Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 MIR6082-201ENST00000613604 109 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
E4F1Q66K89 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
E4F1Q66K89 Y_RNA.57-201ENST00000362806 113 ntBASIC1.43□□□□□ -2.18
E4F1Q66K89 SNORD58A-201ENST00000383875 65 ntBASIC1.43□□□□□ -2.18
E4F1Q66K89 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
E4F1Q66K89 SNRPGP12-201ENST00000449481 213 ntBASIC1.43□□□□□ -2.18
E4F1Q66K89 RNU6-977P-201ENST00000516411 103 ntBASIC1.43□□□□□ -2.18
E4F1Q66K89 AC026421.1-201ENST00000519101 163 ntBASIC1.43□□□□□ -2.18
E4F1Q66K89 AC015712.3-201ENST00000559380 164 ntBASIC1.43□□□□□ -2.18
E4F1Q66K89 MIR1-1-201ENST00000362147 71 ntBASIC1.42□□□□□ -2.18
E4F1Q66K89 SNORD116-10-201ENST00000363791 102 ntBASIC1.42□□□□□ -2.18
E4F1Q66K89 RNU6-571P-201ENST00000384128 107 ntBASIC1.42□□□□□ -2.18
E4F1Q66K89 Y_RNA.558-201ENST00000384685 113 ntBASIC1.42□□□□□ -2.18
E4F1Q66K89 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.42□□□□□ -2.18
E4F1Q66K89 RNU1-123P-201ENST00000458950 160 ntBASIC1.42□□□□□ -2.18
E4F1Q66K89 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
E4F1Q66K89 MIR938-201ENST00000401216 83 ntBASIC1.41□□□□□ -2.18
E4F1Q66K89 snoU13.23-201ENST00000458863 104 ntBASIC1.41□□□□□ -2.18
E4F1Q66K89 RNU6-1194P-201ENST00000516208 104 ntBASIC1.41□□□□□ -2.18
E4F1Q66K89 AC025521.1-201ENST00000621624 286 ntBASIC1.41□□□□□ -2.18
E4F1Q66K89 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
E4F1Q66K89 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
E4F1Q66K89 RNU1-17P-201ENST00000363022 152 ntBASIC1.4□□□□□ -2.19
E4F1Q66K89 SNORA67.5-201ENST00000391036 107 ntBASIC1.4□□□□□ -2.19
E4F1Q66K89 AC108210.2-201ENST00000503681 201 ntBASIC1.4□□□□□ -2.19
E4F1Q66K89 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
E4F1Q66K89 AL513043.2-201ENST00000573941 143 ntBASIC1.4□□□□□ -2.19
E4F1Q66K89 MIR8066-201ENST00000617280 78 ntBASIC1.4□□□□□ -2.19
E4F1Q66K89 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
E4F1Q66K89 MIR520F-201ENST00000384824 87 ntBASIC1.39□□□□□ -2.19
E4F1Q66K89 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
E4F1Q66K89 Y_RNA.697-201ENST00000516776 113 ntBASIC1.39□□□□□ -2.19
E4F1Q66K89 MIR4524B-201ENST00000581569 115 ntBASIC1.39□□□□□ -2.19
E4F1Q66K89 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
E4F1Q66K89 RNU6-369P-201ENST00000362515 102 ntBASIC1.38□□□□□ -2.19
E4F1Q66K89 Y_RNA.42-201ENST00000362660 108 ntBASIC1.38□□□□□ -2.19
E4F1Q66K89 SNORD73B-201ENST00000364394 72 ntBASIC1.38□□□□□ -2.19
E4F1Q66K89 SNORD100-201ENST00000408573 76 ntBASIC1.38□□□□□ -2.19
E4F1Q66K89 RNU7-102P-201ENST00000458948 62 ntBASIC1.38□□□□□ -2.19
E4F1Q66K89 MIR4804-201ENST00000581683 73 ntBASIC1.38□□□□□ -2.19
E4F1Q66K89 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
E4F1Q66K89 AL353997.5-201ENST00000618886 171 ntBASIC1.38□□□□□ -2.19
E4F1Q66K89 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
E4F1Q66K89 MIR516A2-201ENST00000384888 90 ntBASIC1.37□□□□□ -2.19
E4F1Q66K89 MIR516A1-201ENST00000385033 90 ntBASIC1.37□□□□□ -2.19
E4F1Q66K89 RNU1-119P-201ENST00000391122 165 ntBASIC1.37□□□□□ -2.19
E4F1Q66K89 RNU6-765P-201ENST00000516916 99 ntBASIC1.37□□□□□ -2.19
E4F1Q66K89 SNORD92-201ENST00000585078 85 ntBASIC1.37□□□□□ -2.19
E4F1Q66K89 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.37□□□□□ -2.19
E4F1Q66K89 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
E4F1Q66K89 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
E4F1Q66K89 RNA5SP99-201ENST00000364020 114 ntBASIC1.36□□□□□ -2.19
E4F1Q66K89 MIR635-201ENST00000384830 98 ntBASIC1.36□□□□□ -2.19
E4F1Q66K89 RNU6-762P-201ENST00000517107 102 ntBASIC1.36□□□□□ -2.19
E4F1Q66K89 Y_RNA.536-201ENST00000384621 113 ntBASIC1.35□□□□□ -2.19
E4F1Q66K89 SNORD89-201ENST00000390981 114 ntBASIC1.35□□□□□ -2.19
E4F1Q66K89 SNORA40.6-201ENST00000391153 128 ntBASIC1.35□□□□□ -2.19
E4F1Q66K89 MIR1827-201ENST00000408549 66 ntBASIC1.35□□□□□ -2.19
E4F1Q66K89 Y_RNA.609-201ENST00000410669 89 ntBASIC1.35□□□□□ -2.19
E4F1Q66K89 MIR548H5-201ENST00000580314 60 ntBASIC1.35□□□□□ -2.19
E4F1Q66K89 AC008608.1-201ENST00000603910 127 ntBASIC1.35□□□□□ -2.19
E4F1Q66K89 Y_RNA.17-201ENST00000362433 111 ntBASIC1.34□□□□□ -2.19
E4F1Q66K89 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
E4F1Q66K89 SNORD116-22-201ENST00000384430 92 ntBASIC1.34□□□□□ -2.19
E4F1Q66K89 MIR942-201ENST00000401111 86 ntBASIC1.34□□□□□ -2.19
E4F1Q66K89 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
E4F1Q66K89 SNORD63B-201ENST00000411005 70 ntBASIC1.34□□□□□ -2.19
E4F1Q66K89 RNU7-56P-201ENST00000458744 62 ntBASIC1.34□□□□□ -2.19
E4F1Q66K89 RNU7-10P-201ENST00000607194 63 ntBASIC1.34□□□□□ -2.19
E4F1Q66K89 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
E4F1Q66K89 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
E4F1Q66K89 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
E4F1Q66K89 RNY1P4-201ENST00000384595 115 ntBASIC1.33□□□□□ -2.2
E4F1Q66K89 RNU6-243P-201ENST00000391140 107 ntBASIC1.33□□□□□ -2.2
E4F1Q66K89 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.33□□□□□ -2.2
E4F1Q66K89 TRAJ51-201ENST00000504127 63 ntBASIC1.33□□□□□ -2.2
E4F1Q66K89 MIR3124-201ENST00000582636 67 ntBASIC1.33□□□□□ -2.2
E4F1Q66K89 MIR494-201ENST00000349529 81 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 Y_RNA.56-201ENST00000362798 112 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 RNU6-535P-201ENST00000384722 107 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 RNU6-1254P-201ENST00000391266 104 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 Y_RNA.593-201ENST00000410292 98 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 RNU7-106P-201ENST00000459514 67 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 SNORD124-201ENST00000459577 104 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 RMST_2.1-201ENST00000617263 136 ntBASIC1.32□□□□□ -2.2
E4F1Q66K89 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
E4F1Q66K89 MIR450A2-201ENST00000385022 100 ntBASIC1.31□□□□□ -2.2
E4F1Q66K89 MIR520H-201ENST00000385126 88 ntBASIC1.31□□□□□ -2.2
E4F1Q66K89 RNU6-482P-201ENST00000391068 107 ntBASIC1.31□□□□□ -2.2
E4F1Q66K89 RNU6-519P-201ENST00000410590 108 ntBASIC1.31□□□□□ -2.2
E4F1Q66K89 RNU6-402P-201ENST00000410678 103 ntBASIC1.31□□□□□ -2.2
E4F1Q66K89 FABP5P4-201ENST00000437203 171 ntBASIC1.31□□□□□ -2.2
E4F1Q66K89 MIR4421-201ENST00000578133 69 ntBASIC1.31□□□□□ -2.2
E4F1Q66K89 MIR4668-201ENST00000582284 70 ntBASIC1.31□□□□□ -2.2
E4F1Q66K89 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
E4F1Q66K89 MIR19B1-201ENST00000384829 87 ntBASIC1.3□□□□□ -2.2
E4F1Q66K89 SNORA26.2-201ENST00000390922 122 ntBASIC1.3□□□□□ -2.2
E4F1Q66K89 MIR1285-1-201ENST00000408593 84 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms