Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RNU6-480P-201ENST00000384332 107 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 RNA5SP292-201ENST00000390974 118 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 MIR889-201ENST00000401280 79 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 AC093729.1-201ENST00000513074 128 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 MIR2115-201ENST00000516657 100 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 MIR4712-201ENST00000583750 82 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 AL357312.1-201ENST00000603879 298 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
SNHG28P0DPA3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SNHG28P0DPA3 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 SNORD38.2-201ENST00000384470 69 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 MIR519C-201ENST00000385053 87 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 SNORA75.2-201ENST00000391138 150 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 SNORA75.3-201ENST00000391231 150 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 SNORD83.1-201ENST00000411362 77 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 AL606490.4-201ENST00000423117 127 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 AL450471.1-201ENST00000447509 127 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 SNORA25.13-201ENST00000516395 103 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 AL512310.8-201ENST00000550183 120 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 MIR8066-201ENST00000617280 78 ntBASIC1.19□□□□□ -2.22
SNHG28P0DPA3 MIR377-201ENST00000362145 69 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 RNU6-369P-201ENST00000362515 102 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 RNU4-32P-201ENST00000363404 141 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 SNORD114-27-201ENST00000363766 70 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 RNU6-24P-201ENST00000384440 107 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 RNU6-519P-201ENST00000410590 108 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 TRAJ51-201ENST00000504127 63 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 AC036111.3-201ENST00000526389 112 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 AC013244.2-201ENST00000603396 103 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 Y_RNA.788-201ENST00000622394 112 ntBASIC1.18□□□□□ -2.22
SNHG28P0DPA3 RNU6-1229P-201ENST00000364295 107 ntBASIC1.17□□□□□ -2.22
SNHG28P0DPA3 RNU6-571P-201ENST00000384128 107 ntBASIC1.17□□□□□ -2.22
SNHG28P0DPA3 MIR1287-201ENST00000408492 90 ntBASIC1.17□□□□□ -2.22
SNHG28P0DPA3 snoU13.9-201ENST00000458927 103 ntBASIC1.17□□□□□ -2.22
SNHG28P0DPA3 Y_RNA.648-201ENST00000459455 110 ntBASIC1.17□□□□□ -2.22
SNHG28P0DPA3 AC079140.2-201ENST00000506193 142 ntBASIC1.17□□□□□ -2.22
SNHG28P0DPA3 MIR4422-201ENST00000581938 83 ntBASIC1.17□□□□□ -2.22
SNHG28P0DPA3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SNHG28P0DPA3 MIR26B-201ENST00000362251 77 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 RNU6-624P-201ENST00000363411 107 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 RNU6-957P-201ENST00000363652 99 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 SNORD114-22-201ENST00000365423 72 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 MT-TF-201ENST00000387314 71 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SNHG28P0DPA3 SNORD93-201ENST00000408813 74 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 RNU7-185P-201ENST00000459215 60 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 RNU11-2P-201ENST00000516898 142 ntBASIC1.16□□□□□ -2.22
SNHG28P0DPA3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SNHG28P0DPA3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SNHG28P0DPA3 MIR373-201ENST00000362273 69 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 RNU6-403P-201ENST00000363163 104 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 RNA5SP245-201ENST00000364239 121 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 SNORD100-201ENST00000408573 76 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 SNORD63B-201ENST00000411005 70 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 RNU6-65P-201ENST00000516332 98 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 AC023934.1-201ENST00000574529 2389 ntBASIC1.15□□□□□ -2.23
SNHG28P0DPA3 MIRLET7F1-201ENST00000362202 87 ntBASIC1.14□□□□□ -2.23
SNHG28P0DPA3 Y_RNA.283-201ENST00000364798 112 ntBASIC1.14□□□□□ -2.23
SNHG28P0DPA3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SNHG28P0DPA3 SNORA72.6-201ENST00000384520 129 ntBASIC1.14□□□□□ -2.23
SNHG28P0DPA3 Y_RNA.532-201ENST00000384590 113 ntBASIC1.14□□□□□ -2.23
SNHG28P0DPA3 RNU7-195P-201ENST00000458793 62 ntBASIC1.14□□□□□ -2.23
SNHG28P0DPA3 MIR3937-201ENST00000580135 106 ntBASIC1.14□□□□□ -2.23
SNHG28P0DPA3 RNU6-776P-201ENST00000364403 104 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 RNU6-1022P-201ENST00000365049 104 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 MIR18B-201ENST00000454574 71 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 SNORA31.2-201ENST00000516019 134 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 SNORA18.5-201ENST00000516616 101 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.13□□□□□ -2.23
SNHG28P0DPA3 AC023827.1-201ENST00000569247 97 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 MIR3064-201ENST00000581130 66 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.13□□□□□ -2.23
SNHG28P0DPA3 MIR6082-201ENST00000613604 109 ntBASIC1.13□□□□□ -2.23
SNHG28P0DPA3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 RNU1-78P-201ENST00000391248 165 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 MIR1236-201ENST00000408340 102 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 RNU6-523P-201ENST00000516304 54 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 MIR4452-201ENST00000583004 71 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 AC008608.1-201ENST00000603910 127 ntBASIC1.12□□□□□ -2.23
SNHG28P0DPA3 SNORA63.2-201ENST00000362603 126 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 SNORD113.3-201ENST00000364630 78 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 RNU6-934P-201ENST00000365154 107 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 Y_RNA.536-201ENST00000384621 113 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 MIR520H-201ENST00000385126 88 ntBASIC1.11□□□□□ -2.23
SNHG28P0DPA3 AC092628.1-201ENST00000436250 252 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 365.6 ms