Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 RNU7-28P-201ENST00000516759 62 ntBASIC1.58□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-881P-201ENST00000516813 102 ntBASIC1.58□□□□□ -2.16
BHLHA9Q7RTU4 Y_RNA.722-201ENST00000517279 114 ntBASIC1.58□□□□□ -2.16
BHLHA9Q7RTU4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 SNORD113.1-201ENST00000363280 73 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 SNORA70.7-201ENST00000384159 133 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 MIR516A2-201ENST00000384888 90 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 MIR516A1-201ENST00000385033 90 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 MIR518E-201ENST00000385252 88 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 RNA5SP212-201ENST00000391223 107 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 RNU7-106P-201ENST00000459514 67 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 RNA5SP168-201ENST00000516642 112 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.57□□□□□ -2.16
BHLHA9Q7RTU4 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 SNORA1.2-201ENST00000365189 134 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 Y_RNA.371-201ENST00000365591 113 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-936P-201ENST00000384005 107 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 SNORA72.6-201ENST00000384520 129 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 SNORD123-201ENST00000459473 70 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 AC141846.1-201ENST00000568348 142 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 MIR3140-201ENST00000583685 90 ntBASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.56□□□□□ -2.16
BHLHA9Q7RTU4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-1216P-201ENST00000362590 107 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-957P-201ENST00000363652 99 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-824P-201ENST00000363724 104 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 SNORA24B-201ENST00000384176 131 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 MIR597-201ENST00000384968 97 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 Y_RNA.606-201ENST00000410579 103 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 AL606490.4-201ENST00000423117 127 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 RNA5SP445-201ENST00000515889 115 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 MIR3122-201ENST00000577243 73 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 MIR4500-201ENST00000579472 76 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 MIR3675-201ENST00000583661 73 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 MIR7111-201ENST00000619751 72 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 U1.36-201ENST00000620684 176 ntBASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.55□□□□□ -2.16
BHLHA9Q7RTU4 RNU1-58P-201ENST00000362413 163 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 SNORD45.1-201ENST00000363181 77 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 MIR515-2-201ENST00000384883 83 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 MIR515-1-201ENST00000384884 83 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-604P-201ENST00000390917 100 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 RNU4-88P-201ENST00000411220 86 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-1057P-201ENST00000517162 102 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 MIR3169-201ENST00000578032 83 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 AC092634.7-201ENST00000621022 103 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
BHLHA9Q7RTU4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-895P-201ENST00000384125 103 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 AP1B1P2-201ENST00000416196 106 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 RNU7-95P-201ENST00000459222 64 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 RNU6-982P-201ENST00000516216 102 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 MIR548AO-201ENST00000579992 96 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 SNORD92-201ENST00000585078 85 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 AP000753.3-201ENST00000604083 169 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 U6.81-201ENST00000612550 106 ntBASIC1.53□□□□□ -2.16
BHLHA9Q7RTU4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.17
BHLHA9Q7RTU4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 RNA5SP493-201ENST00000364115 91 ntBASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 RNU6-949P-201ENST00000384040 107 ntBASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 RNU6-571P-201ENST00000384128 107 ntBASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 RNA5SP501-201ENST00000410990 112 ntBASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 snoU13.16-201ENST00000459350 104 ntBASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 AL662814.1-201ENST00000617364 121 ntBASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
BHLHA9Q7RTU4 RNA5SP192-201ENST00000364404 120 ntBASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 Y_RNA.258-201ENST00000364613 105 ntBASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 MIR136-201ENST00000385207 82 ntBASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 AC244023.1-201ENST00000426884 112 ntBASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 RNU7-12P-201ENST00000516030 62 ntBASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 AC133485.1-201ENST00000567176 124 ntBASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 MIR466-201ENST00000580653 84 ntBASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 AC242498.1-201ENST00000604134 111 ntBASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.51□□□□□ -2.17
BHLHA9Q7RTU4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 241.7 ms