Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ACTN4O43707 RNU6-535P-201ENST00000384722 107 ntBASIC2.39□□□□□ -2.03
ACTN4O43707 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.39□□□□□ -2.03
ACTN4O43707 AP000553.5-201ENST00000641933 54 ntBASIC2.39□□□□□ -2.03
ACTN4O43707 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ACTN4O43707 SNORD113.3-201ENST00000364630 78 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 RNU6-382P-201ENST00000365181 106 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 Y_RNA.330-201ENST00000365230 109 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 RNA5SP338-201ENST00000410495 85 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 RNU6-141P-201ENST00000410499 105 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 AC244098.3-201ENST00000424803 96 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 AC069503.3-201ENST00000618674 145 ntBASIC2.38□□□□□ -2.03
ACTN4O43707 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ACTN4O43707 RNA5SP245-201ENST00000364239 121 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 RNA5SP160-201ENST00000364866 120 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 RNU4-53P-201ENST00000410828 140 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 RNU6-717P-201ENST00000459076 104 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 RNU6-287P-201ENST00000516230 98 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 AL645939.4-201ENST00000604495 135 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
ACTN4O43707 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ACTN4O43707 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ACTN4O43707 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
ACTN4O43707 AC110620.1-201ENST00000416042 228 ntBASIC2.36□□□□□ -2.03
ACTN4O43707 AC019176.1-201ENST00000518519 225 ntBASIC2.36□□□□□ -2.03
ACTN4O43707 AL078603.1-201ENST00000603824 313 ntBASIC2.36□□□□□ -2.03
ACTN4O43707 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ACTN4O43707 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ACTN4O43707 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.35□□□□□ -2.03
ACTN4O43707 AL691482.2-201ENST00000457453 84 ntBASIC2.35□□□□□ -2.03
ACTN4O43707 MIR4713-201ENST00000582691 75 ntBASIC2.35□□□□□ -2.03
ACTN4O43707 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.35□□□□□ -2.03
ACTN4O43707 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.34□□□□□ -2.03
ACTN4O43707 Y_RNA.258-201ENST00000364613 105 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 RNU6-364P-201ENST00000384387 107 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 SNORA40.6-201ENST00000391153 128 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 HMGN2P38-201ENST00000423806 265 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 AC008608.1-201ENST00000603910 127 ntBASIC2.34□□□□□ -2.03
ACTN4O43707 SNORD115-44-201ENST00000365391 82 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 RNU6-614P-201ENST00000384369 107 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 MIR633-201ENST00000384821 98 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 snoU13.9-201ENST00000458927 103 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 AC079140.2-201ENST00000506193 142 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 AC036111.3-201ENST00000526389 112 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 U6.59-201ENST00000615686 107 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 AL109933.3-201ENST00000619095 188 ntBASIC2.33□□□□□ -2.04
ACTN4O43707 RNU6-669P-201ENST00000365575 107 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 RNU4-52P-201ENST00000384209 138 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 RNU6-1065P-201ENST00000384513 106 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 AC008413.1-201ENST00000511864 177 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 MIR4287-201ENST00000579398 78 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 MIR3945-201ENST00000581853 98 ntBASIC2.32□□□□□ -2.04
ACTN4O43707 SNORD1A-201ENST00000364968 72 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 RPS26P5-201ENST00000418544 335 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 AC244505.6-201ENST00000452829 130 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 MIR3937-201ENST00000580135 106 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 MIR4676-201ENST00000583078 72 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 AC104984.5-201ENST00000586878 94 ntBASIC2.31□□□□□ -2.04
ACTN4O43707 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.31□□□□□ -2.04
ACTN4O43707 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ACTN4O43707 RNU6-1187P-201ENST00000364771 110 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU1-41P-201ENST00000516161 162 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU6-982P-201ENST00000516216 102 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU1-48P-201ENST00000516400 162 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU1-40P-201ENST00000516816 164 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 RNU1-97P-201ENST00000516872 164 ntBASIC2.3□□□□□ -2.04
ACTN4O43707 MIR302D-201ENST00000362275 68 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 SNORD33-201ENST00000362761 85 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 MIR938-201ENST00000401216 83 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 RNU7-13P-201ENST00000516413 62 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 RNU6-165P-201ENST00000517170 99 ntBASIC2.29□□□□□ -2.04
ACTN4O43707 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 SNORA70B-201ENST00000384210 135 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 SNORD111-201ENST00000408139 94 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 AC079150.2-201ENST00000443733 78 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 MTND4LP1-201ENST00000446263 157 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 RNU7-40P-201ENST00000516397 64 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 AC027335.2-201ENST00000624030 375 ntBASIC2.28□□□□□ -2.04
ACTN4O43707 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACTN4O43707 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ACTN4O43707 RNU6-668P-201ENST00000364180 107 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 SNORD75.2-201ENST00000408784 58 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 AL356320.1-201ENST00000429616 163 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 MIR4448-201ENST00000584360 86 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 AC103810.8-201ENST00000607347 118 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 MIR6873-201ENST00000622788 63 ntBASIC2.27□□□□□ -2.05
ACTN4O43707 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACTN4O43707 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
ACTN4O43707 RNU7-102P-201ENST00000458948 62 ntBASIC2.26□□□□□ -2.05
ACTN4O43707 Y_RNA.783-201ENST00000613546 102 ntBASIC2.26□□□□□ -2.05
ACTN4O43707 AC106800.4-201ENST00000614905 153 ntBASIC2.26□□□□□ -2.05
ACTN4O43707 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ACTN4O43707 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ACTN4O43707 SNORA75.2-201ENST00000391138 150 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 SNORA75.3-201ENST00000391231 150 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 SNORA3.2-201ENST00000408221 125 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms