Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 Y_RNA.10-201ENST00000362371 110 ntBASIC1.25□□□□□ -2.21
CCDC178Q5BJE1 MIR520F-201ENST00000384824 87 ntBASIC1.25□□□□□ -2.21
CCDC178Q5BJE1 SNORD38.1-201ENST00000363863 68 ntBASIC1.24□□□□□ -2.21
CCDC178Q5BJE1 MIR938-201ENST00000401216 83 ntBASIC1.24□□□□□ -2.21
CCDC178Q5BJE1 MIR1276-201ENST00000408707 83 ntBASIC1.24□□□□□ -2.21
CCDC178Q5BJE1 BX276092.1-201ENST00000427368 251 ntBASIC1.24□□□□□ -2.21
CCDC178Q5BJE1 SCARNA23-201ENST00000516060 130 ntBASIC1.24□□□□□ -2.21
CCDC178Q5BJE1 RNU6-168P-201ENST00000516189 101 ntBASIC1.24□□□□□ -2.21
CCDC178Q5BJE1 AC091304.10-201ENST00000641554 121 ntBASIC1.24□□□□□ -2.21
CCDC178Q5BJE1 RNU4-58P-201ENST00000363192 141 ntBASIC1.23□□□□□ -2.21
CCDC178Q5BJE1 RNA5SP89-201ENST00000410300 108 ntBASIC1.23□□□□□ -2.21
CCDC178Q5BJE1 Y_RNA.601-201ENST00000410500 113 ntBASIC1.23□□□□□ -2.21
CCDC178Q5BJE1 RNU6-1006P-201ENST00000516998 103 ntBASIC1.23□□□□□ -2.21
CCDC178Q5BJE1 MIR548Z-201ENST00000584743 97 ntBASIC1.23□□□□□ -2.21
CCDC178Q5BJE1 AC013244.2-201ENST00000603396 103 ntBASIC1.23□□□□□ -2.21
CCDC178Q5BJE1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC178Q5BJE1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC178Q5BJE1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 Y_RNA.78-201ENST00000362970 110 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 SNORD45B-201ENST00000364617 72 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 Y_RNA.377-201ENST00000365644 108 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 Y_RNA.544-201ENST00000384650 113 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 MIR548G-201ENST00000408442 89 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 MIR4804-201ENST00000581683 73 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 RNU6-90P-201ENST00000606352 106 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 MIR6082-201ENST00000613604 109 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 AC012531.4-201ENST00000616509 177 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.22□□□□□ -2.21
CCDC178Q5BJE1 MIR101-2-201ENST00000362195 79 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.107-201ENST00000363190 121 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 RNU1-119P-201ENST00000391122 165 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 MIR1827-201ENST00000408549 66 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 AC109327.2-201ENST00000448339 378 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 RNU7-102P-201ENST00000458948 62 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.677-201ENST00000516401 85 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 RNA5SP102-201ENST00000516865 106 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC178Q5BJE1 RNU6-170P-201ENST00000362832 104 ntBASIC1.2□□□□□ -2.22
CCDC178Q5BJE1 FABP5P4-201ENST00000437203 171 ntBASIC1.2□□□□□ -2.22
CCDC178Q5BJE1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC178Q5BJE1 MIR8066-201ENST00000617280 78 ntBASIC1.2□□□□□ -2.22
CCDC178Q5BJE1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.467-201ENST00000384297 102 ntBASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 MIR520H-201ENST00000385126 88 ntBASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 AC008608.1-201ENST00000603910 127 ntBASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 RNU6-86P-201ENST00000606534 107 ntBASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 MIR6504-201ENST00000613520 61 ntBASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.818-201ENST00000618813 71 ntBASIC1.19□□□□□ -2.22
CCDC178Q5BJE1 MIR96-201ENST00000362288 78 ntBASIC1.18□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.95-201ENST00000363079 95 ntBASIC1.18□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.18□□□□□ -2.22
CCDC178Q5BJE1 RNU4-38P-201ENST00000364472 129 ntBASIC1.18□□□□□ -2.22
CCDC178Q5BJE1 AL136317.1-201ENST00000612653 226 ntBASIC1.18□□□□□ -2.22
CCDC178Q5BJE1 AP001318.4-201ENST00000616637 121 ntBASIC1.18□□□□□ -2.22
CCDC178Q5BJE1 MIR7111-201ENST00000619751 72 ntBASIC1.18□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.355-201ENST00000365462 98 ntBASIC1.17□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.567-201ENST00000384736 106 ntBASIC1.17□□□□□ -2.22
CCDC178Q5BJE1 MIR200A-201ENST00000384875 90 ntBASIC1.17□□□□□ -2.22
CCDC178Q5BJE1 SNORA40.13-201ENST00000516379 120 ntBASIC1.17□□□□□ -2.22
CCDC178Q5BJE1 SNORD92-201ENST00000585078 85 ntBASIC1.17□□□□□ -2.22
CCDC178Q5BJE1 RMST_2.1-201ENST00000617263 136 ntBASIC1.17□□□□□ -2.22
CCDC178Q5BJE1 Y_RNA.42-201ENST00000362660 108 ntBASIC1.16□□□□□ -2.22
CCDC178Q5BJE1 RNU6-1163P-201ENST00000364516 107 ntBASIC1.16□□□□□ -2.22
CCDC178Q5BJE1 RNU6-644P-201ENST00000391155 98 ntBASIC1.16□□□□□ -2.22
CCDC178Q5BJE1 RNU7-56P-201ENST00000458744 62 ntBASIC1.16□□□□□ -2.22
CCDC178Q5BJE1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC178Q5BJE1 RNU7-61P-201ENST00000515897 61 ntBASIC1.16□□□□□ -2.22
CCDC178Q5BJE1 RNU6-162P-201ENST00000516228 103 ntBASIC1.16□□□□□ -2.22
CCDC178Q5BJE1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.22
CCDC178Q5BJE1 HSBP1P2-201ENST00000299671 229 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 SNORD114-27-201ENST00000363766 70 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 SNORD114-24-201ENST00000365029 72 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 SNORD114-22-201ENST00000365423 72 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 AC004941.2-201ENST00000427009 228 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 RNU6-850P-201ENST00000516934 103 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 MIR4777-201ENST00000583710 86 ntBASIC1.15□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.93-201ENST00000363066 109 ntBASIC1.14□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.348-201ENST00000365403 103 ntBASIC1.14□□□□□ -2.23
CCDC178Q5BJE1 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
CCDC178Q5BJE1 SNORD100-201ENST00000408573 76 ntBASIC1.14□□□□□ -2.23
CCDC178Q5BJE1 RNY4P30-201ENST00000410216 95 ntBASIC1.14□□□□□ -2.23
CCDC178Q5BJE1 RNU6-1110P-201ENST00000516462 101 ntBASIC1.14□□□□□ -2.23
CCDC178Q5BJE1 MIR6857-201ENST00000613267 93 ntBASIC1.14□□□□□ -2.23
CCDC178Q5BJE1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.57-201ENST00000362806 113 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 RNU1-124P-201ENST00000363861 145 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 RNU6-535P-201ENST00000384722 107 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 256.1 ms