Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SNORD38B-201ENST00000384690 67 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 MIR889-201ENST00000401280 79 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 RNU6-613P-201ENST00000410412 108 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 RNU7-48P-201ENST00000458875 63 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.05□□□□□ -2.24
HOXC13P31276 SNORD111.1-201ENST00000516421 86 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 AL513043.2-201ENST00000573941 143 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 AL096861.1-201ENST00000610899 123 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 SNORD38B-202ENST00000625943 69 ntBASIC1.05□□□□□ -2.24
HOXC13P31276 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
HOXC13P31276 RNY1P13-201ENST00000365030 105 ntBASIC1.04□□□□□ -2.24
HOXC13P31276 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.04□□□□□ -2.24
HOXC13P31276 RNA5SP237-201ENST00000410414 113 ntBASIC1.04□□□□□ -2.24
HOXC13P31276 RNU6-65P-201ENST00000516332 98 ntBASIC1.04□□□□□ -2.24
HOXC13P31276 AC211469.2-201ENST00000605461 205 ntBASIC1.04□□□□□ -2.24
HOXC13P31276 Y_RNA.30-201ENST00000362572 97 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 Y_RNA.94-201ENST00000363068 106 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 Y_RNA.173-201ENST00000363776 113 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 Y_RNA.316-201ENST00000365118 111 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 SNORD38.2-201ENST00000384470 69 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 Y_RNA.607-201ENST00000410597 98 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 RNU7-153P-201ENST00000516455 62 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 AC141846.1-201ENST00000568348 142 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 MIR4500-201ENST00000579472 76 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
HOXC13P31276 AC008163.1-202ENST00000636004 2889 ntBASIC1.03□□□□□ -2.24
HOXC13P31276 RNU6-776P-201ENST00000364403 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-1022P-201ENST00000365049 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-1296P-201ENST00000383879 107 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 SNORA2B-201ENST00000384583 137 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 MIR519C-201ENST00000385053 87 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-447P-201ENST00000410293 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-1118P-201ENST00000410382 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-1076P-201ENST00000410397 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-355P-201ENST00000410427 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-791P-201ENST00000410467 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-705P-201ENST00000410601 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-1100P-201ENST00000410691 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-860P-201ENST00000410860 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-1217P-201ENST00000411276 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU6-785P-201ENST00000411324 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 AC244023.1-201ENST00000426884 112 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 AC093729.1-201ENST00000513074 128 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 CYP3A137P-201ENST00000562436 69 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 AC133485.1-201ENST00000567176 124 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 MIR3192-201ENST00000584920 77 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 AC242498.1-201ENST00000604134 111 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 U6.90-201ENST00000614007 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 U6.70-201ENST00000620287 104 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 AP001362.1-201ENST00000625165 124 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 MIR4662A-201ENST00000637499 67 ntBASIC1.02□□□□□ -2.25
HOXC13P31276 SNORA25.3-201ENST00000363205 127 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 RNU4-32P-201ENST00000363404 141 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 Y_RNA.168-201ENST00000363740 102 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 RNU6-480P-201ENST00000384332 107 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 RNU6-519P-201ENST00000410590 108 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 AL161932.1-201ENST00000437408 146 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 RNU7-21P-201ENST00000459430 62 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.01□□□□□ -2.25
HOXC13P31276 AC090897.1-201ENST00000580909 226 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.01□□□□□ -2.25
HOXC13P31276 AL662814.1-201ENST00000617364 121 ntBASIC1.01□□□□□ -2.25
HOXC13P31276 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
HOXC13P31276 SNORD115-37-201ENST00000363768 82 ntBASIC1□□□□□ -2.25
HOXC13P31276 MIR588-201ENST00000384900 83 ntBASIC1□□□□□ -2.25
HOXC13P31276 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
HOXC13P31276 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
HOXC13P31276 RNU4-83P-201ENST00000410863 133 ntBASIC1□□□□□ -2.25
HOXC13P31276 BX276092.1-201ENST00000427368 251 ntBASIC1□□□□□ -2.25
HOXC13P31276 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
HOXC13P31276 RNA5SP264-201ENST00000363115 107 ntBASIC0.99□□□□□ -2.25
HOXC13P31276 RNU6-949P-201ENST00000384040 107 ntBASIC0.99□□□□□ -2.25
HOXC13P31276 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.99□□□□□ -2.25
HOXC13P31276 AC087499.7-201ENST00000441958 109 ntBASIC0.99□□□□□ -2.25
HOXC13P31276 snoU13.2-201ENST00000459201 104 ntBASIC0.99□□□□□ -2.25
HOXC13P31276 AC138749.4-201ENST00000563970 127 ntBASIC0.99□□□□□ -2.25
HOXC13P31276 RN7SL793P-201ENST00000583259 296 ntBASIC0.99□□□□□ -2.25
HOXC13P31276 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
HOXC13P31276 MIR8066-201ENST00000617280 78 ntBASIC0.99□□□□□ -2.25
HOXC13P31276 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.99□□□□□ -2.25
HOXC13P31276 U6.109-201ENST00000636749 87 ntBASIC0.99□□□□□ -2.25
HOXC13P31276 HSBP1P2-201ENST00000299671 229 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 Y_RNA.57-201ENST00000362806 113 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 RNA5SP133-201ENST00000363368 119 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 RNY1P2-201ENST00000364820 117 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
HOXC13P31276 RNU6-205P-201ENST00000390858 107 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 RNU6-850P-201ENST00000516934 103 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 AC140658.3-201ENST00000567603 271 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 MIR4714-201ENST00000580728 77 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 MIR4712-201ENST00000583750 82 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 MIR4653-201ENST00000585107 83 ntBASIC0.98□□□□□ -2.25
HOXC13P31276 Y_RNA.119-201ENST00000363301 96 ntBASIC0.97□□□□□ -2.25
HOXC13P31276 SNORA75.2-201ENST00000391138 150 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 380.3 ms