Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SNORD127-201ENST00000458892 86 ntBASIC-0.7□□□□□ -2.52
NCK1P16333 AC107027.2-201ENST00000512197 115 ntBASIC-0.7□□□□□ -2.52
NCK1P16333 AL391099.1-201ENST00000624635 187 ntBASIC-0.7□□□□□ -2.52
NCK1P16333 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.7□□□□□ -2.52
NCK1P16333 RNU6-312P-201ENST00000364629 107 ntBASIC-0.71□□□□□ -2.52
NCK1P16333 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.71□□□□□ -2.52
NCK1P16333 RNA5SP205-201ENST00000364653 136 ntBASIC-0.72□□□□□ -2.52
NCK1P16333 SNORD114-29-201ENST00000364819 70 ntBASIC-0.72□□□□□ -2.52
NCK1P16333 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.72□□□□□ -2.52
NCK1P16333 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.72□□□□□ -2.52
NCK1P16333 AL117351.2-201ENST00000513571 157 ntBASIC-0.72□□□□□ -2.52
NCK1P16333 AL590491.3-201ENST00000610731 82 ntBASIC-0.72□□□□□ -2.52
NCK1P16333 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 U8.6-201ENST00000364939 135 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 RNU6-867P-201ENST00000364956 107 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 MIR519E-201ENST00000385075 84 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
NCK1P16333 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
NCK1P16333 MIR376B-201ENST00000614515 100 ntBASIC-0.73□□□□□ -2.53
NCK1P16333 SNORD18B-201ENST00000365659 72 ntBASIC-0.74□□□□□ -2.53
NCK1P16333 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.74□□□□□ -2.53
NCK1P16333 MTATP8P1-201ENST00000467115 207 ntBASIC-0.74□□□□□ -2.53
NCK1P16333 AC009779.6-201ENST00000603972 165 ntBASIC-0.74□□□□□ -2.53
NCK1P16333 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.75□□□□□ -2.53
NCK1P16333 RNU2-38P-201ENST00000410856 79 ntBASIC-0.75□□□□□ -2.53
NCK1P16333 RNU7-106P-201ENST00000459514 67 ntBASIC-0.75□□□□□ -2.53
NCK1P16333 RNU7-188P-201ENST00000517063 64 ntBASIC-0.75□□□□□ -2.53
NCK1P16333 MIR548AG2-201ENST00000581228 64 ntBASIC-0.75□□□□□ -2.53
NCK1P16333 MIR6844-201ENST00000637122 62 ntBASIC-0.75□□□□□ -2.53
NCK1P16333 RNU6-797P-201ENST00000363101 109 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 SNORD38.2-201ENST00000384470 69 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 RNU4-71P-201ENST00000516258 113 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 RNU6-850P-201ENST00000516934 103 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 AL117187.1-201ENST00000555482 181 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 YWHAEP2-201ENST00000580066 112 ntBASIC-0.76□□□□□ -2.53
NCK1P16333 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.77□□□□□ -2.53
NCK1P16333 RNU6-616P-201ENST00000384353 107 ntBASIC-0.77□□□□□ -2.53
NCK1P16333 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.77□□□□□ -2.53
NCK1P16333 RNU6-918P-201ENST00000391219 106 ntBASIC-0.77□□□□□ -2.53
NCK1P16333 MTND2P23-201ENST00000422990 651 ntBASIC-0.77□□□□□ -2.53
NCK1P16333 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.77□□□□□ -2.53
NCK1P16333 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.77□□□□□ -2.53
NCK1P16333 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.78□□□□□ -2.53
NCK1P16333 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.78□□□□□ -2.53
NCK1P16333 MIR4460-201ENST00000577862 86 ntBASIC-0.78□□□□□ -2.53
NCK1P16333 AC087741.2-201ENST00000619415 172 ntBASIC-0.78□□□□□ -2.53
NCK1P16333 SNORD114-11-201ENST00000363738 75 ntBASIC-0.79□□□□□ -2.54
NCK1P16333 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.79□□□□□ -2.54
NCK1P16333 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.79□□□□□ -2.54
NCK1P16333 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.79□□□□□ -2.54
NCK1P16333 MIR4473-201ENST00000583731 91 ntBASIC-0.79□□□□□ -2.54
NCK1P16333 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.8□□□□□ -2.54
NCK1P16333 MIR2113-201ENST00000459007 91 ntBASIC-0.8□□□□□ -2.54
NCK1P16333 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.8□□□□□ -2.54
NCK1P16333 AL137067.1-201ENST00000615933 120 ntBASIC-0.8□□□□□ -2.54
NCK1P16333 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 SNORD115-19-201ENST00000363098 82 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 SNORD115-18-201ENST00000363293 82 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 SNORD115-17-201ENST00000364612 82 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 RNU6-480P-201ENST00000384332 107 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 RNY1P7-201ENST00000384743 110 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 MT-TY-201ENST00000387409 66 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 AC114755.3-201ENST00000481111 251 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 RNU7-121P-201ENST00000516604 62 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 RNY4P20-201ENST00000516678 93 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 RNA5SP66-201ENST00000517178 101 ntBASIC-0.81□□□□□ -2.54
NCK1P16333 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 SNORD27-201ENST00000363981 72 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 RNU6-239P-201ENST00000390990 99 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 RNU6-588P-201ENST00000410281 105 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 RNU6-175P-201ENST00000516896 107 ntBASIC-0.82□□□□□ -2.54
NCK1P16333 RNU4-32P-201ENST00000363404 141 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 MIR539-201ENST00000365690 78 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 MIR34C-201ENST00000384831 77 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 MIR516A2-201ENST00000384888 90 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 MIR516A1-201ENST00000385033 90 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 SNX3P1X-201ENST00000414887 175 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 AC007012.1-201ENST00000567192 175 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 MIR4432-201ENST00000581823 84 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 MIR4436A-201ENST00000585278 85 ntBASIC-0.83□□□□□ -2.54
NCK1P16333 MIR20A-201ENST00000362279 71 ntBASIC-0.84□□□□□ -2.54
NCK1P16333 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms