Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-982P-201ENST00000516216 102 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-719P-201ENST00000516671 104 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 SNORA31.17-201ENST00000516953 127 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 MIR7978-201ENST00000636158 59 ntBASIC2.28□□□□□ -2.04
RNFT1Q5M7Z0 RNU6-668P-201ENST00000364180 107 ntBASIC2.27□□□□□ -2.05
RNFT1Q5M7Z0 SNORD114-30-201ENST00000364448 72 ntBASIC2.27□□□□□ -2.05
RNFT1Q5M7Z0 SNORD23.1-201ENST00000408212 104 ntBASIC2.27□□□□□ -2.05
RNFT1Q5M7Z0 RNA5SP24-201ENST00000516478 95 ntBASIC2.27□□□□□ -2.05
RNFT1Q5M7Z0 RNU7-193P-201ENST00000516723 65 ntBASIC2.27□□□□□ -2.05
RNFT1Q5M7Z0 Y_RNA.697-201ENST00000516776 113 ntBASIC2.27□□□□□ -2.05
RNFT1Q5M7Z0 MIR6516-201ENST00000630554 81 ntBASIC2.27□□□□□ -2.05
RNFT1Q5M7Z0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.27□□□□□ -2.05
RNFT1Q5M7Z0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 Y_RNA.258-201ENST00000364613 105 ntBASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 RNU6-1335P-201ENST00000365426 107 ntBASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 RNU6-765P-201ENST00000516916 99 ntBASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 AP003716.2-201ENST00000528260 108 ntBASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 MIR6082-201ENST00000613604 109 ntBASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RNFT1Q5M7Z0 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
RNFT1Q5M7Z0 AL161935.2-201ENST00000414627 60 ntBASIC2.25□□□□□ -2.05
RNFT1Q5M7Z0 RNA5SP82-201ENST00000516707 92 ntBASIC2.25□□□□□ -2.05
RNFT1Q5M7Z0 RNU6-1057P-201ENST00000517162 102 ntBASIC2.25□□□□□ -2.05
RNFT1Q5M7Z0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.25□□□□□ -2.05
RNFT1Q5M7Z0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RNFT1Q5M7Z0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RNFT1Q5M7Z0 RNU6-446P-201ENST00000362827 106 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 RNA5SP192-201ENST00000364404 120 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 SNORA70B-201ENST00000384210 135 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 MIR599-201ENST00000385069 95 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 MIR513A1-201ENST00000385138 129 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 RNU6-922P-201ENST00000516753 99 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 SNORA31.25-201ENST00000517242 134 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 AC138907.6-201ENST00000568401 126 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 AC138869.1-201ENST00000568623 124 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 MIR4529-201ENST00000578110 78 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 AL078603.1-201ENST00000603824 313 ntBASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNFT1Q5M7Z0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 RNA5SP117-201ENST00000365294 118 ntBASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 RNA5SP259-201ENST00000365541 109 ntBASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 RNU4-53P-201ENST00000410828 140 ntBASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 SCARNA21.1-201ENST00000515996 128 ntBASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 AC103810.8-201ENST00000607347 118 ntBASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 AC046143.2-201ENST00000609789 160 ntBASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 ZNF658B-202ENST00000615961 3375 ntBASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
RNFT1Q5M7Z0 Y_RNA.13-201ENST00000362403 112 ntBASIC2.22□□□□□ -2.05
RNFT1Q5M7Z0 SNORA6-201ENST00000384033 151 ntBASIC2.22□□□□□ -2.05
RNFT1Q5M7Z0 RNU6-1184P-201ENST00000384588 108 ntBASIC2.22□□□□□ -2.05
RNFT1Q5M7Z0 RNU6-250P-201ENST00000516958 103 ntBASIC2.22□□□□□ -2.05
RNFT1Q5M7Z0 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.22□□□□□ -2.05
RNFT1Q5M7Z0 AC073869.9-201ENST00000641610 120 ntBASIC2.22□□□□□ -2.05
RNFT1Q5M7Z0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNFT1Q5M7Z0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 RNA5SP456-201ENST00000364002 114 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 RNU6-936P-201ENST00000384005 107 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 SNORD75.2-201ENST00000408784 58 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 RNU7-24P-201ENST00000458867 62 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 snoU13.25-201ENST00000458945 104 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 RNU7-185P-201ENST00000459215 60 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 AL133373.1-201ENST00000497098 94 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.21□□□□□ -2.06
RNFT1Q5M7Z0 RNU6-369P-201ENST00000362515 102 ntBASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 U8.2-201ENST00000363156 134 ntBASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 MIR1257-201ENST00000408490 117 ntBASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 MIR1185-1-201ENST00000408598 86 ntBASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 MIR6715A-201ENST00000615929 79 ntBASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RNFT1Q5M7Z0 SNORD115-44-201ENST00000365391 82 ntBASIC2.19□□□□□ -2.06
RNFT1Q5M7Z0 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
RNFT1Q5M7Z0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.19□□□□□ -2.06
RNFT1Q5M7Z0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.19□□□□□ -2.06
RNFT1Q5M7Z0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RNFT1Q5M7Z0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RNFT1Q5M7Z0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RNFT1Q5M7Z0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RNFT1Q5M7Z0 AL596028.1-201ENST00000326971 197 ntBASIC2.18□□□□□ -2.06
RNFT1Q5M7Z0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
RNFT1Q5M7Z0 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
RNFT1Q5M7Z0 MIR5092-201ENST00000583139 88 ntBASIC2.18□□□□□ -2.06
RNFT1Q5M7Z0 AC023934.1-201ENST00000574529 2389 ntBASIC2.18□□□□□ -2.06
RNFT1Q5M7Z0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.17□□□□□ -2.06
RNFT1Q5M7Z0 RNU6-1039P-201ENST00000383931 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms