Protein–RNA interactions for Protein: P43088

PTGFR, Prostaglandin F2-alpha receptor, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRP43088 MIR3128-201ENST00000581957 66 ntBASIC-0.34□□□□□ -2.46
PTGFRP43088 MIR6779-201ENST00000617283 64 ntBASIC-0.34□□□□□ -2.46
PTGFRP43088 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.35□□□□□ -2.47
PTGFRP43088 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.35□□□□□ -2.47
PTGFRP43088 RNU6-588P-201ENST00000410281 105 ntBASIC-0.35□□□□□ -2.47
PTGFRP43088 RNA5SP484-201ENST00000458857 111 ntBASIC-0.35□□□□□ -2.47
PTGFRP43088 AC062037.2-201ENST00000610137 73 ntBASIC-0.35□□□□□ -2.47
PTGFRP43088 MIR6514-201ENST00000622549 70 ntBASIC-0.35□□□□□ -2.47
PTGFRP43088 MIR148A-201ENST00000362215 68 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 RNA5SP457-201ENST00000363657 124 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 MIR568-201ENST00000385036 95 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 SNORD63B-201ENST00000411005 70 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 RNU7-74P-201ENST00000459104 62 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 RNU6-111P-201ENST00000517179 105 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 NAMPTP3-201ENST00000569273 224 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 MIR3920-201ENST00000581751 86 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 AL670379.3-201ENST00000605040 251 ntBASIC-0.36□□□□□ -2.47
PTGFRP43088 RNU6-170P-201ENST00000362832 104 ntBASIC-0.37□□□□□ -2.47
PTGFRP43088 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.37□□□□□ -2.47
PTGFRP43088 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.37□□□□□ -2.47
PTGFRP43088 RNU6-865P-201ENST00000364772 107 ntBASIC-0.37□□□□□ -2.47
PTGFRP43088 SNORD18B-201ENST00000365659 72 ntBASIC-0.37□□□□□ -2.47
PTGFRP43088 RNU6-47P-201ENST00000383866 107 ntBASIC-0.37□□□□□ -2.47
PTGFRP43088 RNU7-195P-201ENST00000458793 62 ntBASIC-0.37□□□□□ -2.47
PTGFRP43088 SNORA25.13-201ENST00000516395 103 ntBASIC-0.37□□□□□ -2.47
PTGFRP43088 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 RNU6-571P-201ENST00000384128 107 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 AL603914.1-201ENST00000401964 204 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 AC109327.2-201ENST00000448339 378 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 RNU7-13P-201ENST00000516413 62 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
PTGFRP43088 AC009779.6-201ENST00000603972 165 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 MIR376B-201ENST00000614515 100 ntBASIC-0.38□□□□□ -2.47
PTGFRP43088 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.39□□□□□ -2.47
PTGFRP43088 SNORA20.1-201ENST00000364790 130 ntBASIC-0.39□□□□□ -2.47
PTGFRP43088 SNORD115-35-201ENST00000365122 82 ntBASIC-0.39□□□□□ -2.47
PTGFRP43088 RNU6-239P-201ENST00000390990 99 ntBASIC-0.39□□□□□ -2.47
PTGFRP43088 RNU7-121P-201ENST00000516604 62 ntBASIC-0.39□□□□□ -2.47
PTGFRP43088 RNY4P20-201ENST00000516678 93 ntBASIC-0.39□□□□□ -2.47
PTGFRP43088 AC084368.1-201ENST00000620935 65 ntBASIC-0.39□□□□□ -2.47
PTGFRP43088 RNU6-508P-201ENST00000363231 103 ntBASIC-0.4□□□□□ -2.47
PTGFRP43088 RNU6-309P-201ENST00000364573 106 ntBASIC-0.4□□□□□ -2.47
PTGFRP43088 SNORD114-12-201ENST00000365400 75 ntBASIC-0.4□□□□□ -2.47
PTGFRP43088 RNU6-616P-201ENST00000384353 107 ntBASIC-0.4□□□□□ -2.47
PTGFRP43088 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.4□□□□□ -2.47
PTGFRP43088 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.4□□□□□ -2.47
PTGFRP43088 MTND5P40-201ENST00000559945 246 ntBASIC-0.4□□□□□ -2.47
PTGFRP43088 RNU4-84P-201ENST00000364200 139 ntBASIC-0.41□□□□□ -2.48
PTGFRP43088 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.41□□□□□ -2.48
PTGFRP43088 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.41□□□□□ -2.48
PTGFRP43088 MIR214-201ENST00000385214 110 ntBASIC-0.41□□□□□ -2.48
PTGFRP43088 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.41□□□□□ -2.48
PTGFRP43088 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.41□□□□□ -2.48
PTGFRP43088 AL137067.1-201ENST00000615933 120 ntBASIC-0.41□□□□□ -2.48
PTGFRP43088 RNY1P11-201ENST00000363759 113 ntBASIC-0.42□□□□□ -2.48
PTGFRP43088 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.42□□□□□ -2.48
PTGFRP43088 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.42□□□□□ -2.48
PTGFRP43088 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.42□□□□□ -2.48
PTGFRP43088 RNU6-524P-201ENST00000384270 107 ntBASIC-0.42□□□□□ -2.48
PTGFRP43088 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.42□□□□□ -2.48
PTGFRP43088 MIR3658-201ENST00000636291 56 ntBASIC-0.42□□□□□ -2.48
PTGFRP43088 RNU1-141P-201ENST00000364623 158 ntBASIC-0.43□□□□□ -2.48
PTGFRP43088 MIR516B1-201ENST00000385211 90 ntBASIC-0.43□□□□□ -2.48
PTGFRP43088 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.43□□□□□ -2.48
PTGFRP43088 AC108081.1-201ENST00000604358 221 ntBASIC-0.43□□□□□ -2.48
PTGFRP43088 MIR3666-201ENST00000607845 111 ntBASIC-0.43□□□□□ -2.48
PTGFRP43088 U4.1-201ENST00000620349 87 ntBASIC-0.43□□□□□ -2.48
PTGFRP43088 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.44□□□□□ -2.48
PTGFRP43088 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.44□□□□□ -2.48
PTGFRP43088 MIR106A-201ENST00000384870 81 ntBASIC-0.44□□□□□ -2.48
PTGFRP43088 SNORD37.2-201ENST00000391075 66 ntBASIC-0.44□□□□□ -2.48
PTGFRP43088 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.44□□□□□ -2.48
PTGFRP43088 RNU7-106P-201ENST00000459514 67 ntBASIC-0.44□□□□□ -2.48
PTGFRP43088 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
PTGFRP43088 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.44□□□□□ -2.48
PTGFRP43088 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 SNORD49B-201ENST00000365172 72 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 SNORD115-44-201ENST00000365391 82 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 MIR329-2-201ENST00000385029 84 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 RNU6-327P-201ENST00000516270 127 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 RNU6-850P-201ENST00000516934 103 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 AC022559.1-201ENST00000520905 205 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 AC072026.1-201ENST00000605023 201 ntBASIC-0.45□□□□□ -2.48
PTGFRP43088 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.46□□□□□ -2.48
PTGFRP43088 SNORD115-19-201ENST00000363098 82 ntBASIC-0.46□□□□□ -2.48
PTGFRP43088 SNORD115-18-201ENST00000363293 82 ntBASIC-0.46□□□□□ -2.48
PTGFRP43088 SNORD115-17-201ENST00000364612 82 ntBASIC-0.46□□□□□ -2.48
PTGFRP43088 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.46□□□□□ -2.48
PTGFRP43088 MIR34C-201ENST00000384831 77 ntBASIC-0.46□□□□□ -2.48
PTGFRP43088 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.46□□□□□ -2.48
PTGFRP43088 AC093423.1-201ENST00000440817 142 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 253 ms