Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC012493.3-201ENST00000604494 112 ntBASIC2.03□□□□□ -2.08
RFC5P40937 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.03□□□□□ -2.08
RFC5P40937 AC019288.1-201ENST00000557918 224 ntBASIC2.02□□□□□ -2.09
RFC5P40937 AC104996.3-201ENST00000590718 94 ntBASIC2.02□□□□□ -2.09
RFC5P40937 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFC5P40937 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RFC5P40937 SNORA16.1-201ENST00000364597 132 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU6-535P-201ENST00000384722 107 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU6-129P-201ENST00000391022 107 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU1-119P-201ENST00000391122 165 ntBASIC2.01□□□□□ -2.09
RFC5P40937 AC108210.2-201ENST00000503681 201 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU6-548P-201ENST00000517083 115 ntBASIC2.01□□□□□ -2.09
RFC5P40937 AC015712.3-201ENST00000559380 164 ntBASIC2.01□□□□□ -2.09
RFC5P40937 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.01□□□□□ -2.09
RFC5P40937 MIR4804-201ENST00000581683 73 ntBASIC2.01□□□□□ -2.09
RFC5P40937 RNU7-102P-201ENST00000458948 62 ntBASIC2□□□□□ -2.09
RFC5P40937 MIR3064-201ENST00000581130 66 ntBASIC2□□□□□ -2.09
RFC5P40937 MIR4712-201ENST00000583750 82 ntBASIC2□□□□□ -2.09
RFC5P40937 AC084768.2-201ENST00000622736 221 ntBASIC2□□□□□ -2.09
RFC5P40937 RNA5SP432-201ENST00000362480 116 ntBASIC1.99□□□□□ -2.09
RFC5P40937 RNU6-315P-201ENST00000362666 107 ntBASIC1.99□□□□□ -2.09
RFC5P40937 Y_RNA.491-201ENST00000384417 107 ntBASIC1.99□□□□□ -2.09
RFC5P40937 SNORA18.5-201ENST00000516616 101 ntBASIC1.99□□□□□ -2.09
RFC5P40937 TRDV1-202ENST00000621643 102 ntBASIC1.99□□□□□ -2.09
RFC5P40937 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RFC5P40937 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
RFC5P40937 MIR599-201ENST00000385069 95 ntBASIC1.98□□□□□ -2.09
RFC5P40937 RNA5SP292-201ENST00000390974 118 ntBASIC1.98□□□□□ -2.09
RFC5P40937 MIR4781-201ENST00000585250 76 ntBASIC1.98□□□□□ -2.09
RFC5P40937 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFC5P40937 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RFC5P40937 Y_RNA.94-201ENST00000363068 106 ntBASIC1.97□□□□□ -2.09
RFC5P40937 RNU6-624P-201ENST00000363411 107 ntBASIC1.97□□□□□ -2.09
RFC5P40937 MIR518E-201ENST00000385252 88 ntBASIC1.97□□□□□ -2.09
RFC5P40937 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.97□□□□□ -2.09
RFC5P40937 AL359821.1-201ENST00000605519 182 ntBASIC1.97□□□□□ -2.09
RFC5P40937 MIR4662A-201ENST00000637499 67 ntBASIC1.97□□□□□ -2.09
RFC5P40937 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFC5P40937 RNU6-369P-201ENST00000362515 102 ntBASIC1.96□□□□□ -2.1
RFC5P40937 RNU6-132P-201ENST00000383863 107 ntBASIC1.96□□□□□ -2.1
RFC5P40937 RNU6-291P-201ENST00000384720 107 ntBASIC1.96□□□□□ -2.1
RFC5P40937 RNU6-380P-201ENST00000410207 107 ntBASIC1.96□□□□□ -2.1
RFC5P40937 RNU7-56P-201ENST00000458744 62 ntBASIC1.96□□□□□ -2.1
RFC5P40937 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
RFC5P40937 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
RFC5P40937 MIRLET7F1-201ENST00000362202 87 ntBASIC1.95□□□□□ -2.1
RFC5P40937 SNORA25.9-201ENST00000365087 128 ntBASIC1.95□□□□□ -2.1
RFC5P40937 MIR520F-201ENST00000384824 87 ntBASIC1.95□□□□□ -2.1
RFC5P40937 RNU6-482P-201ENST00000391068 107 ntBASIC1.95□□□□□ -2.1
RFC5P40937 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.95□□□□□ -2.1
RFC5P40937 MIR1827-201ENST00000408549 66 ntBASIC1.95□□□□□ -2.1
RFC5P40937 AC008608.1-201ENST00000603910 127 ntBASIC1.95□□□□□ -2.1
RFC5P40937 Y_RNA.239-201ENST00000364444 113 ntBASIC1.94□□□□□ -2.1
RFC5P40937 SNORA25-201ENST00000384384 134 ntBASIC1.94□□□□□ -2.1
RFC5P40937 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RFC5P40937 FGF7P7-201ENST00000514120 227 ntBASIC1.94□□□□□ -2.1
RFC5P40937 Y_RNA.660-201ENST00000516002 120 ntBASIC1.94□□□□□ -2.1
RFC5P40937 SNORA25.15-201ENST00000516487 89 ntBASIC1.94□□□□□ -2.1
RFC5P40937 RNU6-557P-201ENST00000516842 110 ntBASIC1.94□□□□□ -2.1
RFC5P40937 MIR4419B-201ENST00000577260 68 ntBASIC1.94□□□□□ -2.1
RFC5P40937 MIR4769-201ENST00000584126 77 ntBASIC1.94□□□□□ -2.1
RFC5P40937 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RFC5P40937 AC002429.1-201ENST00000437672 148 ntBASIC1.93□□□□□ -2.1
RFC5P40937 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC5P40937 AL136317.1-201ENST00000612653 226 ntBASIC1.93□□□□□ -2.1
RFC5P40937 SNORA63.2-201ENST00000362603 126 ntBASIC1.92□□□□□ -2.1
RFC5P40937 RNU6-1296P-201ENST00000383879 107 ntBASIC1.92□□□□□ -2.1
RFC5P40937 AL450471.1-201ENST00000447509 127 ntBASIC1.92□□□□□ -2.1
RFC5P40937 MIR3122-201ENST00000577243 73 ntBASIC1.92□□□□□ -2.1
RFC5P40937 AL157834.3-201ENST00000615543 103 ntBASIC1.92□□□□□ -2.1
RFC5P40937 RNU6-1094P-201ENST00000362416 104 ntBASIC1.91□□□□□ -2.1
RFC5P40937 Y_RNA.174-201ENST00000363781 105 ntBASIC1.91□□□□□ -2.1
RFC5P40937 SNORD101-201ENST00000384027 73 ntBASIC1.91□□□□□ -2.1
RFC5P40937 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RFC5P40937 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
RFC5P40937 AL353997.5-201ENST00000618886 171 ntBASIC1.91□□□□□ -2.1
RFC5P40937 Y_RNA.221-201ENST00000364248 96 ntBASIC1.9□□□□□ -2.11
RFC5P40937 AL606490.4-201ENST00000423117 127 ntBASIC1.9□□□□□ -2.11
RFC5P40937 AC244505.6-201ENST00000452829 130 ntBASIC1.9□□□□□ -2.11
RFC5P40937 MIR502-201ENST00000606349 86 ntBASIC1.9□□□□□ -2.11
RFC5P40937 RNU6-664P-201ENST00000362381 107 ntBASIC1.89□□□□□ -2.11
RFC5P40937 RNA5SP245-201ENST00000364239 121 ntBASIC1.89□□□□□ -2.11
RFC5P40937 RNA5SP190-201ENST00000365222 118 ntBASIC1.89□□□□□ -2.11
RFC5P40937 Y_RNA.596-201ENST00000410462 109 ntBASIC1.89□□□□□ -2.11
RFC5P40937 RNA5SP327-201ENST00000362494 101 ntBASIC1.88□□□□□ -2.11
RFC5P40937 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
RFC5P40937 RNU6-478P-201ENST00000363904 110 ntBASIC1.88□□□□□ -2.11
RFC5P40937 RNU6-686P-201ENST00000364839 107 ntBASIC1.88□□□□□ -2.11
RFC5P40937 FABP5P4-201ENST00000437203 171 ntBASIC1.88□□□□□ -2.11
RFC5P40937 RMST_2.1-201ENST00000617263 136 ntBASIC1.88□□□□□ -2.11
RFC5P40937 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFC5P40937 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RFC5P40937 RNA5SP99-201ENST00000364020 114 ntBASIC1.87□□□□□ -2.11
RFC5P40937 Y_RNA.264-201ENST00000364665 102 ntBASIC1.87□□□□□ -2.11
RFC5P40937 RNY4P3-201ENST00000365254 95 ntBASIC1.87□□□□□ -2.11
RFC5P40937 U6.100-201ENST00000636230 99 ntBASIC1.87□□□□□ -2.11
RFC5P40937 RNU6-161P-201ENST00000363051 106 ntBASIC1.86□□□□□ -2.11
RFC5P40937 RNU6-776P-201ENST00000364403 104 ntBASIC1.86□□□□□ -2.11
RFC5P40937 RNU6-1022P-201ENST00000365049 104 ntBASIC1.86□□□□□ -2.11
RFC5P40937 SNORD77.2-201ENST00000391045 68 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms