Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-1194P-201ENST00000516208 104 ntBASIC1.88□□□□□ -2.11
TRIM56Q9BRZ2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 Y_RNA.316-201ENST00000365118 111 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-243P-201ENST00000391140 107 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-531P-201ENST00000516694 104 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 MIR6845-201ENST00000613182 61 ntBASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRIM56Q9BRZ2 RNU6-403P-201ENST00000363163 104 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 Y_RNA.588-201ENST00000391254 102 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 MIR1257-201ENST00000408490 117 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 SNORA25.16-201ENST00000516741 121 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 AC019288.1-201ENST00000557918 224 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
TRIM56Q9BRZ2 RNU1-17P-201ENST00000363022 152 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 RNU4-32P-201ENST00000363404 141 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 MIR9-3-201ENST00000385084 90 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 RNU7-10P-201ENST00000607194 63 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 AC023934.1-201ENST00000574529 2389 ntBASIC1.85□□□□□ -2.11
TRIM56Q9BRZ2 SNORD113.3-201ENST00000364630 78 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 MIR583-201ENST00000384846 75 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 RNU7-185P-201ENST00000459215 60 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 AC023790.1-201ENST00000482174 347 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 AC140658.3-201ENST00000567603 271 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
TRIM56Q9BRZ2 MIR101-2-201ENST00000362195 79 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 SNORD36A-201ENST00000362874 73 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 MIR516A2-201ENST00000384888 90 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 MIR516A1-201ENST00000385033 90 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-466P-201ENST00000391224 103 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 RNU7-85P-201ENST00000458851 63 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-65P-201ENST00000516332 98 ntBASIC1.83□□□□□ -2.12
TRIM56Q9BRZ2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 AC048334.1-201ENST00000477975 159 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 SNORA31.2-201ENST00000516019 134 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 MIR548H5-201ENST00000580314 60 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 MIR4536-1-201ENST00000583537 88 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.82□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-1296P-201ENST00000383879 107 ntBASIC1.81□□□□□ -2.12
TRIM56Q9BRZ2 SNORD63B-201ENST00000411005 70 ntBASIC1.81□□□□□ -2.12
TRIM56Q9BRZ2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRIM56Q9BRZ2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-811P-201ENST00000384069 107 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 SNORA80D-201ENST00000384488 135 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 MIR635-201ENST00000384830 98 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 SNORD100-201ENST00000408573 76 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 AL591704.2-201ENST00000421658 181 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 snoU13.11-201ENST00000459219 104 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-765P-201ENST00000516916 99 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 MIR4712-201ENST00000583750 82 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 MIR6082-201ENST00000613604 109 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 MIR4662A-201ENST00000637499 67 ntBASIC1.8□□□□□ -2.12
TRIM56Q9BRZ2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.283-201ENST00000364798 112 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-934P-201ENST00000365154 107 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 SNORA40.18-201ENST00000391200 128 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 SNORA25.13-201ENST00000516395 103 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 RNU7-153P-201ENST00000516455 62 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 SNORD92-201ENST00000585078 85 ntBASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM56Q9BRZ2 RNU6-315P-201ENST00000362666 107 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.221-201ENST00000364248 96 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 MIR548U-201ENST00000390728 81 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 SNORD111-201ENST00000408139 94 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 SNORD83.1-201ENST00000411362 77 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 snoU13.21-201ENST00000459368 105 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 AC036111.3-201ENST00000526389 112 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 MIR4285-201ENST00000581001 85 ntBASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
TRIM56Q9BRZ2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.94-201ENST00000363068 106 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.536-201ENST00000384621 113 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 MIR519A1-201ENST00000385257 85 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 SNORD12-201ENST00000391002 90 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 RNU6-129P-201ENST00000391022 107 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 SNORA75.2-201ENST00000391138 150 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 SNORA75.3-201ENST00000391231 150 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 MIR4771-2-201ENST00000577758 74 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 MIR4771-1-201ENST00000582617 74 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 AC013244.2-201ENST00000603396 103 ntBASIC1.77□□□□□ -2.13
TRIM56Q9BRZ2 Y_RNA.13-201ENST00000362403 112 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 MIR125B2-201ENST00000385128 89 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 AC108667.1-201ENST00000428618 249 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 RNU7-106P-201ENST00000459514 67 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 MIR4498-201ENST00000577599 66 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 MIR4796-201ENST00000580742 81 ntBASIC1.76□□□□□ -2.13
TRIM56Q9BRZ2 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms