201ENST00000384332 107 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 RNU6-535P-201ENST00000384722 107 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 RNU6-972P-201ENST00000391208 107 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 RNU6-887P-201ENST00000410660 100 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 TRAJ51-201ENST00000504127 63 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 Y_RNA.694-201ENST00000516677 117 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 AC025627.3-201ENST00000582078 182 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 U7.3-201ENST00000616123 62 ntBASIC0.99□□□□□ -2.25
NPTX2P47972 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
NPTX2P47972 MIR635-201ENST00000384830 98 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 MIR499A-201ENST00000384903 122 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 SNORD63B-201ENST00000411005 70 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 AC092628.1-201ENST00000436250 252 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 RNU6-162P-201ENST00000516228 103 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 RNU7-10P-201ENST00000607194 63 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 MALAT1.1-201ENST00000618249 95 ntBASIC0.98□□□□□ -2.25
NPTX2P47972 Y_RNA.32-201ENST00000362589 110 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 RNA5SP245-201ENST00000364239 121 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 Y_RNA.290-201ENST00000364879 114 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 MIR516A2-201ENST00000384888 90 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 MIR516A1-201ENST00000385033 90 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 RNY4P30-201ENST00000410216 95 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 RNU7-106P-201ENST00000459514 67 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 AC025521.1-201ENST00000621624 286 ntBASIC0.97□□□□□ -2.25
NPTX2P47972 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
NPTX2P47972 AC002350.1-201ENST00000490759 375 ntBASIC0.96□□□□□ -2.26
NPTX2P47972 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
NPTX2P47972 RNA5SP170-201ENST00000517150 101 ntBASIC0.96□□□□□ -2.26
NPTX2P47972 uc_338.16-201ENST00000621804 95 ntBASIC0.96□□□□□ -2.26
NPTX2P47972 Y_RNA.191-201ENST00000363972 113 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 Y_RNA.226-201ENST00000364337 114 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 SNORD58A-201ENST00000383875 65 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 MIR573-201ENST00000384964 99 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 MIR519A1-201ENST00000385257 85 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 SNORD99-201ENST00000408612 74 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 RNA5SP247-201ENST00000411181 105 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.95□□□□□ -2.26
NPTX2P47972 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 SNORA31.14-201ENST00000516728 116 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 AL513043.2-201ENST00000573941 143 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 MIR4452-201ENST00000583004 71 ntBASIC0.95□□□□□ -2.26
NPTX2P47972 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
NPTX2P47972 SNORD36A-201ENST00000362874 73 ntBASIC0.94□□□□□ -2.26
NPTX2P47972 RNU6-1131P-201ENST00000364955 107 ntBASIC0.94□□□□□ -2.26
NPTX2P47972 RNU6-1254P-201ENST00000391266 104 ntBASIC0.94□□□□□ -2.26
NPTX2P47972 RNU7-195P-201ENST00000458793 62 ntBASIC0.94□□□□□ -2.26
NPTX2P47972 AC138907.6-201ENST00000568401 126 ntBASIC0.94□□□□□ -2.26
NPTX2P47972 AC138869.1-201ENST00000568623 124 ntBASIC0.94□□□□□ -2.26
NPTX2P47972 Y_RNA.174-201ENST00000363781 105 ntBASIC0.93□□□□□ -2.26
NPTX2P47972 SNORD116-10-201ENST00000363791 102 ntBASIC0.93□□□□□ -2.26
NPTX2P47972 RNU6-49P-201ENST00000384256 107 ntBASIC0.93□□□□□ -2.26
NPTX2P47972 RNY1P7-201ENST00000384743 110 ntBASIC0.93□□□□□ -2.26
NPTX2P47972 MIR5582-201ENST00000579697 68 ntBASIC0.93□□□□□ -2.26
NPTX2P47972 Y_RNA.190-201ENST00000363964 101 ntBASIC0.92□□□□□ -2.26
NPTX2P47972 Y_RNA.220-201ENST00000364244 109 ntBASIC0.92□□□□□ -2.26
NPTX2P47972 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
NPTX2P47972 RNU6-243P-201ENST00000391140 107 ntBASIC0.92□□□□□ -2.26
NPTX2P47972 AC097635.1-201ENST00000450678 155 ntBASIC0.92□□□□□ -2.26
NPTX2P47972 Y_RNA.809-201ENST00000516058 95 ntBASIC0.92□□□□□ -2.26
NPTX2P47972 MIR3612-201ENST00000579753 87 ntBASIC0.92□□□□□ -2.26
NPTX2P47972 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.92□□□□□ -2.26
NPTX2P47972 RNA5SP117-201ENST00000365294 118 ntBASIC0.91□□□□□ -2.26
NPTX2P47972 MIR1287-201ENST00000408492 90 ntBASIC0.91□□□□□ -2.26
NPTX2P47972 AC244098.3-201ENST00000424803 96 ntBASIC0.91□□□□□ -2.26
NPTX2P47972 AC244505.6-201ENST00000452829 130 ntBASIC0.91□□□□□ -2.26
NPTX2P47972 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
NPTX2P47972 AC011195.1-201ENST00000578177 177 ntBASIC0.91□□□□□ -2.26
NPTX2P47972 AL353765.1-201ENST00000605514 183 ntBASIC0.91□□□□□ -2.26
NPTX2P47972 RNU6-1260P-201ENST00000362944 107 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 262 ms