Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-90P-201ENST00000606352 106 ntBASIC1.02□□□□□ -2.25
FOXN3O00409 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
FOXN3O00409 Y_RNA.93-201ENST00000363066 109 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 Y_RNA.342-201ENST00000365352 113 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 RNU6-42P-201ENST00000384165 107 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 RNU6-364P-201ENST00000384387 107 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 SNORD38.2-201ENST00000384470 69 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 Y_RNA.567-201ENST00000384736 106 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 MIR520E-201ENST00000384867 87 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 SNORD105-201ENST00000386910 85 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 AC103810.7-201ENST00000607821 91 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 U7.3-201ENST00000616123 62 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 MALAT1.1-201ENST00000618249 95 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 MIR6734-201ENST00000621166 68 ntBASIC1.01□□□□□ -2.25
FOXN3O00409 Y_RNA.290-201ENST00000364879 114 ntBASIC1□□□□□ -2.25
FOXN3O00409 Y_RNA.466-201ENST00000384294 113 ntBASIC1□□□□□ -2.25
FOXN3O00409 RNU7-102P-201ENST00000458948 62 ntBASIC1□□□□□ -2.25
FOXN3O00409 RNA5SP220-201ENST00000516298 104 ntBASIC1□□□□□ -2.25
FOXN3O00409 MIR4804-201ENST00000581683 73 ntBASIC1□□□□□ -2.25
FOXN3O00409 MIR6082-201ENST00000613604 109 ntBASIC1□□□□□ -2.25
FOXN3O00409 MIR8066-201ENST00000617280 78 ntBASIC1□□□□□ -2.25
FOXN3O00409 MIR6767-201ENST00000637302 66 ntBASIC1□□□□□ -2.25
FOXN3O00409 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
FOXN3O00409 RNU4-58P-201ENST00000363192 141 ntBASIC0.99□□□□□ -2.25
FOXN3O00409 MIR938-201ENST00000401216 83 ntBASIC0.99□□□□□ -2.25
FOXN3O00409 RPS29P1-201ENST00000465274 159 ntBASIC0.99□□□□□ -2.25
FOXN3O00409 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.99□□□□□ -2.25
FOXN3O00409 RNU6-1194P-201ENST00000516208 104 ntBASIC0.99□□□□□ -2.25
FOXN3O00409 RNU6-850P-201ENST00000516934 103 ntBASIC0.99□□□□□ -2.25
FOXN3O00409 AC011195.1-201ENST00000578177 177 ntBASIC0.99□□□□□ -2.25
FOXN3O00409 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
FOXN3O00409 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.99□□□□□ -2.25
FOXN3O00409 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
FOXN3O00409 HSBP1P2-201ENST00000299671 229 ntBASIC0.98□□□□□ -2.25
FOXN3O00409 RNU6-1255P-201ENST00000363434 112 ntBASIC0.98□□□□□ -2.25
FOXN3O00409 RNU6-1244P-201ENST00000363614 108 ntBASIC0.98□□□□□ -2.25
FOXN3O00409 MIR181B2-201ENST00000385004 89 ntBASIC0.98□□□□□ -2.25
FOXN3O00409 SNRPGP12-201ENST00000449481 213 ntBASIC0.98□□□□□ -2.25
FOXN3O00409 Y_RNA.697-201ENST00000516776 113 ntBASIC0.98□□□□□ -2.25
FOXN3O00409 MIR101-2-201ENST00000362195 79 ntBASIC0.97□□□□□ -2.25
FOXN3O00409 Y_RNA.42-201ENST00000362660 108 ntBASIC0.97□□□□□ -2.25
FOXN3O00409 Y_RNA.57-201ENST00000362806 113 ntBASIC0.97□□□□□ -2.25
FOXN3O00409 RNU6-813P-201ENST00000384691 107 ntBASIC0.97□□□□□ -2.25
FOXN3O00409 RNU1-119P-201ENST00000391122 165 ntBASIC0.97□□□□□ -2.25
FOXN3O00409 RNU7-56P-201ENST00000458744 62 ntBASIC0.97□□□□□ -2.25
FOXN3O00409 Y_RNA.705-201ENST00000516862 110 ntBASIC0.97□□□□□ -2.25
FOXN3O00409 AC025521.1-201ENST00000621624 286 ntBASIC0.97□□□□□ -2.25
FOXN3O00409 Y_RNA.173-201ENST00000363776 113 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 Y_RNA.190-201ENST00000363964 101 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 MIR608-201ENST00000384820 100 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 SNORD100-201ENST00000408573 76 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 RNU6-887P-201ENST00000410660 100 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 Y_RNA.694-201ENST00000516677 117 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 RNU6-158P-201ENST00000517104 100 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 SNORD92-201ENST00000585078 85 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 AL353765.1-201ENST00000605514 183 ntBASIC0.96□□□□□ -2.26
FOXN3O00409 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
FOXN3O00409 Y_RNA.43-201ENST00000362670 111 ntBASIC0.95□□□□□ -2.26
FOXN3O00409 MIR516A2-201ENST00000384888 90 ntBASIC0.95□□□□□ -2.26
FOXN3O00409 MIR516A1-201ENST00000385033 90 ntBASIC0.95□□□□□ -2.26
FOXN3O00409 PSMC1P5-201ENST00000512850 177 ntBASIC0.95□□□□□ -2.26
FOXN3O00409 MIR2052-201ENST00000636055 55 ntBASIC0.95□□□□□ -2.26
FOXN3O00409 Y_RNA.220-201ENST00000364244 109 ntBASIC0.94□□□□□ -2.26
FOXN3O00409 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
FOXN3O00409 RNA5SP222-201ENST00000411039 105 ntBASIC0.94□□□□□ -2.26
FOXN3O00409 AL513043.2-201ENST00000573941 143 ntBASIC0.94□□□□□ -2.26
FOXN3O00409 AC022709.1-201ENST00000615967 87 ntBASIC0.94□□□□□ -2.26
FOXN3O00409 RNA5SP245-201ENST00000364239 121 ntBASIC0.93□□□□□ -2.26
FOXN3O00409 RNU6-1134P-201ENST00000365156 101 ntBASIC0.93□□□□□ -2.26
FOXN3O00409 RNU6-291P-201ENST00000384720 107 ntBASIC0.93□□□□□ -2.26
FOXN3O00409 RNU6-535P-201ENST00000384722 107 ntBASIC0.93□□□□□ -2.26
FOXN3O00409 RNU7-106P-201ENST00000459514 67 ntBASIC0.93□□□□□ -2.26
FOXN3O00409 TRAJ51-201ENST00000504127 63 ntBASIC0.93□□□□□ -2.26
FOXN3O00409 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
FOXN3O00409 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
FOXN3O00409 RNU6-571P-201ENST00000384128 107 ntBASIC0.92□□□□□ -2.26
FOXN3O00409 Y_RNA.536-201ENST00000384621 113 ntBASIC0.92□□□□□ -2.26
FOXN3O00409 RNU6-972P-201ENST00000391208 107 ntBASIC0.92□□□□□ -2.26
FOXN3O00409 SNORD63B-201ENST00000411005 70 ntBASIC0.92□□□□□ -2.26
FOXN3O00409 RNU7-195P-201ENST00000458793 62 ntBASIC0.92□□□□□ -2.26
FOXN3O00409 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
FOXN3O00409 MIR4439-201ENST00000583746 80 ntBASIC0.92□□□□□ -2.26
FOXN3O00409 MIR4679-1-201ENST00000637619 75 ntBASIC0.92□□□□□ -2.26
FOXN3O00409 RNU6-294P-201ENST00000364999 102 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 SNORD58A-201ENST00000383875 65 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 SNORA36.2-201ENST00000384004 127 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 MIR548J-201ENST00000408833 112 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 RNU6-448P-201ENST00000517052 107 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 RNU6-844P-201ENST00000517175 102 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 MIR151B-201ENST00000584249 96 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 AC006254.2-201ENST00000603259 279 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 MIR6788-201ENST00000618842 66 ntBASIC0.91□□□□□ -2.26
FOXN3O00409 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
FOXN3O00409 Y_RNA.32-201ENST00000362589 110 ntBASIC0.9□□□□□ -2.27
FOXN3O00409 RNU6-1125P-201ENST00000363601 107 ntBASIC0.9□□□□□ -2.27
FOXN3O00409 RNU6-480P-201ENST00000384332 107 ntBASIC0.9□□□□□ -2.27
FOXN3O00409 Y_RNA.540-201ENST00000384638 111 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms