Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MIR6086-201ENST00000638065 55 ntBASIC-0.28□□□□□ -2.45
CD74P04233 RNU6-694P-201ENST00000364071 147 ntBASIC-0.29□□□□□ -2.46
CD74P04233 RNU4-84P-201ENST00000364200 139 ntBASIC-0.29□□□□□ -2.46
CD74P04233 MIR34C-201ENST00000384831 77 ntBASIC-0.29□□□□□ -2.46
CD74P04233 MIR1265-201ENST00000408444 86 ntBASIC-0.29□□□□□ -2.46
CD74P04233 SNORD4A-201ENST00000459174 72 ntBASIC-0.29□□□□□ -2.46
CD74P04233 MIR4503-201ENST00000582187 83 ntBASIC-0.29□□□□□ -2.46
CD74P04233 MIR4473-201ENST00000583731 91 ntBASIC-0.29□□□□□ -2.46
CD74P04233 AP001180.6-201ENST00000584918 159 ntBASIC-0.29□□□□□ -2.46
CD74P04233 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.29□□□□□ -2.46
CD74P04233 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.3□□□□□ -2.46
CD74P04233 RNA5SP98-201ENST00000363158 137 ntBASIC-0.3□□□□□ -2.46
CD74P04233 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.3□□□□□ -2.46
CD74P04233 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.3□□□□□ -2.46
CD74P04233 SNORA25.13-201ENST00000516395 103 ntBASIC-0.3□□□□□ -2.46
CD74P04233 RNU6-850P-201ENST00000516934 103 ntBASIC-0.3□□□□□ -2.46
CD74P04233 SNORA18.1-201ENST00000363418 128 ntBASIC-0.31□□□□□ -2.46
CD74P04233 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.31□□□□□ -2.46
CD74P04233 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.31□□□□□ -2.46
CD74P04233 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.31□□□□□ -2.46
CD74P04233 RNU6-571P-201ENST00000384128 107 ntBASIC-0.31□□□□□ -2.46
CD74P04233 RNU6-196P-201ENST00000384315 107 ntBASIC-0.31□□□□□ -2.46
CD74P04233 MIR516A2-201ENST00000384888 90 ntBASIC-0.31□□□□□ -2.46
CD74P04233 MIR516A1-201ENST00000385033 90 ntBASIC-0.31□□□□□ -2.46
CD74P04233 MIR519A1-201ENST00000385257 85 ntBASIC-0.31□□□□□ -2.46
CD74P04233 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.31□□□□□ -2.46
CD74P04233 RNU7-74P-201ENST00000459104 62 ntBASIC-0.31□□□□□ -2.46
CD74P04233 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.31□□□□□ -2.46
CD74P04233 RNU6-320P-201ENST00000516511 106 ntBASIC-0.31□□□□□ -2.46
CD74P04233 RNU7-121P-201ENST00000516604 62 ntBASIC-0.31□□□□□ -2.46
CD74P04233 CR383656.4-201ENST00000546909 122 ntBASIC-0.31□□□□□ -2.46
CD74P04233 MTND5P40-201ENST00000559945 246 ntBASIC-0.31□□□□□ -2.46
CD74P04233 MIR4493-201ENST00000584016 73 ntBASIC-0.31□□□□□ -2.46
CD74P04233 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.31□□□□□ -2.46
CD74P04233 AC021753.1-201ENST00000635724 168 ntBASIC-0.31□□□□□ -2.46
CD74P04233 MIR655-201ENST00000362159 97 ntBASIC-0.32□□□□□ -2.46
CD74P04233 SNORD114-28-201ENST00000363610 72 ntBASIC-0.32□□□□□ -2.46
CD74P04233 RNU1-141P-201ENST00000364623 158 ntBASIC-0.32□□□□□ -2.46
CD74P04233 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.32□□□□□ -2.46
CD74P04233 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.32□□□□□ -2.46
CD74P04233 RNU6-46P-201ENST00000383860 107 ntBASIC-0.32□□□□□ -2.46
CD74P04233 RNA5SP25-201ENST00000410815 110 ntBASIC-0.32□□□□□ -2.46
CD74P04233 MTND3P2-201ENST00000438452 342 ntBASIC-0.32□□□□□ -2.46
CD74P04233 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.32□□□□□ -2.46
CD74P04233 RNU6-521P-201ENST00000516663 105 ntBASIC-0.32□□□□□ -2.46
CD74P04233 AP002392.1-201ENST00000537692 208 ntBASIC-0.32□□□□□ -2.46
CD74P04233 AC072026.1-201ENST00000605023 201 ntBASIC-0.32□□□□□ -2.46
CD74P04233 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.32□□□□□ -2.46
CD74P04233 AC141273.2-201ENST00000618989 130 ntBASIC-0.32□□□□□ -2.46
CD74P04233 AC087741.2-201ENST00000619415 172 ntBASIC-0.32□□□□□ -2.46
CD74P04233 RNA5SP275-201ENST00000363936 118 ntBASIC-0.33□□□□□ -2.46
CD74P04233 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.33□□□□□ -2.46
CD74P04233 MT-TI-201ENST00000387365 69 ntBASIC-0.33□□□□□ -2.46
CD74P04233 MIR876-201ENST00000401147 81 ntBASIC-0.33□□□□□ -2.46
CD74P04233 RNU6-758P-201ENST00000516292 89 ntBASIC-0.33□□□□□ -2.46
CD74P04233 MIR101-1-201ENST00000362265 75 ntBASIC-0.34□□□□□ -2.46
CD74P04233 RNU4-11P-201ENST00000365287 132 ntBASIC-0.34□□□□□ -2.46
CD74P04233 AC244250.2-201ENST00000418731 148 ntBASIC-0.34□□□□□ -2.46
CD74P04233 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.34□□□□□ -2.46
CD74P04233 RNU6-861P-201ENST00000516745 106 ntBASIC-0.34□□□□□ -2.46
CD74P04233 YWHAEP2-201ENST00000580066 112 ntBASIC-0.34□□□□□ -2.46
CD74P04233 MIR548AG2-201ENST00000581228 64 ntBASIC-0.34□□□□□ -2.46
CD74P04233 MIR6507-201ENST00000613630 70 ntBASIC-0.34□□□□□ -2.46
CD74P04233 RN7SL660P-201ENST00000614852 299 ntBASIC-0.34□□□□□ -2.46
CD74P04233 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.35□□□□□ -2.47
CD74P04233 SNORD114-11-201ENST00000363738 75 ntBASIC-0.35□□□□□ -2.47
CD74P04233 SNORD49B-201ENST00000365172 72 ntBASIC-0.35□□□□□ -2.47
CD74P04233 SNORD14C-201ENST00000365382 88 ntBASIC-0.35□□□□□ -2.47
CD74P04233 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.35□□□□□ -2.47
CD74P04233 SNORD38.2-201ENST00000384470 69 ntBASIC-0.35□□□□□ -2.47
CD74P04233 MIR519E-201ENST00000385075 84 ntBASIC-0.35□□□□□ -2.47
CD74P04233 RNU6-460P-201ENST00000391158 108 ntBASIC-0.35□□□□□ -2.47
CD74P04233 AC096531.1-201ENST00000419107 107 ntBASIC-0.35□□□□□ -2.47
CD74P04233 HAR1A.1-201ENST00000459583 118 ntBASIC-0.35□□□□□ -2.47
CD74P04233 RNU7-188P-201ENST00000517063 64 ntBASIC-0.35□□□□□ -2.47
CD74P04233 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.35□□□□□ -2.47
CD74P04233 MIR3163-201ENST00000581592 73 ntBASIC-0.35□□□□□ -2.47
CD74P04233 MIR148A-201ENST00000362215 68 ntBASIC-0.36□□□□□ -2.47
CD74P04233 U8.6-201ENST00000364939 135 ntBASIC-0.36□□□□□ -2.47
CD74P04233 RNU6-915P-201ENST00000364943 103 ntBASIC-0.36□□□□□ -2.47
CD74P04233 MIR604-201ENST00000384880 94 ntBASIC-0.36□□□□□ -2.47
CD74P04233 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.36□□□□□ -2.47
CD74P04233 SNORA7.5-201ENST00000410672 110 ntBASIC-0.36□□□□□ -2.47
CD74P04233 AL161932.1-201ENST00000437408 146 ntBASIC-0.36□□□□□ -2.47
CD74P04233 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.36□□□□□ -2.47
CD74P04233 IGKV1-22-201ENST00000524313 326 ntBASIC-0.36□□□□□ -2.47
CD74P04233 uc_338.10-201ENST00000621872 182 ntBASIC-0.36□□□□□ -2.47
CD74P04233 MIR1255B1-201ENST00000636325 63 ntBASIC-0.36□□□□□ -2.47
CD74P04233 RNU6-151P-201ENST00000364158 107 ntBASIC-0.37□□□□□ -2.47
CD74P04233 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.37□□□□□ -2.47
CD74P04233 RNA5SP205-201ENST00000364653 136 ntBASIC-0.37□□□□□ -2.47
CD74P04233 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.37□□□□□ -2.47
CD74P04233 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.37□□□□□ -2.47
CD74P04233 MIR617-201ENST00000385030 97 ntBASIC-0.37□□□□□ -2.47
CD74P04233 MIR759-201ENST00000390224 91 ntBASIC-0.37□□□□□ -2.47
CD74P04233 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
CD74P04233 MIR1263-201ENST00000408324 86 ntBASIC-0.37□□□□□ -2.47
CD74P04233 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.37□□□□□ -2.47
CD74P04233 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.37□□□□□ -2.47
CD74P04233 MIR4460-201ENST00000577862 86 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 259.8 ms