Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 Y_RNA.611-201ENST00000410682 108 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 RNU4-83P-201ENST00000410863 133 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 BX276092.1-201ENST00000427368 251 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 RNU7-171P-201ENST00000459581 62 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 AL512598.1-201ENST00000610158 273 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
ITGA1P56199 Y_RNA.426-201ENST00000384068 113 ntBASIC1.58□□□□□ -2.16
ITGA1P56199 MIR548BB-201ENST00000626714 66 ntBASIC1.58□□□□□ -2.16
ITGA1P56199 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
ITGA1P56199 RNU6-53P-201ENST00000365367 106 ntBASIC1.57□□□□□ -2.16
ITGA1P56199 SNORD93-201ENST00000408813 74 ntBASIC1.57□□□□□ -2.16
ITGA1P56199 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
ITGA1P56199 MIR4491-201ENST00000581087 68 ntBASIC1.57□□□□□ -2.16
ITGA1P56199 AC006160.2-201ENST00000637708 154 ntBASIC1.57□□□□□ -2.16
ITGA1P56199 Y_RNA.588-201ENST00000391254 102 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 RNU6-519P-201ENST00000410590 108 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 RNU6-1054P-201ENST00000411293 104 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 RN7SKP88-201ENST00000516847 250 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 7SK.8-201ENST00000612110 250 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.56□□□□□ -2.16
ITGA1P56199 7SK.11-201ENST00000615477 250 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 7SK.13-201ENST00000622040 250 ntBASIC1.56□□□□□ -2.16
ITGA1P56199 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ITGA1P56199 RNU4-58P-201ENST00000363192 141 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 SNORD115-27-201ENST00000364430 82 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 RNU1-36P-201ENST00000365130 165 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 Y_RNA.355-201ENST00000365462 98 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 RNU6-787P-201ENST00000384032 107 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 MIR1255A-201ENST00000408338 113 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 RNA5SP225-201ENST00000410874 135 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 AC048334.1-201ENST00000477975 159 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 RNU6-531P-201ENST00000516694 104 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 SNORA25.16-201ENST00000516741 121 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 MIR4666B-201ENST00000578142 81 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.55□□□□□ -2.16
ITGA1P56199 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
ITGA1P56199 Y_RNA.330-201ENST00000365230 109 ntBASIC1.54□□□□□ -2.16
ITGA1P56199 SNORA72.6-201ENST00000384520 129 ntBASIC1.54□□□□□ -2.16
ITGA1P56199 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.54□□□□□ -2.16
ITGA1P56199 AC087499.7-201ENST00000441958 109 ntBASIC1.54□□□□□ -2.16
ITGA1P56199 snoU13.21-201ENST00000459368 105 ntBASIC1.54□□□□□ -2.16
ITGA1P56199 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
ITGA1P56199 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.54□□□□□ -2.16
ITGA1P56199 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
ITGA1P56199 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ITGA1P56199 Y_RNA.437-201ENST00000384113 113 ntBASIC1.53□□□□□ -2.16
ITGA1P56199 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
ITGA1P56199 MIR519C-201ENST00000385053 87 ntBASIC1.53□□□□□ -2.16
ITGA1P56199 MIR1257-201ENST00000408490 117 ntBASIC1.53□□□□□ -2.16
ITGA1P56199 RNU7-185P-201ENST00000459215 60 ntBASIC1.53□□□□□ -2.16
ITGA1P56199 SNORA31.2-201ENST00000516019 134 ntBASIC1.53□□□□□ -2.16
ITGA1P56199 AC023934.1-201ENST00000574529 2389 ntBASIC1.53□□□□□ -2.16
ITGA1P56199 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.53□□□□□ -2.16
ITGA1P56199 RNU6-403P-201ENST00000363163 104 ntBASIC1.52□□□□□ -2.17
ITGA1P56199 SNORD113.3-201ENST00000364630 78 ntBASIC1.52□□□□□ -2.17
ITGA1P56199 MIR518E-201ENST00000385252 88 ntBASIC1.52□□□□□ -2.17
ITGA1P56199 SNORA75.2-201ENST00000391138 150 ntBASIC1.52□□□□□ -2.17
ITGA1P56199 SNORA75.3-201ENST00000391231 150 ntBASIC1.52□□□□□ -2.17
ITGA1P56199 Y_RNA.607-201ENST00000410597 98 ntBASIC1.52□□□□□ -2.17
ITGA1P56199 AL645939.4-201ENST00000604495 135 ntBASIC1.52□□□□□ -2.17
ITGA1P56199 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.51□□□□□ -2.17
ITGA1P56199 SNORD83.1-201ENST00000411362 77 ntBASIC1.51□□□□□ -2.17
ITGA1P56199 SNORD4B-201ENST00000459083 72 ntBASIC1.51□□□□□ -2.17
ITGA1P56199 Y_RNA.648-201ENST00000459455 110 ntBASIC1.51□□□□□ -2.17
ITGA1P56199 AC036111.3-201ENST00000526389 112 ntBASIC1.51□□□□□ -2.17
ITGA1P56199 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 Y_RNA.313-201ENST00000365095 103 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 MIR516A2-201ENST00000384888 90 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 MIR516A1-201ENST00000385033 90 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 RNU6-1194P-201ENST00000516208 104 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 RNA5SP395-201ENST00000516567 118 ntBASIC1.5□□□□□ -2.17
ITGA1P56199 RNU6-934P-201ENST00000365154 107 ntBASIC1.49□□□□□ -2.17
ITGA1P56199 Y_RNA.363-201ENST00000365529 113 ntBASIC1.49□□□□□ -2.17
ITGA1P56199 RNU6-524P-201ENST00000384270 107 ntBASIC1.49□□□□□ -2.17
ITGA1P56199 RNU6-1254P-201ENST00000391266 104 ntBASIC1.49□□□□□ -2.17
ITGA1P56199 RNU7-85P-201ENST00000458851 63 ntBASIC1.49□□□□□ -2.17
ITGA1P56199 RNU6-902P-201ENST00000517212 91 ntBASIC1.49□□□□□ -2.17
ITGA1P56199 SNORD36A-201ENST00000362874 73 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 SNORD115-37-201ENST00000363768 82 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 RNU6-243P-201ENST00000391140 107 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 AC093729.1-201ENST00000513074 128 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 MIR4771-2-201ENST00000577758 74 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 MIR4771-1-201ENST00000582617 74 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 MIR6082-201ENST00000613604 109 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 AC106800.4-201ENST00000614905 153 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
ITGA1P56199 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ITGA1P56199 MIR101-2-201ENST00000362195 79 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 Y_RNA.13-201ENST00000362403 112 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 RNU4-32P-201ENST00000363404 141 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 253.6 ms