Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
SHC1P29353 RNU6-765P-201ENST00000516916 99 ntBASIC0.65□□□□□ -2.31
SHC1P29353 MTND5P40-201ENST00000559945 246 ntBASIC0.65□□□□□ -2.31
SHC1P29353 AC025627.3-201ENST00000582078 182 ntBASIC0.65□□□□□ -2.31
SHC1P29353 RNU6-86P-201ENST00000606534 107 ntBASIC0.65□□□□□ -2.31
SHC1P29353 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
SHC1P29353 AC022709.1-201ENST00000615967 87 ntBASIC0.65□□□□□ -2.31
SHC1P29353 Y_RNA.118-201ENST00000363300 101 ntBASIC0.64□□□□□ -2.31
SHC1P29353 RNU4-36P-201ENST00000364294 144 ntBASIC0.64□□□□□ -2.31
SHC1P29353 Y_RNA.536-201ENST00000384621 113 ntBASIC0.64□□□□□ -2.31
SHC1P29353 RNU6-291P-201ENST00000384720 107 ntBASIC0.64□□□□□ -2.31
SHC1P29353 SNORD100-201ENST00000408573 76 ntBASIC0.64□□□□□ -2.31
SHC1P29353 SNRPGP12-201ENST00000449481 213 ntBASIC0.64□□□□□ -2.31
SHC1P29353 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.64□□□□□ -2.31
SHC1P29353 TRAJ51-201ENST00000504127 63 ntBASIC0.64□□□□□ -2.31
SHC1P29353 SCARNA23-201ENST00000516060 130 ntBASIC0.64□□□□□ -2.31
SHC1P29353 RNU6-1194P-201ENST00000516208 104 ntBASIC0.64□□□□□ -2.31
SHC1P29353 Y_RNA.697-201ENST00000516776 113 ntBASIC0.64□□□□□ -2.31
SHC1P29353 RNU6-850P-201ENST00000516934 103 ntBASIC0.64□□□□□ -2.31
SHC1P29353 RNU6-448P-201ENST00000517052 107 ntBASIC0.64□□□□□ -2.31
SHC1P29353 MIR4777-201ENST00000583710 86 ntBASIC0.64□□□□□ -2.31
SHC1P29353 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
SHC1P29353 MIR101-2-201ENST00000362195 79 ntBASIC0.63□□□□□ -2.31
SHC1P29353 RNU6-170P-201ENST00000362832 104 ntBASIC0.63□□□□□ -2.31
SHC1P29353 Y_RNA.467-201ENST00000384297 102 ntBASIC0.63□□□□□ -2.31
SHC1P29353 RNU6-1113P-201ENST00000384348 107 ntBASIC0.63□□□□□ -2.31
SHC1P29353 Y_RNA.567-201ENST00000384736 106 ntBASIC0.63□□□□□ -2.31
SHC1P29353 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
SHC1P29353 RNU7-106P-201ENST00000459514 67 ntBASIC0.63□□□□□ -2.31
SHC1P29353 AC002350.1-201ENST00000490759 375 ntBASIC0.63□□□□□ -2.31
SHC1P29353 Y_RNA.659-201ENST00000515994 113 ntBASIC0.63□□□□□ -2.31
SHC1P29353 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
SHC1P29353 AC096720.1-201ENST00000604441 183 ntBASIC0.63□□□□□ -2.31
SHC1P29353 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
SHC1P29353 uc_338.16-201ENST00000621804 95 ntBASIC0.63□□□□□ -2.31
SHC1P29353 Y_RNA.56-201ENST00000362798 112 ntBASIC0.62□□□□□ -2.31
SHC1P29353 Y_RNA.95-201ENST00000363079 95 ntBASIC0.62□□□□□ -2.31
SHC1P29353 SNORD38.2-201ENST00000384470 69 ntBASIC0.62□□□□□ -2.31
SHC1P29353 RNU6-535P-201ENST00000384722 107 ntBASIC0.62□□□□□ -2.31
SHC1P29353 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
SHC1P29353 AC244098.3-201ENST00000424803 96 ntBASIC0.62□□□□□ -2.31
SHC1P29353 SNORA31.14-201ENST00000516728 116 ntBASIC0.62□□□□□ -2.31
SHC1P29353 AC011195.1-201ENST00000578177 177 ntBASIC0.62□□□□□ -2.31
SHC1P29353 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
SHC1P29353 AP001318.4-201ENST00000616637 121 ntBASIC0.62□□□□□ -2.31
SHC1P29353 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.62□□□□□ -2.31
SHC1P29353 Y_RNA.10-201ENST00000362371 110 ntBASIC0.61□□□□□ -2.31
SHC1P29353 Y_RNA.32-201ENST00000362589 110 ntBASIC0.61□□□□□ -2.31
SHC1P29353 SNORD45B-201ENST00000364617 72 ntBASIC0.61□□□□□ -2.31
SHC1P29353 RNU6-571P-201ENST00000384128 107 ntBASIC0.61□□□□□ -2.31
SHC1P29353 Y_RNA.466-201ENST00000384294 113 ntBASIC0.61□□□□□ -2.31
SHC1P29353 Y_RNA.495-201ENST00000384435 112 ntBASIC0.61□□□□□ -2.31
SHC1P29353 MIR635-201ENST00000384830 98 ntBASIC0.61□□□□□ -2.31
SHC1P29353 MIR516A2-201ENST00000384888 90 ntBASIC0.61□□□□□ -2.31
SHC1P29353 MIR489-201ENST00000384923 84 ntBASIC0.61□□□□□ -2.31
SHC1P29353 MIR573-201ENST00000384964 99 ntBASIC0.61□□□□□ -2.31
SHC1P29353 MIR516A1-201ENST00000385033 90 ntBASIC0.61□□□□□ -2.31
SHC1P29353 AP003327.1-201ENST00000529684 127 ntBASIC0.61□□□□□ -2.31
SHC1P29353 AL353765.1-201ENST00000605514 183 ntBASIC0.61□□□□□ -2.31
SHC1P29353 Y_RNA.342-201ENST00000365352 113 ntBASIC0.6□□□□□ -2.31
SHC1P29353 Y_RNA.348-201ENST00000365403 103 ntBASIC0.6□□□□□ -2.31
SHC1P29353 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SHC1P29353 MIR181B2-201ENST00000385004 89 ntBASIC0.6□□□□□ -2.31
SHC1P29353 MIR644A-201ENST00000385262 94 ntBASIC0.6□□□□□ -2.31
SHC1P29353 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.6□□□□□ -2.31
SHC1P29353 SNORD63B-201ENST00000411005 70 ntBASIC0.6□□□□□ -2.31
SHC1P29353 AC092628.1-201ENST00000436250 252 ntBASIC0.6□□□□□ -2.31
SHC1P29353 AC138907.6-201ENST00000568401 126 ntBASIC0.6□□□□□ -2.31
SHC1P29353 MIR3612-201ENST00000579753 87 ntBASIC0.6□□□□□ -2.31
SHC1P29353 Y_RNA.818-201ENST00000618813 71 ntBASIC0.6□□□□□ -2.31
SHC1P29353 Y_RNA.93-201ENST00000363066 109 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNU6-1244P-201ENST00000363614 108 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNA5SP117-201ENST00000365294 118 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNU6-32P-201ENST00000383948 107 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNU6-13P-201ENST00000384248 107 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNU6-12P-201ENST00000384604 107 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNU6-41P-201ENST00000384741 107 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNU6-644P-201ENST00000391155 98 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNA5SP89-201ENST00000410300 108 ntBASIC0.59□□□□□ -2.31
SHC1P29353 RNU7-61P-201ENST00000515897 61 ntBASIC0.59□□□□□ -2.31
SHC1P29353 MIR548H5-201ENST00000580314 60 ntBASIC0.59□□□□□ -2.31
SHC1P29353 MIR7111-201ENST00000619751 72 ntBASIC0.59□□□□□ -2.31
SHC1P29353 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
SHC1P29353 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
SHC1P29353 SNORD36A-201ENST00000362874 73 ntBASIC0.58□□□□□ -2.32
SHC1P29353 RNU6-905P-201ENST00000384434 107 ntBASIC0.58□□□□□ -2.32
SHC1P29353 Y_RNA.544-201ENST00000384650 113 ntBASIC0.58□□□□□ -2.32
SHC1P29353 RNU6-813P-201ENST00000384691 107 ntBASIC0.58□□□□□ -2.32
SHC1P29353 MTATP8P2-201ENST00000435212 202 ntBASIC0.58□□□□□ -2.32
SHC1P29353 RNU7-195P-201ENST00000458793 62 ntBASIC0.58□□□□□ -2.32
SHC1P29353 RNU6-168P-201ENST00000516189 101 ntBASIC0.58□□□□□ -2.32
SHC1P29353 MIR4439-201ENST00000583746 80 ntBASIC0.58□□□□□ -2.32
SHC1P29353 AL590095.2-201ENST00000604136 117 ntBASIC0.58□□□□□ -2.32
SHC1P29353 AC103810.7-201ENST00000607821 91 ntBASIC0.58□□□□□ -2.32
SHC1P29353 MIR18A-201ENST00000362310 71 ntBASIC0.57□□□□□ -2.32
SHC1P29353 Y_RNA.57-201ENST00000362806 113 ntBASIC0.57□□□□□ -2.32
SHC1P29353 Y_RNA.107-201ENST00000363190 121 ntBASIC0.57□□□□□ -2.32
SHC1P29353 RNU6-640P-201ENST00000363693 105 ntBASIC0.57□□□□□ -2.32
SHC1P29353 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
SHC1P29353 MIR3678-201ENST00000578455 94 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 250.7 ms