Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
TSPAN1O60635 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.16□□□□□ -2.38
TSPAN1O60635 MIR548D2-201ENST00000384955 97 ntBASIC0.15□□□□□ -2.39
TSPAN1O60635 MIR760-201ENST00000390220 80 ntBASIC0.15□□□□□ -2.39
TSPAN1O60635 RNU6-257P-201ENST00000410238 98 ntBASIC0.15□□□□□ -2.39
TSPAN1O60635 RNU7-106P-201ENST00000459514 67 ntBASIC0.15□□□□□ -2.39
TSPAN1O60635 RNU6-850P-201ENST00000516934 103 ntBASIC0.15□□□□□ -2.39
TSPAN1O60635 MIR2909-201ENST00000617113 69 ntBASIC0.15□□□□□ -2.39
TSPAN1O60635 AC067863.3-201ENST00000624172 122 ntBASIC0.15□□□□□ -2.39
TSPAN1O60635 RNU6-170P-201ENST00000362832 104 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 Y_RNA.344-201ENST00000365381 112 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 Y_RNA.506-201ENST00000384494 102 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 AC097635.1-201ENST00000450678 155 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 RNU6-1212P-201ENST00000517023 104 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 AC025166.1-201ENST00000612411 163 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 MIR499B-201ENST00000636498 73 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
TSPAN1O60635 SNORA9.1-201ENST00000362412 131 ntBASIC0.13□□□□□ -2.39
TSPAN1O60635 SNORD58C-201ENST00000365223 64 ntBASIC0.13□□□□□ -2.39
TSPAN1O60635 Y_RNA.568-201ENST00000384742 113 ntBASIC0.13□□□□□ -2.39
TSPAN1O60635 Y_RNA.630-201ENST00000411370 108 ntBASIC0.13□□□□□ -2.39
TSPAN1O60635 Y_RNA.809-201ENST00000516058 95 ntBASIC0.13□□□□□ -2.39
TSPAN1O60635 AL162376.1-201ENST00000624117 175 ntBASIC0.13□□□□□ -2.39
TSPAN1O60635 RNA5SP457-201ENST00000363657 124 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 Y_RNA.343-201ENST00000365354 112 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 SNORA40-201ENST00000388090 126 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 RNU6-269P-201ENST00000391077 97 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 RNU6-1211P-201ENST00000459179 105 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 MTND5P40-201ENST00000559945 246 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 SNORA70.25-201ENST00000612741 95 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 AL109933.3-201ENST00000619095 188 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 AL512310.12-203ENST00000640543 90 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 MTND5P18-201ENST00000445624 1801 ntBASIC0.12□□□□□ -2.39
TSPAN1O60635 SNORA2A-201ENST00000383885 135 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 RNU6-571P-201ENST00000384128 107 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 RNU6-524P-201ENST00000384270 107 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 Y_RNA.525-201ENST00000384570 113 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 MIR516A2-201ENST00000384888 90 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 MIR516A1-201ENST00000385033 90 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 RNU6-127P-201ENST00000390897 107 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 AL353813.1-201ENST00000440700 253 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.11□□□□□ -2.39
TSPAN1O60635 RPL39P34-201ENST00000477141 156 ntBASIC0.11□□□□□ -2.39
TSPAN1O60635 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.11□□□□□ -2.39
TSPAN1O60635 Y_RNA.247-201ENST00000364500 92 ntBASIC0.1□□□□□ -2.39
TSPAN1O60635 MIR643-201ENST00000385267 97 ntBASIC0.1□□□□□ -2.39
TSPAN1O60635 RNU6-907P-201ENST00000390924 102 ntBASIC0.1□□□□□ -2.39
TSPAN1O60635 SNORD41.1-201ENST00000391000 69 ntBASIC0.1□□□□□ -2.39
TSPAN1O60635 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
TSPAN1O60635 Y_RNA.35-201ENST00000362601 101 ntBASIC0.09□□□□□ -2.4
TSPAN1O60635 RNU6-363P-201ENST00000362895 105 ntBASIC0.09□□□□□ -2.4
TSPAN1O60635 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
TSPAN1O60635 RNA5SP128-201ENST00000365305 116 ntBASIC0.09□□□□□ -2.4
TSPAN1O60635 Y_RNA.342-201ENST00000365352 113 ntBASIC0.09□□□□□ -2.4
TSPAN1O60635 RNU7-107P-201ENST00000459121 61 ntBASIC0.09□□□□□ -2.4
TSPAN1O60635 RNU6-971P-201ENST00000516920 106 ntBASIC0.09□□□□□ -2.4
TSPAN1O60635 RNU6-1006P-201ENST00000516998 103 ntBASIC0.09□□□□□ -2.4
TSPAN1O60635 RNU6-1260P-201ENST00000362944 107 ntBASIC0.08□□□□□ -2.4
TSPAN1O60635 MIR519A1-201ENST00000385257 85 ntBASIC0.08□□□□□ -2.4
TSPAN1O60635 SPINT5P-201ENST00000448174 155 ntBASIC0.08□□□□□ -2.4
TSPAN1O60635 RNU6-772P-201ENST00000516042 105 ntBASIC0.08□□□□□ -2.4
TSPAN1O60635 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
TSPAN1O60635 Y_RNA.155-201ENST00000363632 101 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 RNY4P6-201ENST00000363667 96 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 Y_RNA.323-201ENST00000365157 109 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 RNU6-209P-201ENST00000384118 107 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 SNORD38.2-201ENST00000384470 69 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 RNU6-848P-201ENST00000515948 107 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 RNU6-617P-201ENST00000516147 107 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 RNU6-473P-201ENST00000516164 107 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 RNU6-1049P-201ENST00000516414 107 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 MIR3920-201ENST00000581751 86 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 MIR3668-201ENST00000582138 75 ntBASIC0.07□□□□□ -2.4
TSPAN1O60635 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
TSPAN1O60635 RNU6-1313P-201ENST00000362622 102 ntBASIC0.06□□□□□ -2.4
TSPAN1O60635 Y_RNA.362-201ENST00000365518 110 ntBASIC0.06□□□□□ -2.4
TSPAN1O60635 RNY1P5-201ENST00000383890 115 ntBASIC0.06□□□□□ -2.4
TSPAN1O60635 RNU6-409P-201ENST00000384114 104 ntBASIC0.06□□□□□ -2.4
TSPAN1O60635 RNU6-816P-201ENST00000390914 107 ntBASIC0.06□□□□□ -2.4
TSPAN1O60635 RNU6-1268P-201ENST00000391214 107 ntBASIC0.06□□□□□ -2.4
TSPAN1O60635 RNU6-1239P-201ENST00000391310 107 ntBASIC0.06□□□□□ -2.4
TSPAN1O60635 RNU6-1265P-201ENST00000516342 103 ntBASIC0.06□□□□□ -2.4
TSPAN1O60635 Y_RNA.586-201ENST00000391146 98 ntBASIC0.05□□□□□ -2.4
TSPAN1O60635 RNU7-13P-201ENST00000516413 62 ntBASIC0.05□□□□□ -2.4
TSPAN1O60635 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.05□□□□□ -2.4
TSPAN1O60635 AL157777.2-201ENST00000258070 137 ntBASIC0.04□□□□□ -2.4
TSPAN1O60635 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
TSPAN1O60635 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
TSPAN1O60635 MIR501-201ENST00000390204 84 ntBASIC0.04□□□□□ -2.4
TSPAN1O60635 MIR548I1-201ENST00000408810 149 ntBASIC0.04□□□□□ -2.4
TSPAN1O60635 AL161932.1-201ENST00000437408 146 ntBASIC0.04□□□□□ -2.4
TSPAN1O60635 RNU6-774P-201ENST00000363238 107 ntBASIC0.03□□□□□ -2.4
TSPAN1O60635 Y_RNA.346-201ENST00000365385 112 ntBASIC0.03□□□□□ -2.4
TSPAN1O60635 Y_RNA.507-201ENST00000384500 99 ntBASIC0.03□□□□□ -2.4
TSPAN1O60635 MT-TR-201ENST00000387439 65 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 249.2 ms