Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNA5SP133-201ENST00000363368 119 ntBASIC0.94□□□□□ -2.26
PKP4Q99569 Y_RNA.588-201ENST00000391254 102 ntBASIC0.94□□□□□ -2.26
PKP4Q99569 Y_RNA.659-201ENST00000515994 113 ntBASIC0.94□□□□□ -2.26
PKP4Q99569 MIR4771-2-201ENST00000577758 74 ntBASIC0.94□□□□□ -2.26
PKP4Q99569 MIR4491-201ENST00000581087 68 ntBASIC0.94□□□□□ -2.26
PKP4Q99569 MIR4771-1-201ENST00000582617 74 ntBASIC0.94□□□□□ -2.26
PKP4Q99569 AP001318.4-201ENST00000616637 121 ntBASIC0.94□□□□□ -2.26
PKP4Q99569 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
PKP4Q99569 Y_RNA.119-201ENST00000363301 96 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 Y_RNA.247-201ENST00000364500 92 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 Y_RNA.508-201ENST00000384502 114 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 RNU4-83P-201ENST00000410863 133 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 SNORD124-201ENST00000459577 104 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 RNU6-109P-201ENST00000516364 107 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 Y_RNA.677-201ENST00000516401 85 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 RNU6-184P-201ENST00000516514 107 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 RNU6-158P-201ENST00000517104 100 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 AL078603.1-201ENST00000603824 313 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.93□□□□□ -2.26
PKP4Q99569 MIR2052-201ENST00000636055 55 ntBASIC0.93□□□□□ -2.26
PKP4Q99569 RNU6-403P-201ENST00000363163 104 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 Y_RNA.348-201ENST00000365403 103 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 MIR125B2-201ENST00000385128 89 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 AC067940.1-201ENST00000458411 300 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 SNORA40.13-201ENST00000516379 120 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 MIR4439-201ENST00000583746 80 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 AC020891.4-201ENST00000605745 93 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 RNU6-90P-201ENST00000606352 106 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
PKP4Q99569 HSBP1P2-201ENST00000299671 229 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 RNU6-170P-201ENST00000362832 104 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 Y_RNA.95-201ENST00000363079 95 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 Y_RNA.107-201ENST00000363190 121 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 RNU4-58P-201ENST00000363192 141 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 Y_RNA.466-201ENST00000384294 113 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 SNORA72.6-201ENST00000384520 129 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 MIR548G-201ENST00000408442 89 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 AC015818.7-201ENST00000428754 109 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 AC087499.7-201ENST00000441958 109 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 SPINT5P-201ENST00000448174 155 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 RNA5SP220-201ENST00000516298 104 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 MTND5P40-201ENST00000559945 246 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 MIR4500-201ENST00000579472 76 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 AC090897.1-201ENST00000580909 226 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 MIR4676-201ENST00000583078 72 ntBASIC0.91□□□□□ -2.26
PKP4Q99569 MIR1-1-201ENST00000362147 71 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 MIR96-201ENST00000362288 78 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 SNORD114-22-201ENST00000365423 72 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 MTATP8P2-201ENST00000435212 202 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 RNU6-1194P-201ENST00000516208 104 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 RNU6-795P-201ENST00000516323 103 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 RNU6-531P-201ENST00000516694 104 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 SNORA25.16-201ENST00000516741 121 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 RNU7-156P-201ENST00000517214 74 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 AC012531.4-201ENST00000616509 177 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 AC091304.10-201ENST00000641554 121 ntBASIC0.9□□□□□ -2.27
PKP4Q99569 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
PKP4Q99569 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
PKP4Q99569 RNU6-369P-201ENST00000362515 102 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 Y_RNA.96-201ENST00000363092 109 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 Y_RNA.173-201ENST00000363776 113 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 RNU6-905P-201ENST00000384434 107 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 MIR100-201ENST00000385259 80 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 MIR938-201ENST00000401216 83 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 AC109327.2-201ENST00000448339 378 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 snoU13.18-201ENST00000459483 104 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.89□□□□□ -2.27
PKP4Q99569 RNU6-977P-201ENST00000516411 103 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 Y_RNA.694-201ENST00000516677 117 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.89□□□□□ -2.27
PKP4Q99569 MIR6082-201ENST00000613604 109 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
PKP4Q99569 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
PKP4Q99569 Y_RNA.13-201ENST00000362403 112 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 RNU6-640P-201ENST00000363693 105 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 RNU6-1163P-201ENST00000364516 107 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 RNU1-93P-201ENST00000364704 169 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
PKP4Q99569 RNU6-571P-201ENST00000384128 107 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 RNU6-364P-201ENST00000384387 107 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 Y_RNA.567-201ENST00000384736 106 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 MIR1827-201ENST00000408549 66 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 RNU6-765P-201ENST00000516916 99 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 MIR4804-201ENST00000581683 73 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 MIR4777-201ENST00000583710 86 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 SNORD92-201ENST00000585078 85 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 MIR8066-201ENST00000617280 78 ntBASIC0.88□□□□□ -2.27
PKP4Q99569 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
PKP4Q99569 Y_RNA.42-201ENST00000362660 108 ntBASIC0.87□□□□□ -2.27
PKP4Q99569 Y_RNA.355-201ENST00000365462 98 ntBASIC0.87□□□□□ -2.27
PKP4Q99569 RNU6-42P-201ENST00000384165 107 ntBASIC0.87□□□□□ -2.27
PKP4Q99569 RNU6-813P-201ENST00000384691 107 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 249.9 ms