Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-1194P-201ENST00000516208 104 ntBASIC1.88□□□□□ -2.11
TRIM56Q9BRZ2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 Y_RNA.316-201ENST00000365118 111 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-243P-201ENST00000391140 107 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-531P-201ENST00000516694 104 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 MIR6845-201ENST00000613182 61 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-403P-201ENST00000363163 104 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 Y_RNA.588-201ENST00000391254 102 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 MIR1257-201ENST00000408490 117 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 SNORA25.16-201ENST00000516741 121 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 AC019288.1-201ENST00000557918 224 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 RNU1-17P-201ENST00000363022 152 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 RNU4-32P-201ENST00000363404 141 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 RNU7-10P-201ENST00000607194 63 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 AC023934.1-201ENST00000574529 2389 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 SNORD113.3-201ENST00000364630 78 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 MIR583-201ENST00000384846 75 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 RNU7-185P-201ENST00000459215 60 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 AC023790.1-201ENST00000482174 347 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 AC140658.3-201ENST00000567603 271 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 MIR101-2-201ENST00000362195 79 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 SNORD36A-201ENST00000362874 73 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 MIR516A2-201ENST00000384888 90 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 MIR516A1-201ENST00000385033 90 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-466P-201ENST00000391224 103 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 RNU7-85P-201ENST00000458851 63 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-65P-201ENST00000516332 98 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 AC048334.1-201ENST00000477975 159 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 SNORA31.2-201ENST00000516019 134 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 MIR548H5-201ENST00000580314 60 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 MIR4536-1-201ENST00000583537 88 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-1296P-201ENST00000383879 107 ntBASIC1.81□□□□□ -2.12
TRIM56Q9BRZ2 SNORD63B-201ENST00000411005 70 ntBASIC1.81□□□□□ -2.12
TRIM56Q9BRZ2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM56Q9BRZ2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-811P-201ENST00000384069 107 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 SNORA80D-201ENST00000384488 135 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 MIR635-201ENST00000384830 98 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 SNORD100-201ENST00000408573 76 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 AL591704.2-201ENST00000421658 181 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 snoU13.11-201ENST00000459219 104 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-765P-201ENST00000516916 99 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 MIR4712-201ENST00000583750 82 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 MIR6082-201ENST00000613604 109 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 MIR4662A-201ENST00000637499 67 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.283-201ENST00000364798 112 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-934P-201ENST00000365154 107 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 SNORA40.18-201ENST00000391200 128 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 SNORA25.13-201ENST00000516395 103 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 RNU7-153P-201ENST00000516455 62 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 SNORD92-201ENST00000585078 85 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-315P-201ENST00000362666 107 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.221-201ENST00000364248 96 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 MIR548U-201ENST00000390728 81 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 SNORD111-201ENST00000408139 94 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 SNORD83.1-201ENST00000411362 77 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 snoU13.21-201ENST00000459368 105 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 AC036111.3-201ENST00000526389 112 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 MIR4285-201ENST00000581001 85 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.94-201ENST00000363068 106 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.536-201ENST00000384621 113 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 MIR519A1-201ENST00000385257 85 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 SNORD12-201ENST00000391002 90 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 RNU6-129P-201ENST00000391022 107 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 SNORA75.2-201ENST00000391138 150 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 SNORA75.3-201ENST00000391231 150 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 MIR4771-2-201ENST00000577758 74 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 MIR4771-1-201ENST00000582617 74 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 AC013244.2-201ENST00000603396 103 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.13-201ENST00000362403 112 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 MIR125B2-201ENST00000385128 89 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 AC108667.1-201ENST00000428618 249 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 RNU7-106P-201ENST00000459514 67 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 MIR4498-201ENST00000577599 66 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 MIR4796-201ENST00000580742 81 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms