Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.74□□□□□ -2.53
USF1P22415 SNORD56B-201ENST00000384713 71 ntBASIC-0.74□□□□□ -2.53
USF1P22415 MT-TW-201ENST00000387382 68 ntBASIC-0.74□□□□□ -2.53
USF1P22415 MIR196A1-201ENST00000388006 70 ntBASIC-0.74□□□□□ -2.53
USF1P22415 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.74□□□□□ -2.53
USF1P22415 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.74□□□□□ -2.53
USF1P22415 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.74□□□□□ -2.53
USF1P22415 RNA5SP331-201ENST00000364986 107 ntBASIC-0.75□□□□□ -2.53
USF1P22415 RNU6-639P-201ENST00000384074 107 ntBASIC-0.75□□□□□ -2.53
USF1P22415 MT-TY-201ENST00000387409 66 ntBASIC-0.75□□□□□ -2.53
USF1P22415 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.75□□□□□ -2.53
USF1P22415 MIR2113-201ENST00000459007 91 ntBASIC-0.75□□□□□ -2.53
USF1P22415 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.75□□□□□ -2.53
USF1P22415 MIR4460-201ENST00000577862 86 ntBASIC-0.75□□□□□ -2.53
USF1P22415 AC009779.6-201ENST00000603972 165 ntBASIC-0.75□□□□□ -2.53
USF1P22415 MIR376B-201ENST00000614515 100 ntBASIC-0.75□□□□□ -2.53
USF1P22415 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.76□□□□□ -2.53
USF1P22415 RNU6-818P-201ENST00000364837 108 ntBASIC-0.76□□□□□ -2.53
USF1P22415 RNY4P28-201ENST00000365281 93 ntBASIC-0.76□□□□□ -2.53
USF1P22415 SNORA33.2-201ENST00000365413 134 ntBASIC-0.76□□□□□ -2.53
USF1P22415 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.76□□□□□ -2.53
USF1P22415 SNORA51.5-201ENST00000384126 131 ntBASIC-0.76□□□□□ -2.53
USF1P22415 RNU6-900P-201ENST00000384498 102 ntBASIC-0.76□□□□□ -2.53
USF1P22415 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.77□□□□□ -2.53
USF1P22415 SNORD115-35-201ENST00000365122 82 ntBASIC-0.77□□□□□ -2.53
USF1P22415 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.77□□□□□ -2.53
USF1P22415 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.77□□□□□ -2.53
USF1P22415 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.77□□□□□ -2.53
USF1P22415 RNU6-635P-201ENST00000516651 102 ntBASIC-0.77□□□□□ -2.53
USF1P22415 MIR4280-201ENST00000582178 76 ntBASIC-0.77□□□□□ -2.53
USF1P22415 AC145423.2-201ENST00000610631 239 ntBASIC-0.77□□□□□ -2.53
USF1P22415 U4.1-201ENST00000620349 87 ntBASIC-0.77□□□□□ -2.53
USF1P22415 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.78□□□□□ -2.53
USF1P22415 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.78□□□□□ -2.53
USF1P22415 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.78□□□□□ -2.53
USF1P22415 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.78□□□□□ -2.53
USF1P22415 RNU6-768P-201ENST00000384683 107 ntBASIC-0.78□□□□□ -2.53
USF1P22415 RNA5SP266-201ENST00000410273 108 ntBASIC-0.78□□□□□ -2.53
USF1P22415 RNU6-287P-201ENST00000516230 98 ntBASIC-0.78□□□□□ -2.53
USF1P22415 RNU6-850P-201ENST00000516934 103 ntBASIC-0.78□□□□□ -2.53
USF1P22415 RNY1P9-201ENST00000532431 109 ntBASIC-0.78□□□□□ -2.53
USF1P22415 AC087741.2-201ENST00000619415 172 ntBASIC-0.78□□□□□ -2.53
USF1P22415 MIR20A-201ENST00000362279 71 ntBASIC-0.79□□□□□ -2.54
USF1P22415 RNY1P7-201ENST00000384743 110 ntBASIC-0.79□□□□□ -2.54
USF1P22415 MIR516A2-201ENST00000384888 90 ntBASIC-0.79□□□□□ -2.54
USF1P22415 MIR516A1-201ENST00000385033 90 ntBASIC-0.79□□□□□ -2.54
USF1P22415 SNORA49-201ENST00000386157 136 ntBASIC-0.79□□□□□ -2.54
USF1P22415 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
USF1P22415 AL445193.1-201ENST00000441183 141 ntBASIC-0.79□□□□□ -2.54
USF1P22415 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.79□□□□□ -2.54
USF1P22415 AC007012.1-201ENST00000567192 175 ntBASIC-0.79□□□□□ -2.54
USF1P22415 MIR4308-201ENST00000580634 81 ntBASIC-0.79□□□□□ -2.54
USF1P22415 RNU6-238P-201ENST00000363313 106 ntBASIC-0.8□□□□□ -2.54
USF1P22415 RNU6-616P-201ENST00000384353 107 ntBASIC-0.8□□□□□ -2.54
USF1P22415 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.8□□□□□ -2.54
USF1P22415 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.8□□□□□ -2.54
USF1P22415 AP000676.1-201ENST00000533307 52 ntBASIC-0.8□□□□□ -2.54
USF1P22415 U6.106-201ENST00000636360 105 ntBASIC-0.8□□□□□ -2.54
USF1P22415 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.81□□□□□ -2.54
USF1P22415 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.81□□□□□ -2.54
USF1P22415 SNORA75.5-201ENST00000391291 81 ntBASIC-0.81□□□□□ -2.54
USF1P22415 MIR548H3-201ENST00000408771 118 ntBASIC-0.81□□□□□ -2.54
USF1P22415 AC244090.1-201ENST00000441884 93 ntBASIC-0.81□□□□□ -2.54
USF1P22415 AL500527.2-201ENST00000454105 95 ntBASIC-0.81□□□□□ -2.54
USF1P22415 RNU7-55P-201ENST00000459426 62 ntBASIC-0.81□□□□□ -2.54
USF1P22415 MIR3149-201ENST00000584629 83 ntBASIC-0.81□□□□□ -2.54
USF1P22415 MIR6851-201ENST00000617060 67 ntBASIC-0.81□□□□□ -2.54
USF1P22415 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.82□□□□□ -2.54
USF1P22415 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.82□□□□□ -2.54
USF1P22415 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.82□□□□□ -2.54
USF1P22415 MIR34C-201ENST00000384831 77 ntBASIC-0.82□□□□□ -2.54
USF1P22415 MIR652-201ENST00000385278 98 ntBASIC-0.82□□□□□ -2.54
USF1P22415 SNORD18B-201ENST00000365659 72 ntBASIC-0.83□□□□□ -2.54
USF1P22415 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.83□□□□□ -2.54
USF1P22415 SNORD83B-201ENST00000386745 93 ntBASIC-0.83□□□□□ -2.54
USF1P22415 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.83□□□□□ -2.54
USF1P22415 snoU13.13-201ENST00000458842 104 ntBASIC-0.83□□□□□ -2.54
USF1P22415 AC021146.6-201ENST00000514659 117 ntBASIC-0.83□□□□□ -2.54
USF1P22415 SNORD38.3-201ENST00000516599 73 ntBASIC-0.83□□□□□ -2.54
USF1P22415 RNU6-881P-201ENST00000516813 102 ntBASIC-0.83□□□□□ -2.54
USF1P22415 RNU6-86P-201ENST00000606534 107 ntBASIC-0.83□□□□□ -2.54
USF1P22415 TRDV1-202ENST00000621643 102 ntBASIC-0.83□□□□□ -2.54
USF1P22415 U6.100-201ENST00000636230 99 ntBASIC-0.83□□□□□ -2.54
USF1P22415 SNORD114-25-201ENST00000363742 72 ntBASIC-0.84□□□□□ -2.54
USF1P22415 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.84□□□□□ -2.54
USF1P22415 SNORD38.2-201ENST00000384470 69 ntBASIC-0.84□□□□□ -2.54
USF1P22415 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.84□□□□□ -2.54
USF1P22415 MIR204-201ENST00000385200 110 ntBASIC-0.84□□□□□ -2.54
USF1P22415 AL161932.1-201ENST00000437408 146 ntBASIC-0.84□□□□□ -2.54
USF1P22415 AC107027.2-201ENST00000512197 115 ntBASIC-0.84□□□□□ -2.54
USF1P22415 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.84□□□□□ -2.54
USF1P22415 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.85□□□□□ -2.55
USF1P22415 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.85□□□□□ -2.55
USF1P22415 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.85□□□□□ -2.55
USF1P22415 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.85□□□□□ -2.55
USF1P22415 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.85□□□□□ -2.55
USF1P22415 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.85□□□□□ -2.55
USF1P22415 RNU6-901P-201ENST00000384593 106 ntBASIC-0.85□□□□□ -2.55
USF1P22415 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.85□□□□□ -2.55
USF1P22415 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 290.9 ms