Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 Y_RNA.601-201ENST00000410500 113 ntBASIC0.7□□□□□ -2.3
IGHV4-28A0A0C4DH34 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-766P-201ENST00000362478 107 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-1163P-201ENST00000364516 107 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 SNORD45B-201ENST00000364617 72 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU1-93P-201ENST00000364704 169 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.342-201ENST00000365352 113 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-1113P-201ENST00000384348 107 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 SNORD63B-201ENST00000411005 70 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 AC109327.2-201ENST00000448339 378 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-469P-201ENST00000516253 101 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-795P-201ENST00000516323 103 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNY1P8-201ENST00000383970 114 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 SCARNA23-201ENST00000516060 130 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-109P-201ENST00000516364 107 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-184P-201ENST00000516514 107 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 AC138869.1-201ENST00000568623 124 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR3678-201ENST00000578455 94 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR548Z-201ENST00000584743 97 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-86P-201ENST00000606534 107 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 AC012531.4-201ENST00000616509 177 ntBASIC0.68□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.57-201ENST00000362806 113 ntBASIC0.67□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.95-201ENST00000363079 95 ntBASIC0.67□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR520E-201ENST00000384867 87 ntBASIC0.67□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR516A2-201ENST00000384888 90 ntBASIC0.67□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR532-201ENST00000385025 91 ntBASIC0.67□□□□□ -2.3
IGHV4-28A0A0C4DH34 MIR516A1-201ENST00000385033 90 ntBASIC0.67□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU6-537P-201ENST00000517277 103 ntBASIC0.67□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU4-45P-201ENST00000365469 141 ntBASIC0.66□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.467-201ENST00000384297 102 ntBASIC0.66□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU7-195P-201ENST00000458793 62 ntBASIC0.66□□□□□ -2.3
IGHV4-28A0A0C4DH34 RNU7-106P-201ENST00000459514 67 ntBASIC0.66□□□□□ -2.3
IGHV4-28A0A0C4DH34 RPS29P1-201ENST00000465274 159 ntBASIC0.66□□□□□ -2.3
IGHV4-28A0A0C4DH34 Y_RNA.81-201ENST00000362997 102 ntBASIC0.65□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-1244P-201ENST00000363614 108 ntBASIC0.65□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-147P-201ENST00000383983 107 ntBASIC0.65□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.809-201ENST00000516058 95 ntBASIC0.65□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR4777-201ENST00000583710 86 ntBASIC0.65□□□□□ -2.31
IGHV4-28A0A0C4DH34 AL078603.1-201ENST00000603824 313 ntBASIC0.65□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR6857-201ENST00000613267 93 ntBASIC0.65□□□□□ -2.31
IGHV4-28A0A0C4DH34 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
IGHV4-28A0A0C4DH34 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR181B2-201ENST00000385004 89 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR599-201ENST00000385069 95 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 AC097635.1-201ENST00000450678 155 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 AC244505.6-201ENST00000452829 130 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR4439-201ENST00000583746 80 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.818-201ENST00000618813 71 ntBASIC0.64□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.107-201ENST00000363190 121 ntBASIC0.63□□□□□ -2.31
IGHV4-28A0A0C4DH34 SNORD115-24-201ENST00000363528 82 ntBASIC0.63□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-1125P-201ENST00000363601 107 ntBASIC0.63□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-480P-201ENST00000384332 107 ntBASIC0.63□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR519A1-201ENST00000385257 85 ntBASIC0.63□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-1254P-201ENST00000391266 104 ntBASIC0.63□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-135P-201ENST00000516769 101 ntBASIC0.63□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR373-201ENST00000362273 69 ntBASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.221-201ENST00000364248 96 ntBASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-1229P-201ENST00000364295 107 ntBASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.544-201ENST00000384650 113 ntBASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-813P-201ENST00000384691 107 ntBASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 AC103810.7-201ENST00000607821 91 ntBASIC0.62□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-153P-201ENST00000364422 104 ntBASIC0.61□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-243P-201ENST00000391140 107 ntBASIC0.61□□□□□ -2.31
IGHV4-28A0A0C4DH34 RPL39P28-201ENST00000465655 155 ntBASIC0.61□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR151B-201ENST00000584249 96 ntBASIC0.61□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR4639-201ENST00000584938 69 ntBASIC0.61□□□□□ -2.31
IGHV4-28A0A0C4DH34 AC244669.1-204ENST00000621564 178 ntBASIC0.61□□□□□ -2.31
IGHV4-28A0A0C4DH34 AC025521.1-201ENST00000621624 286 ntBASIC0.61□□□□□ -2.31
IGHV4-28A0A0C4DH34 SNORD36A-201ENST00000362874 73 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-1260P-201ENST00000362944 107 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.93-201ENST00000363066 109 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-1187P-201ENST00000364771 110 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-32P-201ENST00000383948 107 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-13P-201ENST00000384248 107 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-524P-201ENST00000384270 107 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.495-201ENST00000384435 112 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-12P-201ENST00000384604 107 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 SNORD28-201ENST00000384706 75 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-41P-201ENST00000384741 107 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR518E-201ENST00000385252 88 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU6-644P-201ENST00000391155 98 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNU7-61P-201ENST00000515897 61 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 RNA5SP220-201ENST00000516298 104 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR6788-201ENST00000618842 66 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR6734-201ENST00000621166 68 ntBASIC0.6□□□□□ -2.31
IGHV4-28A0A0C4DH34 SNORD114-2-201ENST00000363953 78 ntBASIC0.59□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.466-201ENST00000384294 113 ntBASIC0.59□□□□□ -2.31
IGHV4-28A0A0C4DH34 MIR548J-201ENST00000408833 112 ntBASIC0.59□□□□□ -2.31
IGHV4-28A0A0C4DH34 Y_RNA.705-201ENST00000516862 110 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 267.7 ms