Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 RNU6-476P-201ENST00000384726 107 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 MIR519A1-201ENST00000385257 85 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 MT-TY-201ENST00000387409 66 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 RNU7-48P-201ENST00000458875 63 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 MIR2113-201ENST00000459007 91 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 MIR1270-201ENST00000459320 83 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 RNA5SP470-201ENST00000516463 106 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 AC093783.1-201ENST00000612976 329 ntBASIC-1.06□□□□□ -2.58
VAPAQ9P0L0 RNU6-502P-201ENST00000362419 108 ntBASIC-1.07□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.07□□□□□ -2.58
VAPAQ9P0L0 RNU6-806P-201ENST00000365147 105 ntBASIC-1.07□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.07□□□□□ -2.58
VAPAQ9P0L0 AL121914.1-201ENST00000450188 156 ntBASIC-1.07□□□□□ -2.58
VAPAQ9P0L0 SNORA13-201ENST00000458790 133 ntBASIC-1.07□□□□□ -2.58
VAPAQ9P0L0 MIR378F-201ENST00000578143 78 ntBASIC-1.07□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.58-201ENST00000362807 102 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 RNY3P1-201ENST00000365085 102 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 AC244090.1-201ENST00000441884 93 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 SCARNA18B-201ENST00000458806 135 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 AC090971.5-201ENST00000621102 293 ntBASIC-1.08□□□□□ -2.58
VAPAQ9P0L0 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 RNU6-973P-201ENST00000364690 107 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 MIR206-201ENST00000384872 86 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 RNU6-651P-201ENST00000411040 105 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 AL161932.1-201ENST00000437408 146 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 FGF7P4-201ENST00000509595 295 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 RNU6-287P-201ENST00000516230 98 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 AC007012.1-201ENST00000567192 175 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 MIR6854-201ENST00000614935 69 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 MIR382-201ENST00000637119 76 ntBASIC-1.09□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 RNU6-170P-201ENST00000362832 104 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 RNU6-690P-201ENST00000365242 106 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 MIR582-201ENST00000365731 98 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 RNU2-35P-201ENST00000516446 142 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 AL365265.1-201ENST00000621045 234 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 AP001362.1-201ENST00000625165 124 ntBASIC-1.1□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.11□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.11□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.11□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.11□□□□□ -2.59
VAPAQ9P0L0 SNORD2.1-201ENST00000458762 69 ntBASIC-1.11□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.12□□□□□ -2.59
VAPAQ9P0L0 RNU4-17P-201ENST00000365598 141 ntBASIC-1.12□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.12□□□□□ -2.59
VAPAQ9P0L0 MIR147A-201ENST00000385079 72 ntBASIC-1.12□□□□□ -2.59
VAPAQ9P0L0 MTND5P22-201ENST00000458380 195 ntBASIC-1.12□□□□□ -2.59
VAPAQ9P0L0 RNU6-762P-201ENST00000517107 102 ntBASIC-1.12□□□□□ -2.59
VAPAQ9P0L0 SNORA40.17-201ENST00000517256 115 ntBASIC-1.12□□□□□ -2.59
VAPAQ9P0L0 AL442663.2-201ENST00000554385 511 ntBASIC-1.12□□□□□ -2.59
VAPAQ9P0L0 RNU6-103P-201ENST00000363686 107 ntBASIC-1.13□□□□□ -2.59
VAPAQ9P0L0 MIR516A2-201ENST00000384888 90 ntBASIC-1.13□□□□□ -2.59
VAPAQ9P0L0 MIR516A1-201ENST00000385033 90 ntBASIC-1.13□□□□□ -2.59
VAPAQ9P0L0 RNA5SP476-201ENST00000516613 103 ntBASIC-1.13□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.14□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.14□□□□□ -2.59
VAPAQ9P0L0 RNU4-69P-201ENST00000410677 143 ntBASIC-1.14□□□□□ -2.59
VAPAQ9P0L0 AC113618.1-201ENST00000416747 285 ntBASIC-1.14□□□□□ -2.59
VAPAQ9P0L0 AL353813.1-201ENST00000440700 253 ntBASIC-1.14□□□□□ -2.59
VAPAQ9P0L0 snoU13.19-201ENST00000459148 104 ntBASIC-1.14□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 RNU6-30P-201ENST00000384561 107 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 SNORD18.2-201ENST00000459604 70 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 MIR4324-201ENST00000584846 72 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 AC009779.6-201ENST00000603972 165 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 U6.100-201ENST00000636230 99 ntBASIC-1.15□□□□□ -2.59
VAPAQ9P0L0 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms