Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SNORD83.1-201ENST00000411362 77 ntBASIC1.22□□□□□ -2.21
MMP13P45452 BX276092.1-201ENST00000427368 251 ntBASIC1.22□□□□□ -2.21
MMP13P45452 AL603825.1-201ENST00000438481 80 ntBASIC1.22□□□□□ -2.21
MMP13P45452 RN7SKP88-201ENST00000516847 250 ntBASIC1.22□□□□□ -2.21
MMP13P45452 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.22□□□□□ -2.21
MMP13P45452 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
MMP13P45452 MIR4500-201ENST00000579472 76 ntBASIC1.22□□□□□ -2.21
MMP13P45452 RNU6-90P-201ENST00000606352 106 ntBASIC1.22□□□□□ -2.21
MMP13P45452 7SK.8-201ENST00000612110 250 ntBASIC1.22□□□□□ -2.21
MMP13P45452 7SK.11-201ENST00000615477 250 ntBASIC1.22□□□□□ -2.21
MMP13P45452 7SK.13-201ENST00000622040 250 ntBASIC1.22□□□□□ -2.21
MMP13P45452 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
MMP13P45452 Y_RNA.119-201ENST00000363301 96 ntBASIC1.21□□□□□ -2.22
MMP13P45452 Y_RNA.330-201ENST00000365230 109 ntBASIC1.21□□□□□ -2.22
MMP13P45452 RNU6-972P-201ENST00000391208 107 ntBASIC1.21□□□□□ -2.22
MMP13P45452 AL513043.2-201ENST00000573941 143 ntBASIC1.21□□□□□ -2.22
MMP13P45452 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MMP13P45452 RNU1-36P-201ENST00000365130 165 ntBASIC1.2□□□□□ -2.22
MMP13P45452 RNU6-497P-201ENST00000365316 104 ntBASIC1.2□□□□□ -2.22
MMP13P45452 RNU6-675P-201ENST00000384236 104 ntBASIC1.2□□□□□ -2.22
MMP13P45452 MIR450A2-201ENST00000385022 100 ntBASIC1.2□□□□□ -2.22
MMP13P45452 MT-TF-201ENST00000387314 71 ntBASIC1.2□□□□□ -2.22
MMP13P45452 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
MMP13P45452 AL591704.2-201ENST00000421658 181 ntBASIC1.2□□□□□ -2.22
MMP13P45452 SNRPGP12-201ENST00000449481 213 ntBASIC1.2□□□□□ -2.22
MMP13P45452 RNU6-531P-201ENST00000516694 104 ntBASIC1.2□□□□□ -2.22
MMP13P45452 AC023827.1-201ENST00000569247 97 ntBASIC1.2□□□□□ -2.22
MMP13P45452 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
MMP13P45452 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
MMP13P45452 RNU6-1152P-201ENST00000384576 107 ntBASIC1.19□□□□□ -2.22
MMP13P45452 Y_RNA.620-201ENST00000411009 88 ntBASIC1.19□□□□□ -2.22
MMP13P45452 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.19□□□□□ -2.22
MMP13P45452 MTND5P40-201ENST00000559945 246 ntBASIC1.19□□□□□ -2.22
MMP13P45452 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
MMP13P45452 Y_RNA.191-201ENST00000363972 113 ntBASIC1.18□□□□□ -2.22
MMP13P45452 SNORD115-27-201ENST00000364430 82 ntBASIC1.18□□□□□ -2.22
MMP13P45452 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
MMP13P45452 RNU7-185P-201ENST00000459215 60 ntBASIC1.18□□□□□ -2.22
MMP13P45452 RNU7-21P-201ENST00000459430 62 ntBASIC1.18□□□□□ -2.22
MMP13P45452 RNU6-850P-201ENST00000516934 103 ntBASIC1.18□□□□□ -2.22
MMP13P45452 MIR4668-201ENST00000582284 70 ntBASIC1.18□□□□□ -2.22
MMP13P45452 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
MMP13P45452 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
MMP13P45452 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
MMP13P45452 AC023934.1-201ENST00000574529 2389 ntBASIC1.17□□□□□ -2.22
MMP13P45452 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
MMP13P45452 SNORD116-10-201ENST00000363791 102 ntBASIC1.17□□□□□ -2.22
MMP13P45452 Y_RNA.327-201ENST00000365201 102 ntBASIC1.17□□□□□ -2.22
MMP13P45452 RNY1P4-201ENST00000384595 115 ntBASIC1.17□□□□□ -2.22
MMP13P45452 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
MMP13P45452 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
MMP13P45452 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.17□□□□□ -2.22
MMP13P45452 SNORD93-201ENST00000408813 74 ntBASIC1.17□□□□□ -2.22
MMP13P45452 MIR18B-201ENST00000454574 71 ntBASIC1.17□□□□□ -2.22
MMP13P45452 AC022137.1-201ENST00000483735 151 ntBASIC1.17□□□□□ -2.22
MMP13P45452 RNU7-40P-201ENST00000516397 64 ntBASIC1.17□□□□□ -2.22
MMP13P45452 MIR4498-201ENST00000577599 66 ntBASIC1.17□□□□□ -2.22
MMP13P45452 MIR1245B-201ENST00000636115 69 ntBASIC1.17□□□□□ -2.22
MMP13P45452 SNORD113.3-201ENST00000364630 78 ntBASIC1.16□□□□□ -2.22
MMP13P45452 RNU6-787P-201ENST00000384032 107 ntBASIC1.16□□□□□ -2.22
MMP13P45452 Y_RNA.609-201ENST00000410669 89 ntBASIC1.16□□□□□ -2.22
MMP13P45452 RNU7-106P-201ENST00000459514 67 ntBASIC1.16□□□□□ -2.22
MMP13P45452 SNORD79.1-201ENST00000516069 84 ntBASIC1.16□□□□□ -2.22
MMP13P45452 AL359821.1-201ENST00000605519 182 ntBASIC1.16□□□□□ -2.22
MMP13P45452 MIR8066-201ENST00000617280 78 ntBASIC1.16□□□□□ -2.22
MMP13P45452 Y_RNA.13-201ENST00000362403 112 ntBASIC1.15□□□□□ -2.23
MMP13P45452 RNU6-403P-201ENST00000363163 104 ntBASIC1.15□□□□□ -2.23
MMP13P45452 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
MMP13P45452 RNU7-85P-201ENST00000458851 63 ntBASIC1.15□□□□□ -2.23
MMP13P45452 MIR4771-2-201ENST00000577758 74 ntBASIC1.15□□□□□ -2.23
MMP13P45452 MIR4771-1-201ENST00000582617 74 ntBASIC1.15□□□□□ -2.23
MMP13P45452 AC013244.2-201ENST00000603396 103 ntBASIC1.15□□□□□ -2.23
MMP13P45452 AC106800.4-201ENST00000614905 153 ntBASIC1.15□□□□□ -2.23
MMP13P45452 RNU6-934P-201ENST00000365154 107 ntBASIC1.14□□□□□ -2.23
MMP13P45452 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
MMP13P45452 RNU6-820P-201ENST00000384273 107 ntBASIC1.14□□□□□ -2.23
MMP13P45452 SNORD116-22-201ENST00000384430 92 ntBASIC1.14□□□□□ -2.23
MMP13P45452 SNORD38.2-201ENST00000384470 69 ntBASIC1.14□□□□□ -2.23
MMP13P45452 MIR516A2-201ENST00000384888 90 ntBASIC1.14□□□□□ -2.23
MMP13P45452 MIR516A1-201ENST00000385033 90 ntBASIC1.14□□□□□ -2.23
MMP13P45452 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.14□□□□□ -2.23
MMP13P45452 Y_RNA.42-201ENST00000362660 108 ntBASIC1.13□□□□□ -2.23
MMP13P45452 Y_RNA.57-201ENST00000362806 113 ntBASIC1.13□□□□□ -2.23
MMP13P45452 Y_RNA.96-201ENST00000363092 109 ntBASIC1.13□□□□□ -2.23
MMP13P45452 RNY1P1-201ENST00000364372 112 ntBASIC1.13□□□□□ -2.23
MMP13P45452 Y_RNA.338-201ENST00000365320 114 ntBASIC1.13□□□□□ -2.23
MMP13P45452 RNU6-979P-201ENST00000383896 107 ntBASIC1.13□□□□□ -2.23
MMP13P45452 RNU6-571P-201ENST00000384128 107 ntBASIC1.13□□□□□ -2.23
MMP13P45452 SNORA72.6-201ENST00000384520 129 ntBASIC1.13□□□□□ -2.23
MMP13P45452 Y_RNA.4-201ENST00000362333 112 ntBASIC1.12□□□□□ -2.23
MMP13P45452 SNORD36A-201ENST00000362874 73 ntBASIC1.12□□□□□ -2.23
MMP13P45452 MIR125B2-201ENST00000385128 89 ntBASIC1.12□□□□□ -2.23
MMP13P45452 snoU13.11-201ENST00000459219 104 ntBASIC1.12□□□□□ -2.23
MMP13P45452 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
MMP13P45452 TRAJ51-201ENST00000504127 63 ntBASIC1.12□□□□□ -2.23
MMP13P45452 MIR5588-201ENST00000581890 63 ntBASIC1.12□□□□□ -2.23
MMP13P45452 AC008608.1-201ENST00000603910 127 ntBASIC1.12□□□□□ -2.23
MMP13P45452 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
MMP13P45452 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.12□□□□□ -2.23
MMP13P45452 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms