Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU7-30P-201ENST00000516835 62 ntBASIC-0.69□□□□□ -2.52
COL1A1P02452 YWHAEP3-201ENST00000582767 121 ntBASIC-0.69□□□□□ -2.52
COL1A1P02452 C8orf59P2-201ENST00000603441 271 ntBASIC-0.69□□□□□ -2.52
COL1A1P02452 AC108081.1-201ENST00000604358 221 ntBASIC-0.69□□□□□ -2.52
COL1A1P02452 AP001362.1-201ENST00000625165 124 ntBASIC-0.69□□□□□ -2.52
COL1A1P02452 RNU6-664P-201ENST00000362381 107 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 RNU6-704P-201ENST00000364162 103 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 MIR203A-201ENST00000384836 110 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
COL1A1P02452 MIR1255B2-201ENST00000408618 67 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 RNU4-14P-201ENST00000410858 122 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 RNU7-2P-201ENST00000516096 62 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 RNU6-720P-201ENST00000516363 108 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 MIR3140-201ENST00000583685 90 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 AC006006.1-201ENST00000603082 144 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 AC025253.1-201ENST00000613623 543 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.7□□□□□ -2.52
COL1A1P02452 U6.96-201ENST00000636425 70 ntBASIC-0.7□□□□□ -2.52
COL1A1P02452 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 RNY1P11-201ENST00000363759 113 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 SNORD27-201ENST00000363981 72 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 SNORD101-201ENST00000384027 73 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 RNU6-890P-201ENST00000384121 107 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 RNY1P6-201ENST00000384193 109 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 MIR451A-201ENST00000385059 72 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 RNA5SP86-201ENST00000390869 98 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 SNORA26.4-201ENST00000391188 123 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 AL606845.1-201ENST00000404881 255 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 MIR548H1-201ENST00000408610 102 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 SNORD75.2-201ENST00000408784 58 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 AC090616.4-201ENST00000448026 115 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 AC107027.2-201ENST00000512197 115 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 FGF7P7-201ENST00000514120 227 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 RNU6-699P-201ENST00000517081 110 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 snoU18.1-201ENST00000629629 71 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 AC073869.6-201ENST00000640656 341 ntBASIC-0.71□□□□□ -2.52
COL1A1P02452 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 RNU4-24P-201ENST00000364565 139 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 SNORA33.1-201ENST00000364957 130 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
COL1A1P02452 RNU6-243P-201ENST00000391140 107 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 RNU6-130P-201ENST00000411112 103 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 FGF7P6-202ENST00000451282 293 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 RNU6-240P-201ENST00000516098 97 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 MIR4770-201ENST00000579149 58 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 AC138207.3-201ENST00000585289 166 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.72□□□□□ -2.52
COL1A1P02452 RNU6-164P-201ENST00000364604 103 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 MT-TI-201ENST00000387365 69 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 RNU7-123P-201ENST00000515911 60 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 RNY4-201ENST00000516507 96 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 AC002553.4-201ENST00000616896 331 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 AL138825.1-201ENST00000618587 192 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 SNORD115-33-201ENST00000363723 82 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 SNORD18.1-201ENST00000363807 70 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 SNORA63.6-201ENST00000364921 119 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 RNU6-690P-201ENST00000365242 106 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 SNORA62.4-201ENST00000365504 151 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 RNU6-80P-201ENST00000384195 107 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 SNORD116-1-201ENST00000384335 95 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 SNORD90-201ENST00000391145 111 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 RNU4-69P-201ENST00000410677 143 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 RNU6-651P-201ENST00000411040 105 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 AC138393.2-201ENST00000414742 246 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 MTND4P17-201ENST00000470444 350 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 U7.5-201ENST00000517224 61 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 CYP3A54P-201ENST00000566950 75 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 MIR4756-201ENST00000577874 78 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 MIR4272-201ENST00000635924 64 ntBASIC-0.73□□□□□ -2.53
COL1A1P02452 RNU6-235P-201ENST00000362644 107 ntBASIC-0.74□□□□□ -2.53
COL1A1P02452 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.74□□□□□ -2.53
COL1A1P02452 SNORD115-19-201ENST00000363098 82 ntBASIC-0.74□□□□□ -2.53
COL1A1P02452 SNORD115-18-201ENST00000363293 82 ntBASIC-0.74□□□□□ -2.53
COL1A1P02452 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms