Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
VTI1BQ9UEU0 AC008608.1-201ENST00000603910 127 ntBASIC1.46□□□□□ -2.18
VTI1BQ9UEU0 MIR101-2-201ENST00000362195 79 ntBASIC1.45□□□□□ -2.18
VTI1BQ9UEU0 RNU6-1244P-201ENST00000363614 108 ntBASIC1.45□□□□□ -2.18
VTI1BQ9UEU0 Y_RNA.467-201ENST00000384297 102 ntBASIC1.45□□□□□ -2.18
VTI1BQ9UEU0 RNU6-850P-201ENST00000516934 103 ntBASIC1.45□□□□□ -2.18
VTI1BQ9UEU0 AL359821.1-201ENST00000605519 182 ntBASIC1.45□□□□□ -2.18
VTI1BQ9UEU0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
VTI1BQ9UEU0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.44□□□□□ -2.18
VTI1BQ9UEU0 RNU6-813P-201ENST00000384691 107 ntBASIC1.44□□□□□ -2.18
VTI1BQ9UEU0 SNORD100-201ENST00000408573 76 ntBASIC1.44□□□□□ -2.18
VTI1BQ9UEU0 Y_RNA.697-201ENST00000516776 113 ntBASIC1.44□□□□□ -2.18
VTI1BQ9UEU0 Y_RNA.705-201ENST00000516862 110 ntBASIC1.44□□□□□ -2.18
VTI1BQ9UEU0 RNU6-86P-201ENST00000606534 107 ntBASIC1.44□□□□□ -2.18
VTI1BQ9UEU0 AL157834.3-201ENST00000615543 103 ntBASIC1.44□□□□□ -2.18
VTI1BQ9UEU0 RNA5SP99-201ENST00000364020 114 ntBASIC1.43□□□□□ -2.18
VTI1BQ9UEU0 MIR520H-201ENST00000385126 88 ntBASIC1.43□□□□□ -2.18
VTI1BQ9UEU0 SNORD105-201ENST00000386910 85 ntBASIC1.43□□□□□ -2.18
VTI1BQ9UEU0 RNU7-61P-201ENST00000515897 61 ntBASIC1.43□□□□□ -2.18
VTI1BQ9UEU0 MIR4769-201ENST00000584126 77 ntBASIC1.43□□□□□ -2.18
VTI1BQ9UEU0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.43□□□□□ -2.18
VTI1BQ9UEU0 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
VTI1BQ9UEU0 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
VTI1BQ9UEU0 RNU6-644P-201ENST00000391155 98 ntBASIC1.42□□□□□ -2.18
VTI1BQ9UEU0 SNORA17.3-201ENST00000391159 129 ntBASIC1.42□□□□□ -2.18
VTI1BQ9UEU0 Y_RNA.694-201ENST00000516677 117 ntBASIC1.42□□□□□ -2.18
VTI1BQ9UEU0 MIR548H5-201ENST00000580314 60 ntBASIC1.42□□□□□ -2.18
VTI1BQ9UEU0 RNU7-10P-201ENST00000607194 63 ntBASIC1.42□□□□□ -2.18
VTI1BQ9UEU0 Y_RNA.56-201ENST00000362798 112 ntBASIC1.41□□□□□ -2.18
VTI1BQ9UEU0 RNU6-237P-201ENST00000515985 71 ntBASIC1.41□□□□□ -2.18
VTI1BQ9UEU0 RNA5SP255-201ENST00000516370 107 ntBASIC1.41□□□□□ -2.18
VTI1BQ9UEU0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.41□□□□□ -2.18
VTI1BQ9UEU0 RNU6-1125P-201ENST00000363601 107 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 Y_RNA.342-201ENST00000365352 113 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 RNU6-480P-201ENST00000384332 107 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 Y_RNA.536-201ENST00000384621 113 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 RNU6-972P-201ENST00000391208 107 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 RNU6-887P-201ENST00000410660 100 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 RNU6-448P-201ENST00000517052 107 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 MIR4303-201ENST00000581299 66 ntBASIC1.4□□□□□ -2.19
VTI1BQ9UEU0 Y_RNA.57-201ENST00000362806 113 ntBASIC1.39□□□□□ -2.19
VTI1BQ9UEU0 AC025627.3-201ENST00000582078 182 ntBASIC1.39□□□□□ -2.19
VTI1BQ9UEU0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
VTI1BQ9UEU0 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
VTI1BQ9UEU0 RNU6-291P-201ENST00000384720 107 ntBASIC1.38□□□□□ -2.19
VTI1BQ9UEU0 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
VTI1BQ9UEU0 AC103810.7-201ENST00000607821 91 ntBASIC1.38□□□□□ -2.19
VTI1BQ9UEU0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
VTI1BQ9UEU0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.37□□□□□ -2.19
VTI1BQ9UEU0 RNU6-535P-201ENST00000384722 107 ntBASIC1.37□□□□□ -2.19
VTI1BQ9UEU0 MIR635-201ENST00000384830 98 ntBASIC1.37□□□□□ -2.19
VTI1BQ9UEU0 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
VTI1BQ9UEU0 AC108667.1-201ENST00000428618 249 ntBASIC1.37□□□□□ -2.19
VTI1BQ9UEU0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.37□□□□□ -2.19
VTI1BQ9UEU0 RNU6-1298P-201ENST00000362456 101 ntBASIC1.36□□□□□ -2.19
VTI1BQ9UEU0 MIR181B2-201ENST00000385004 89 ntBASIC1.36□□□□□ -2.19
VTI1BQ9UEU0 RNU4-62P-201ENST00000410125 130 ntBASIC1.36□□□□□ -2.19
VTI1BQ9UEU0 SNORD63B-201ENST00000411005 70 ntBASIC1.36□□□□□ -2.19
VTI1BQ9UEU0 MIR3124-201ENST00000582636 67 ntBASIC1.36□□□□□ -2.19
VTI1BQ9UEU0 U7.3-201ENST00000616123 62 ntBASIC1.36□□□□□ -2.19
VTI1BQ9UEU0 MALAT1.1-201ENST00000618249 95 ntBASIC1.36□□□□□ -2.19
VTI1BQ9UEU0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.35□□□□□ -2.19
VTI1BQ9UEU0 AC092628.1-201ENST00000436250 252 ntBASIC1.35□□□□□ -2.19
VTI1BQ9UEU0 TRAJ51-201ENST00000504127 63 ntBASIC1.35□□□□□ -2.19
VTI1BQ9UEU0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.35□□□□□ -2.19
VTI1BQ9UEU0 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
VTI1BQ9UEU0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
VTI1BQ9UEU0 MIR488-201ENST00000365739 83 ntBASIC1.34□□□□□ -2.19
VTI1BQ9UEU0 MIR519A1-201ENST00000385257 85 ntBASIC1.34□□□□□ -2.19
VTI1BQ9UEU0 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
VTI1BQ9UEU0 RNA5SP170-201ENST00000517150 101 ntBASIC1.34□□□□□ -2.19
VTI1BQ9UEU0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.33□□□□□ -2.2
VTI1BQ9UEU0 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
VTI1BQ9UEU0 RNA5SP432-201ENST00000362480 116 ntBASIC1.33□□□□□ -2.2
VTI1BQ9UEU0 Y_RNA.290-201ENST00000364879 114 ntBASIC1.33□□□□□ -2.2
VTI1BQ9UEU0 AC138907.6-201ENST00000568401 126 ntBASIC1.33□□□□□ -2.2
VTI1BQ9UEU0 AC138869.1-201ENST00000568623 124 ntBASIC1.33□□□□□ -2.2
VTI1BQ9UEU0 AC025521.1-201ENST00000621624 286 ntBASIC1.33□□□□□ -2.2
VTI1BQ9UEU0 Y_RNA.174-201ENST00000363781 105 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 SNORD116-10-201ENST00000363791 102 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 MIR516A2-201ENST00000384888 90 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 MIR573-201ENST00000384964 99 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 MIR516A1-201ENST00000385033 90 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 RNU6-1254P-201ENST00000391266 104 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 RNY4P30-201ENST00000410216 95 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 AC002350.1-201ENST00000490759 375 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 RNU6-162P-201ENST00000516228 103 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 uc_338.16-201ENST00000621804 95 ntBASIC1.32□□□□□ -2.2
VTI1BQ9UEU0 Y_RNA.32-201ENST00000362589 110 ntBASIC1.31□□□□□ -2.2
VTI1BQ9UEU0 Y_RNA.220-201ENST00000364244 109 ntBASIC1.31□□□□□ -2.2
VTI1BQ9UEU0 SNORD58A-201ENST00000383875 65 ntBASIC1.31□□□□□ -2.2
VTI1BQ9UEU0 AP1B1P2-201ENST00000416196 106 ntBASIC1.31□□□□□ -2.2
VTI1BQ9UEU0 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
VTI1BQ9UEU0 RNA5SP458-201ENST00000516188 119 ntBASIC1.31□□□□□ -2.2
VTI1BQ9UEU0 RNU1-92P-201ENST00000517017 135 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms