Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC012493.3-201ENST00000604494 112 ntBASIC2.03□□□□□ -2.08
RFC5P40937 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.03□□□□□ -2.08
RFC5P40937 AC019288.1-201ENST00000557918 224 ntBASIC2.02□□□□□ -2.09
RFC5P40937 AC104996.3-201ENST00000590718 94 ntBASIC2.02□□□□□ -2.09
RFC5P40937 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFC5P40937 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RFC5P40937 SNORA16.1-201ENST00000364597 132 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU6-535P-201ENST00000384722 107 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU6-129P-201ENST00000391022 107 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU1-119P-201ENST00000391122 165 ntBASIC2.01□□□□□ -2.09
RFC5P40937 AC108210.2-201ENST00000503681 201 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU6-548P-201ENST00000517083 115 ntBASIC2.01□□□□□ -2.09
RFC5P40937 AC015712.3-201ENST00000559380 164 ntBASIC2.01□□□□□ -2.09
RFC5P40937 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.01□□□□□ -2.09
RFC5P40937 MIR4804-201ENST00000581683 73 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU7-102P-201ENST00000458948 62 ntBASIC2□□□□□ -2.09
RFC5P40937 MIR3064-201ENST00000581130 66 ntBASIC2□□□□□ -2.09
RFC5P40937 MIR4712-201ENST00000583750 82 ntBASIC2□□□□□ -2.09
RFC5P40937 AC084768.2-201ENST00000622736 221 ntBASIC2□□□□□ -2.09
RFC5P40937 RNA5SP432-201ENST00000362480 116 ntBASIC1.99□□□□□ -2.09
RFC5P40937 RNU6-315P-201ENST00000362666 107 ntBASIC1.99□□□□□ -2.09
RFC5P40937 Y_RNA.491-201ENST00000384417 107 ntBASIC1.99□□□□□ -2.09
RFC5P40937 SNORA18.5-201ENST00000516616 101 ntBASIC1.99□□□□□ -2.09
RFC5P40937 TRDV1-202ENST00000621643 102 ntBASIC1.99□□□□□ -2.09
RFC5P40937 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RFC5P40937 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
RFC5P40937 MIR599-201ENST00000385069 95 ntBASIC1.98□□□□□ -2.09
RFC5P40937 RNA5SP292-201ENST00000390974 118 ntBASIC1.98□□□□□ -2.09
RFC5P40937 MIR4781-201ENST00000585250 76 ntBASIC1.98□□□□□ -2.09
RFC5P40937 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFC5P40937 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RFC5P40937 Y_RNA.94-201ENST00000363068 106 ntBASIC1.97□□□□□ -2.09
RFC5P40937 RNU6-624P-201ENST00000363411 107 ntBASIC1.97□□□□□ -2.09
RFC5P40937 MIR518E-201ENST00000385252 88 ntBASIC1.97□□□□□ -2.09
RFC5P40937 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.97□□□□□ -2.09
RFC5P40937 AL359821.1-201ENST00000605519 182 ntBASIC1.97□□□□□ -2.09
RFC5P40937 MIR4662A-201ENST00000637499 67 ntBASIC1.97□□□□□ -2.09
RFC5P40937 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFC5P40937 RNU6-369P-201ENST00000362515 102 ntBASIC1.96□□□□□ -2.1
RFC5P40937 RNU6-132P-201ENST00000383863 107 ntBASIC1.96□□□□□ -2.1
RFC5P40937 RNU6-291P-201ENST00000384720 107 ntBASIC1.96□□□□□ -2.1
RFC5P40937 RNU6-380P-201ENST00000410207 107 ntBASIC1.96□□□□□ -2.1
RFC5P40937 RNU7-56P-201ENST00000458744 62 ntBASIC1.96□□□□□ -2.1
RFC5P40937 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
RFC5P40937 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
RFC5P40937 MIRLET7F1-201ENST00000362202 87 ntBASIC1.95□□□□□ -2.1
RFC5P40937 SNORA25.9-201ENST00000365087 128 ntBASIC1.95□□□□□ -2.1
RFC5P40937 MIR520F-201ENST00000384824 87 ntBASIC1.95□□□□□ -2.1
RFC5P40937 RNU6-482P-201ENST00000391068 107 ntBASIC1.95□□□□□ -2.1
RFC5P40937 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.95□□□□□ -2.1
RFC5P40937 MIR1827-201ENST00000408549 66 ntBASIC1.95□□□□□ -2.1
RFC5P40937 AC008608.1-201ENST00000603910 127 ntBASIC1.95□□□□□ -2.1
RFC5P40937 Y_RNA.239-201ENST00000364444 113 ntBASIC1.94□□□□□ -2.1
RFC5P40937 SNORA25-201ENST00000384384 134 ntBASIC1.94□□□□□ -2.1
RFC5P40937 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RFC5P40937 FGF7P7-201ENST00000514120 227 ntBASIC1.94□□□□□ -2.1
RFC5P40937 Y_RNA.660-201ENST00000516002 120 ntBASIC1.94□□□□□ -2.1
RFC5P40937 SNORA25.15-201ENST00000516487 89 ntBASIC1.94□□□□□ -2.1
RFC5P40937 RNU6-557P-201ENST00000516842 110 ntBASIC1.94□□□□□ -2.1
RFC5P40937 MIR4419B-201ENST00000577260 68 ntBASIC1.94□□□□□ -2.1
RFC5P40937 MIR4769-201ENST00000584126 77 ntBASIC1.94□□□□□ -2.1
RFC5P40937 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFC5P40937 AC002429.1-201ENST00000437672 148 ntBASIC1.93□□□□□ -2.1
RFC5P40937 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC5P40937 AL136317.1-201ENST00000612653 226 ntBASIC1.93□□□□□ -2.1
RFC5P40937 SNORA63.2-201ENST00000362603 126 ntBASIC1.92□□□□□ -2.1
RFC5P40937 RNU6-1296P-201ENST00000383879 107 ntBASIC1.92□□□□□ -2.1
RFC5P40937 AL450471.1-201ENST00000447509 127 ntBASIC1.92□□□□□ -2.1
RFC5P40937 MIR3122-201ENST00000577243 73 ntBASIC1.92□□□□□ -2.1
RFC5P40937 AL157834.3-201ENST00000615543 103 ntBASIC1.92□□□□□ -2.1
RFC5P40937 RNU6-1094P-201ENST00000362416 104 ntBASIC1.91□□□□□ -2.1
RFC5P40937 Y_RNA.174-201ENST00000363781 105 ntBASIC1.91□□□□□ -2.1
RFC5P40937 SNORD101-201ENST00000384027 73 ntBASIC1.91□□□□□ -2.1
RFC5P40937 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RFC5P40937 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
RFC5P40937 AL353997.5-201ENST00000618886 171 ntBASIC1.91□□□□□ -2.1
RFC5P40937 Y_RNA.221-201ENST00000364248 96 ntBASIC1.9□□□□□ -2.11
RFC5P40937 AL606490.4-201ENST00000423117 127 ntBASIC1.9□□□□□ -2.11
RFC5P40937 AC244505.6-201ENST00000452829 130 ntBASIC1.9□□□□□ -2.11
RFC5P40937 MIR502-201ENST00000606349 86 ntBASIC1.9□□□□□ -2.11
RFC5P40937 RNU6-664P-201ENST00000362381 107 ntBASIC1.89□□□□□ -2.11
RFC5P40937 RNA5SP245-201ENST00000364239 121 ntBASIC1.89□□□□□ -2.11
RFC5P40937 RNA5SP190-201ENST00000365222 118 ntBASIC1.89□□□□□ -2.11
RFC5P40937 Y_RNA.596-201ENST00000410462 109 ntBASIC1.89□□□□□ -2.11
RFC5P40937 RNA5SP327-201ENST00000362494 101 ntBASIC1.88□□□□□ -2.11
RFC5P40937 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
RFC5P40937 RNU6-478P-201ENST00000363904 110 ntBASIC1.88□□□□□ -2.11
RFC5P40937 RNU6-686P-201ENST00000364839 107 ntBASIC1.88□□□□□ -2.11
RFC5P40937 FABP5P4-201ENST00000437203 171 ntBASIC1.88□□□□□ -2.11
RFC5P40937 RMST_2.1-201ENST00000617263 136 ntBASIC1.88□□□□□ -2.11
RFC5P40937 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFC5P40937 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RFC5P40937 RNA5SP99-201ENST00000364020 114 ntBASIC1.87□□□□□ -2.11
RFC5P40937 Y_RNA.264-201ENST00000364665 102 ntBASIC1.87□□□□□ -2.11
RFC5P40937 RNY4P3-201ENST00000365254 95 ntBASIC1.87□□□□□ -2.11
RFC5P40937 U6.100-201ENST00000636230 99 ntBASIC1.87□□□□□ -2.11
RFC5P40937 RNU6-161P-201ENST00000363051 106 ntBASIC1.86□□□□□ -2.11
RFC5P40937 RNU6-776P-201ENST00000364403 104 ntBASIC1.86□□□□□ -2.11
RFC5P40937 RNU6-1022P-201ENST00000365049 104 ntBASIC1.86□□□□□ -2.11
RFC5P40937 SNORD77.2-201ENST00000391045 68 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms