Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR7-2-201ENST00000384970 110 ntBASIC1.31□□□□□ -2.2
COL6A2P12110 MIR519A1-201ENST00000385257 85 ntBASIC1.31□□□□□ -2.2
COL6A2P12110 MIR100-201ENST00000385259 80 ntBASIC1.31□□□□□ -2.2
COL6A2P12110 AP003327.1-201ENST00000529684 127 ntBASIC1.31□□□□□ -2.2
COL6A2P12110 MIR101-2-201ENST00000362195 79 ntBASIC1.3□□□□□ -2.2
COL6A2P12110 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
COL6A2P12110 FABP5P4-201ENST00000437203 171 ntBASIC1.3□□□□□ -2.2
COL6A2P12110 RNU7-102P-201ENST00000458948 62 ntBASIC1.3□□□□□ -2.2
COL6A2P12110 RNU6-1110P-201ENST00000516462 101 ntBASIC1.3□□□□□ -2.2
COL6A2P12110 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
COL6A2P12110 AC025521.1-201ENST00000621624 286 ntBASIC1.3□□□□□ -2.2
COL6A2P12110 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
COL6A2P12110 MIR635-201ENST00000384830 98 ntBASIC1.29□□□□□ -2.2
COL6A2P12110 MIR1302-4-201ENST00000408701 150 ntBASIC1.29□□□□□ -2.2
COL6A2P12110 U7.7-201ENST00000459276 60 ntBASIC1.29□□□□□ -2.2
COL6A2P12110 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.29□□□□□ -2.2
COL6A2P12110 AL136317.1-201ENST00000612653 226 ntBASIC1.29□□□□□ -2.2
COL6A2P12110 SNORD36A-201ENST00000362874 73 ntBASIC1.28□□□□□ -2.2
COL6A2P12110 SNORA7.1-201ENST00000363750 139 ntBASIC1.28□□□□□ -2.2
COL6A2P12110 Y_RNA.191-201ENST00000363972 113 ntBASIC1.28□□□□□ -2.2
COL6A2P12110 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
COL6A2P12110 RNU1-119P-201ENST00000391122 165 ntBASIC1.28□□□□□ -2.2
COL6A2P12110 RNU6-1254P-201ENST00000391266 104 ntBASIC1.28□□□□□ -2.2
COL6A2P12110 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
COL6A2P12110 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
COL6A2P12110 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.21
COL6A2P12110 RNU6-42P-201ENST00000384165 107 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 SNORD116-22-201ENST00000384430 92 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 Y_RNA.536-201ENST00000384621 113 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 MIR516A2-201ENST00000384888 90 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 MIR516A1-201ENST00000385033 90 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 SNORD63B-201ENST00000411005 70 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 Y_RNA.697-201ENST00000516776 113 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 RNU6-448P-201ENST00000517052 107 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 MIR4452-201ENST00000583004 71 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 RMST_2.1-201ENST00000617263 136 ntBASIC1.27□□□□□ -2.21
COL6A2P12110 SNORD73B-201ENST00000364394 72 ntBASIC1.26□□□□□ -2.21
COL6A2P12110 Y_RNA.540-201ENST00000384638 111 ntBASIC1.26□□□□□ -2.21
COL6A2P12110 RNU7-106P-201ENST00000459514 67 ntBASIC1.26□□□□□ -2.21
COL6A2P12110 TRAJ51-201ENST00000504127 63 ntBASIC1.26□□□□□ -2.21
COL6A2P12110 AC008608.1-201ENST00000603910 127 ntBASIC1.26□□□□□ -2.21
COL6A2P12110 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
COL6A2P12110 Y_RNA.17-201ENST00000362433 111 ntBASIC1.25□□□□□ -2.21
COL6A2P12110 MIR520F-201ENST00000384824 87 ntBASIC1.25□□□□□ -2.21
COL6A2P12110 AC092628.1-201ENST00000436250 252 ntBASIC1.25□□□□□ -2.21
COL6A2P12110 Y_RNA.648-201ENST00000459455 110 ntBASIC1.25□□□□□ -2.21
COL6A2P12110 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
COL6A2P12110 RNU6-1134P-201ENST00000365156 101 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 RNU6-291P-201ENST00000384720 107 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 MIR450A2-201ENST00000385022 100 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 RNU6-243P-201ENST00000391140 107 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 SNORA40.6-201ENST00000391153 128 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 AL161932.1-201ENST00000437408 146 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 RNA5SP220-201ENST00000516298 104 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 RNA5SP102-201ENST00000516865 106 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 AC138907.6-201ENST00000568401 126 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 AC138869.1-201ENST00000568623 124 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 AL078603.1-201ENST00000603824 313 ntBASIC1.24□□□□□ -2.21
COL6A2P12110 SNORD114-24-201ENST00000365029 72 ntBASIC1.23□□□□□ -2.21
COL6A2P12110 RNU6-675P-201ENST00000384236 104 ntBASIC1.23□□□□□ -2.21
COL6A2P12110 RNU6-820P-201ENST00000384273 107 ntBASIC1.23□□□□□ -2.21
COL6A2P12110 RNU6-535P-201ENST00000384722 107 ntBASIC1.23□□□□□ -2.21
COL6A2P12110 SNORD124-201ENST00000459577 104 ntBASIC1.23□□□□□ -2.21
COL6A2P12110 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
COL6A2P12110 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
COL6A2P12110 MIR6734-201ENST00000621166 68 ntBASIC1.23□□□□□ -2.21
COL6A2P12110 RNU6-1260P-201ENST00000362944 107 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 SNORD105-201ENST00000386910 85 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 SNORD89-201ENST00000390981 114 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 Y_RNA.593-201ENST00000410292 98 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 Y_RNA.620-201ENST00000411009 88 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 RNA5SP480-201ENST00000516840 109 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 RNU6-762P-201ENST00000517107 102 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 MIR4668-201ENST00000582284 70 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
COL6A2P12110 RNU6-219P-201ENST00000364728 107 ntBASIC1.21□□□□□ -2.22
COL6A2P12110 MIR942-201ENST00000401111 86 ntBASIC1.21□□□□□ -2.22
COL6A2P12110 Y_RNA.609-201ENST00000410669 89 ntBASIC1.21□□□□□ -2.22
COL6A2P12110 SNORA72.7-201ENST00000516349 94 ntBASIC1.21□□□□□ -2.22
COL6A2P12110 AC025627.3-201ENST00000582078 182 ntBASIC1.21□□□□□ -2.22
COL6A2P12110 Y_RNA.174-201ENST00000363781 105 ntBASIC1.2□□□□□ -2.22
COL6A2P12110 MIR520H-201ENST00000385126 88 ntBASIC1.2□□□□□ -2.22
COL6A2P12110 AC097635.1-201ENST00000450678 155 ntBASIC1.2□□□□□ -2.22
COL6A2P12110 RNU7-195P-201ENST00000458793 62 ntBASIC1.2□□□□□ -2.22
COL6A2P12110 Y_RNA.809-201ENST00000516058 95 ntBASIC1.2□□□□□ -2.22
COL6A2P12110 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.2□□□□□ -2.22
COL6A2P12110 uc_338.16-201ENST00000621804 95 ntBASIC1.2□□□□□ -2.22
COL6A2P12110 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL6A2P12110 SNORD114-22-201ENST00000365423 72 ntBASIC1.19□□□□□ -2.22
COL6A2P12110 RNU6-519P-201ENST00000410590 108 ntBASIC1.19□□□□□ -2.22
COL6A2P12110 RNU6-402P-201ENST00000410678 103 ntBASIC1.19□□□□□ -2.22
COL6A2P12110 AC244505.6-201ENST00000452829 130 ntBASIC1.19□□□□□ -2.22
COL6A2P12110 SNORD4B-201ENST00000459083 72 ntBASIC1.19□□□□□ -2.22
COL6A2P12110 RNU6-633P-201ENST00000362612 103 ntBASIC1.18□□□□□ -2.22
COL6A2P12110 RNA5SP245-201ENST00000364239 121 ntBASIC1.18□□□□□ -2.22
COL6A2P12110 RNU6-497P-201ENST00000365316 104 ntBASIC1.18□□□□□ -2.22
COL6A2P12110 RNY1P4-201ENST00000384595 115 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms