Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MIR101-2-201ENST00000362195 79 ntBASIC1.75□□□□□ -2.13
LIG1P18858 Y_RNA.13-201ENST00000362403 112 ntBASIC1.75□□□□□ -2.13
LIG1P18858 RNU6-315P-201ENST00000362666 107 ntBASIC1.75□□□□□ -2.13
LIG1P18858 Y_RNA.56-201ENST00000362798 112 ntBASIC1.75□□□□□ -2.13
LIG1P18858 Y_RNA.363-201ENST00000365529 113 ntBASIC1.75□□□□□ -2.13
LIG1P18858 Y_RNA.536-201ENST00000384621 113 ntBASIC1.75□□□□□ -2.13
LIG1P18858 RNU6-75P-201ENST00000515944 104 ntBASIC1.75□□□□□ -2.13
LIG1P18858 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
LIG1P18858 RNU1-42P-201ENST00000364033 160 ntBASIC1.74□□□□□ -2.13
LIG1P18858 RNU6-811P-201ENST00000384069 107 ntBASIC1.74□□□□□ -2.13
LIG1P18858 MIR125B2-201ENST00000385128 89 ntBASIC1.74□□□□□ -2.13
LIG1P18858 RNU6-466P-201ENST00000391224 103 ntBASIC1.74□□□□□ -2.13
LIG1P18858 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.74□□□□□ -2.13
LIG1P18858 AL591704.2-201ENST00000421658 181 ntBASIC1.74□□□□□ -2.13
LIG1P18858 TRAJ51-201ENST00000504127 63 ntBASIC1.74□□□□□ -2.13
LIG1P18858 AL645939.4-201ENST00000604495 135 ntBASIC1.74□□□□□ -2.13
LIG1P18858 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
LIG1P18858 SNORD26-201ENST00000384147 75 ntBASIC1.73□□□□□ -2.13
LIG1P18858 RNU6-129P-201ENST00000391022 107 ntBASIC1.73□□□□□ -2.13
LIG1P18858 AL603825.1-201ENST00000438481 80 ntBASIC1.73□□□□□ -2.13
LIG1P18858 RNA5SP61-201ENST00000516453 100 ntBASIC1.73□□□□□ -2.13
LIG1P18858 MIR4796-201ENST00000580742 81 ntBASIC1.73□□□□□ -2.13
LIG1P18858 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
LIG1P18858 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LIG1P18858 Y_RNA.42-201ENST00000362660 108 ntBASIC1.72□□□□□ -2.13
LIG1P18858 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
LIG1P18858 RPS26P5-201ENST00000418544 335 ntBASIC1.72□□□□□ -2.13
LIG1P18858 RNU7-21P-201ENST00000459430 62 ntBASIC1.72□□□□□ -2.13
LIG1P18858 SNORD92-201ENST00000585078 85 ntBASIC1.72□□□□□ -2.13
LIG1P18858 RNU6-776P-201ENST00000364403 104 ntBASIC1.71□□□□□ -2.14
LIG1P18858 RNU6-1022P-201ENST00000365049 104 ntBASIC1.71□□□□□ -2.14
LIG1P18858 SNORA80D-201ENST00000384488 135 ntBASIC1.71□□□□□ -2.14
LIG1P18858 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
LIG1P18858 RNU6-557P-201ENST00000516842 110 ntBASIC1.71□□□□□ -2.14
LIG1P18858 MIR4771-2-201ENST00000577758 74 ntBASIC1.71□□□□□ -2.14
LIG1P18858 MIR4771-1-201ENST00000582617 74 ntBASIC1.71□□□□□ -2.14
LIG1P18858 RNU6-957P-201ENST00000363652 99 ntBASIC1.7□□□□□ -2.14
LIG1P18858 RNA5SP292-201ENST00000390974 118 ntBASIC1.7□□□□□ -2.14
LIG1P18858 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
LIG1P18858 AC092628.1-201ENST00000436250 252 ntBASIC1.7□□□□□ -2.14
LIG1P18858 RNU7-195P-201ENST00000458793 62 ntBASIC1.7□□□□□ -2.14
LIG1P18858 RNU7-156P-201ENST00000517214 74 ntBASIC1.7□□□□□ -2.14
LIG1P18858 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
LIG1P18858 MIR3064-201ENST00000581130 66 ntBASIC1.7□□□□□ -2.14
LIG1P18858 AC104996.3-201ENST00000590718 94 ntBASIC1.7□□□□□ -2.14
LIG1P18858 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LIG1P18858 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LIG1P18858 RNU6-1260P-201ENST00000362944 107 ntBASIC1.69□□□□□ -2.14
LIG1P18858 RNU6-478P-201ENST00000363904 110 ntBASIC1.69□□□□□ -2.14
LIG1P18858 RNU6-132P-201ENST00000383863 107 ntBASIC1.69□□□□□ -2.14
LIG1P18858 MIR548U-201ENST00000390728 81 ntBASIC1.69□□□□□ -2.14
LIG1P18858 Y_RNA.809-201ENST00000516058 95 ntBASIC1.69□□□□□ -2.14
LIG1P18858 SNORA18.5-201ENST00000516616 101 ntBASIC1.69□□□□□ -2.14
LIG1P18858 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.69□□□□□ -2.14
LIG1P18858 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.69□□□□□ -2.14
LIG1P18858 SNORA63.2-201ENST00000362603 126 ntBASIC1.68□□□□□ -2.14
LIG1P18858 RNU7-40P-201ENST00000516397 64 ntBASIC1.68□□□□□ -2.14
LIG1P18858 RNU6-448P-201ENST00000517052 107 ntBASIC1.68□□□□□ -2.14
LIG1P18858 AC023827.1-201ENST00000569247 97 ntBASIC1.68□□□□□ -2.14
LIG1P18858 SNORA25.8-201ENST00000364831 128 ntBASIC1.67□□□□□ -2.14
LIG1P18858 MIR518E-201ENST00000385252 88 ntBASIC1.67□□□□□ -2.14
LIG1P18858 RNU6-910P-201ENST00000390844 107 ntBASIC1.67□□□□□ -2.14
LIG1P18858 SNORA67.5-201ENST00000391036 107 ntBASIC1.67□□□□□ -2.14
LIG1P18858 AL354695.1-201ENST00000427935 228 ntBASIC1.67□□□□□ -2.14
LIG1P18858 AC015818.7-201ENST00000428754 109 ntBASIC1.67□□□□□ -2.14
LIG1P18858 AL450471.1-201ENST00000447509 127 ntBASIC1.67□□□□□ -2.14
LIG1P18858 RNU7-90P-201ENST00000459216 62 ntBASIC1.67□□□□□ -2.14
LIG1P18858 SNORD79.1-201ENST00000516069 84 ntBASIC1.67□□□□□ -2.14
LIG1P18858 Y_RNA.697-201ENST00000516776 113 ntBASIC1.67□□□□□ -2.14
LIG1P18858 MIR4676-201ENST00000583078 72 ntBASIC1.67□□□□□ -2.14
LIG1P18858 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LIG1P18858 Y_RNA.491-201ENST00000384417 107 ntBASIC1.66□□□□□ -2.14
LIG1P18858 AC097635.1-201ENST00000450678 155 ntBASIC1.66□□□□□ -2.14
LIG1P18858 Y_RNA.660-201ENST00000516002 120 ntBASIC1.66□□□□□ -2.14
LIG1P18858 RNU1-92P-201ENST00000517017 135 ntBASIC1.66□□□□□ -2.14
LIG1P18858 AC138907.6-201ENST00000568401 126 ntBASIC1.66□□□□□ -2.14
LIG1P18858 AC138869.1-201ENST00000568623 124 ntBASIC1.66□□□□□ -2.14
LIG1P18858 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
LIG1P18858 RNU6-369P-201ENST00000362515 102 ntBASIC1.65□□□□□ -2.15
LIG1P18858 MIR150-201ENST00000385048 84 ntBASIC1.65□□□□□ -2.15
LIG1P18858 MIR517C-201ENST00000385103 95 ntBASIC1.65□□□□□ -2.15
LIG1P18858 MIR938-201ENST00000401216 83 ntBASIC1.65□□□□□ -2.15
LIG1P18858 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.65□□□□□ -2.15
LIG1P18858 FGF7P7-201ENST00000514120 227 ntBASIC1.65□□□□□ -2.15
LIG1P18858 RNU6-1053P-201ENST00000515930 101 ntBASIC1.65□□□□□ -2.15
LIG1P18858 MIRLET7F1-201ENST00000362202 87 ntBASIC1.64□□□□□ -2.15
LIG1P18858 MIR337-201ENST00000362281 93 ntBASIC1.64□□□□□ -2.15
LIG1P18858 RNU6-1094P-201ENST00000362416 104 ntBASIC1.64□□□□□ -2.15
LIG1P18858 RNU6-686P-201ENST00000364839 107 ntBASIC1.64□□□□□ -2.15
LIG1P18858 RNA5SP247-201ENST00000411181 105 ntBASIC1.64□□□□□ -2.15
LIG1P18858 AC145423.2-201ENST00000610631 239 ntBASIC1.64□□□□□ -2.15
LIG1P18858 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.64□□□□□ -2.15
LIG1P18858 TRDV1-202ENST00000621643 102 ntBASIC1.64□□□□□ -2.15
LIG1P18858 AC027335.2-201ENST00000624030 375 ntBASIC1.64□□□□□ -2.15
LIG1P18858 MIRLET7A1-201ENST00000362295 80 ntBASIC1.63□□□□□ -2.15
LIG1P18858 Y_RNA.164-201ENST00000363709 102 ntBASIC1.63□□□□□ -2.15
LIG1P18858 SNORA25.9-201ENST00000365087 128 ntBASIC1.63□□□□□ -2.15
LIG1P18858 RNU6-364P-201ENST00000384387 107 ntBASIC1.63□□□□□ -2.15
LIG1P18858 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
LIG1P18858 MIR7974-201ENST00000615835 79 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms