Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MIR502-201ENST00000606349 86 ntBASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 U6.109-201ENST00000636749 87 ntBASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.11□□□□□ -2.07
COL13A1Q5TAT6 Y_RNA.119-201ENST00000363301 96 ntBASIC2.11□□□□□ -2.07
COL13A1Q5TAT6 RNU6-652P-201ENST00000365488 107 ntBASIC2.11□□□□□ -2.07
COL13A1Q5TAT6 RNU6-1296P-201ENST00000383879 107 ntBASIC2.11□□□□□ -2.07
COL13A1Q5TAT6 RNU6-850P-201ENST00000516934 103 ntBASIC2.11□□□□□ -2.07
COL13A1Q5TAT6 Y_RNA.115-201ENST00000363272 98 ntBASIC2.1□□□□□ -2.07
COL13A1Q5TAT6 SNORD115-27-201ENST00000364430 82 ntBASIC2.1□□□□□ -2.07
COL13A1Q5TAT6 Y_RNA.316-201ENST00000365118 111 ntBASIC2.1□□□□□ -2.07
COL13A1Q5TAT6 MIR216A-201ENST00000385063 110 ntBASIC2.1□□□□□ -2.07
COL13A1Q5TAT6 MIR1236-201ENST00000408340 102 ntBASIC2.1□□□□□ -2.07
COL13A1Q5TAT6 RNU6-947P-201ENST00000516264 106 ntBASIC2.1□□□□□ -2.07
COL13A1Q5TAT6 AC036111.3-201ENST00000526389 112 ntBASIC2.1□□□□□ -2.07
COL13A1Q5TAT6 MIR4255-201ENST00000579351 72 ntBASIC2.1□□□□□ -2.07
COL13A1Q5TAT6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 RNA5SP264-201ENST00000363115 107 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 RNU6-524P-201ENST00000384270 107 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 RNU6-35P-201ENST00000384530 107 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 MIR18B-201ENST00000454574 71 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 snoU13.9-201ENST00000458927 103 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 MIR4299-201ENST00000577899 72 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 MIR6516-201ENST00000630554 81 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 MIR4662A-201ENST00000637499 67 ntBASIC2.09□□□□□ -2.07
COL13A1Q5TAT6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
COL13A1Q5TAT6 MIR103A2-201ENST00000362154 78 ntBASIC2.08□□□□□ -2.08
COL13A1Q5TAT6 RNU6-580P-201ENST00000365159 107 ntBASIC2.08□□□□□ -2.08
COL13A1Q5TAT6 RNU6-205P-201ENST00000390858 107 ntBASIC2.08□□□□□ -2.08
COL13A1Q5TAT6 MIR1185-1-201ENST00000408598 86 ntBASIC2.08□□□□□ -2.08
COL13A1Q5TAT6 AC087499.7-201ENST00000441958 109 ntBASIC2.08□□□□□ -2.08
COL13A1Q5TAT6 snoU13.25-201ENST00000458945 104 ntBASIC2.08□□□□□ -2.08
COL13A1Q5TAT6 Y_RNA.648-201ENST00000459455 110 ntBASIC2.08□□□□□ -2.08
COL13A1Q5TAT6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
COL13A1Q5TAT6 RNA5SP62-201ENST00000363457 110 ntBASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 RNU6-1065P-201ENST00000384513 106 ntBASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 MIR30A-201ENST00000385092 71 ntBASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 SNORD4B-201ENST00000459083 72 ntBASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 MIR4421-201ENST00000578133 69 ntBASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 MIR8063-201ENST00000621930 81 ntBASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
COL13A1Q5TAT6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 MIR302D-201ENST00000362275 68 ntBASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 RNU4-83P-201ENST00000410863 133 ntBASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 AC140658.3-201ENST00000567603 271 ntBASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL13A1Q5TAT6 RNU4-58P-201ENST00000363192 141 ntBASIC2.05□□□□□ -2.08
COL13A1Q5TAT6 Y_RNA.221-201ENST00000364248 96 ntBASIC2.05□□□□□ -2.08
COL13A1Q5TAT6 AC079804.2-201ENST00000490376 200 ntBASIC2.05□□□□□ -2.08
COL13A1Q5TAT6 AC079140.2-201ENST00000506193 142 ntBASIC2.05□□□□□ -2.08
COL13A1Q5TAT6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL13A1Q5TAT6 MIRLET7G-201ENST00000362280 84 ntBASIC2.04□□□□□ -2.08
COL13A1Q5TAT6 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
COL13A1Q5TAT6 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
COL13A1Q5TAT6 RNU6-1194P-201ENST00000516208 104 ntBASIC2.04□□□□□ -2.08
COL13A1Q5TAT6 MIR6086-201ENST00000638065 55 ntBASIC2.04□□□□□ -2.08
COL13A1Q5TAT6 SNORD1A-201ENST00000364968 72 ntBASIC2.03□□□□□ -2.08
COL13A1Q5TAT6 SNORA72.6-201ENST00000384520 129 ntBASIC2.03□□□□□ -2.08
COL13A1Q5TAT6 RNU6-1254P-201ENST00000391266 104 ntBASIC2.03□□□□□ -2.08
COL13A1Q5TAT6 BX276092.1-201ENST00000427368 251 ntBASIC2.03□□□□□ -2.08
COL13A1Q5TAT6 AC104435.1-201ENST00000483483 166 ntBASIC2.03□□□□□ -2.08
COL13A1Q5TAT6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
COL13A1Q5TAT6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL13A1Q5TAT6 Y_RNA.94-201ENST00000363068 106 ntBASIC2.02□□□□□ -2.09
COL13A1Q5TAT6 SNORD114-27-201ENST00000363766 70 ntBASIC2.02□□□□□ -2.09
COL13A1Q5TAT6 HMGN2P38-201ENST00000423806 265 ntBASIC2.02□□□□□ -2.09
COL13A1Q5TAT6 RNU1-92P-201ENST00000517017 135 ntBASIC2.02□□□□□ -2.09
COL13A1Q5TAT6 SNORD53B-201ENST00000577887 78 ntBASIC2.02□□□□□ -2.09
COL13A1Q5TAT6 AL353770.2-201ENST00000620024 78 ntBASIC2.02□□□□□ -2.09
COL13A1Q5TAT6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
COL13A1Q5TAT6 RNU6-315P-201ENST00000362666 107 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 RNU6-243P-201ENST00000391140 107 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 SNORD93-201ENST00000408813 74 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 AL354695.1-201ENST00000427935 228 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 MIR1273G-201ENST00000577677 100 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 MIR4491-201ENST00000581087 68 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 MIR4712-201ENST00000583750 82 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 AL096840.1-201ENST00000603287 93 ntBASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL13A1Q5TAT6 RNA5SP257-201ENST00000363023 116 ntBASIC2□□□□□ -2.09
COL13A1Q5TAT6 RNU7-85P-201ENST00000458851 63 ntBASIC2□□□□□ -2.09
COL13A1Q5TAT6 SNORA25.13-201ENST00000516395 103 ntBASIC2□□□□□ -2.09
COL13A1Q5TAT6 RNA5SP121-201ENST00000516537 101 ntBASIC2□□□□□ -2.09
COL13A1Q5TAT6 MIR3198-2-201ENST00000577868 80 ntBASIC2□□□□□ -2.09
COL13A1Q5TAT6 MIR3664-201ENST00000579074 99 ntBASIC2□□□□□ -2.09
COL13A1Q5TAT6 MIR5002-201ENST00000584713 97 ntBASIC2□□□□□ -2.09
COL13A1Q5TAT6 RNU7-10P-201ENST00000607194 63 ntBASIC2□□□□□ -2.09
COL13A1Q5TAT6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
COL13A1Q5TAT6 SNORD36A-201ENST00000362874 73 ntBASIC1.99□□□□□ -2.09
COL13A1Q5TAT6 RNU4-32P-201ENST00000363404 141 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms