Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MIR4698-201ENST00000577795 80 ntBASIC0.94□□□□□ -2.26
KRT9P35527 AC006254.2-201ENST00000603259 279 ntBASIC0.94□□□□□ -2.26
KRT9P35527 AC242498.1-201ENST00000604134 111 ntBASIC0.94□□□□□ -2.26
KRT9P35527 AC096720.1-201ENST00000604441 183 ntBASIC0.94□□□□□ -2.26
KRT9P35527 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
KRT9P35527 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
KRT9P35527 Y_RNA.30-201ENST00000362572 97 ntBASIC0.93□□□□□ -2.26
KRT9P35527 Y_RNA.107-201ENST00000363190 121 ntBASIC0.93□□□□□ -2.26
KRT9P35527 SNORD114-10-201ENST00000363409 72 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-865P-201ENST00000364772 107 ntBASIC0.93□□□□□ -2.26
KRT9P35527 MT-TN-201ENST00000387400 73 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-447P-201ENST00000410293 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-1118P-201ENST00000410382 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-1076P-201ENST00000410397 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-355P-201ENST00000410427 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-791P-201ENST00000410467 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-705P-201ENST00000410601 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-1100P-201ENST00000410691 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-860P-201ENST00000410860 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-1217P-201ENST00000411276 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-785P-201ENST00000411324 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 snoU13.2-201ENST00000459201 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 Y_RNA.659-201ENST00000515994 113 ntBASIC0.93□□□□□ -2.26
KRT9P35527 RNU6-1110P-201ENST00000516462 101 ntBASIC0.93□□□□□ -2.26
KRT9P35527 AC141846.1-201ENST00000568348 142 ntBASIC0.93□□□□□ -2.26
KRT9P35527 MIR5582-201ENST00000579697 68 ntBASIC0.93□□□□□ -2.26
KRT9P35527 AC025627.3-201ENST00000582078 182 ntBASIC0.93□□□□□ -2.26
KRT9P35527 MIR4264-201ENST00000583520 66 ntBASIC0.93□□□□□ -2.26
KRT9P35527 U6.90-201ENST00000614007 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 AC105081.1-201ENST00000617727 106 ntBASIC0.93□□□□□ -2.26
KRT9P35527 U6.70-201ENST00000620287 104 ntBASIC0.93□□□□□ -2.26
KRT9P35527 MIR377-201ENST00000362145 69 ntBASIC0.92□□□□□ -2.26
KRT9P35527 Y_RNA.98-201ENST00000363109 102 ntBASIC0.92□□□□□ -2.26
KRT9P35527 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
KRT9P35527 SNORD45B-201ENST00000364617 72 ntBASIC0.92□□□□□ -2.26
KRT9P35527 RNY1P13-201ENST00000365030 105 ntBASIC0.92□□□□□ -2.26
KRT9P35527 RNU6-905P-201ENST00000384434 107 ntBASIC0.92□□□□□ -2.26
KRT9P35527 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.92□□□□□ -2.26
KRT9P35527 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.92□□□□□ -2.26
KRT9P35527 MTATP8P2-201ENST00000435212 202 ntBASIC0.92□□□□□ -2.26
KRT9P35527 RNU7-137P-201ENST00000516788 62 ntBASIC0.92□□□□□ -2.26
KRT9P35527 AL136317.1-201ENST00000612653 226 ntBASIC0.92□□□□□ -2.26
KRT9P35527 AL442128.1-201ENST00000615151 90 ntBASIC0.92□□□□□ -2.26
KRT9P35527 RNU6-1313P-201ENST00000362622 102 ntBASIC0.91□□□□□ -2.26
KRT9P35527 RNU6-640P-201ENST00000363693 105 ntBASIC0.91□□□□□ -2.26
KRT9P35527 Y_RNA.369-201ENST00000365568 117 ntBASIC0.91□□□□□ -2.26
KRT9P35527 Y_RNA.374-201ENST00000365606 101 ntBASIC0.91□□□□□ -2.26
KRT9P35527 Y_RNA.377-201ENST00000365644 108 ntBASIC0.91□□□□□ -2.26
KRT9P35527 Y_RNA.448-201ENST00000384185 108 ntBASIC0.91□□□□□ -2.26
KRT9P35527 RNU6-1201P-201ENST00000384227 107 ntBASIC0.91□□□□□ -2.26
KRT9P35527 MIR1827-201ENST00000408549 66 ntBASIC0.91□□□□□ -2.26
KRT9P35527 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.91□□□□□ -2.26
KRT9P35527 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
KRT9P35527 RNU7-62P-201ENST00000458856 62 ntBASIC0.91□□□□□ -2.26
KRT9P35527 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
KRT9P35527 RNU6-158P-201ENST00000517104 100 ntBASIC0.91□□□□□ -2.26
KRT9P35527 AC133485.1-201ENST00000567176 124 ntBASIC0.91□□□□□ -2.26
KRT9P35527 AL662814.1-201ENST00000617364 121 ntBASIC0.91□□□□□ -2.26
KRT9P35527 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.91□□□□□ -2.26
KRT9P35527 RNU6-170P-201ENST00000362832 104 ntBASIC0.9□□□□□ -2.27
KRT9P35527 Y_RNA.96-201ENST00000363092 109 ntBASIC0.9□□□□□ -2.27
KRT9P35527 Y_RNA.220-201ENST00000364244 109 ntBASIC0.9□□□□□ -2.27
KRT9P35527 RNU6-949P-201ENST00000384040 107 ntBASIC0.9□□□□□ -2.27
KRT9P35527 SNORD38.2-201ENST00000384470 69 ntBASIC0.9□□□□□ -2.27
KRT9P35527 AL353813.1-201ENST00000440700 253 ntBASIC0.9□□□□□ -2.27
KRT9P35527 RNU7-48P-201ENST00000458875 63 ntBASIC0.9□□□□□ -2.27
KRT9P35527 snoU13.21-201ENST00000459368 105 ntBASIC0.9□□□□□ -2.27
KRT9P35527 RNU6-795P-201ENST00000516323 103 ntBASIC0.9□□□□□ -2.27
KRT9P35527 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
KRT9P35527 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
KRT9P35527 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.9□□□□□ -2.27
KRT9P35527 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
KRT9P35527 SNORD38.1-201ENST00000363863 68 ntBASIC0.89□□□□□ -2.27
KRT9P35527 RNU6-580P-201ENST00000365159 107 ntBASIC0.89□□□□□ -2.27
KRT9P35527 RNU6-1321P-201ENST00000390905 107 ntBASIC0.89□□□□□ -2.27
KRT9P35527 SNORD99-201ENST00000408612 74 ntBASIC0.89□□□□□ -2.27
KRT9P35527 RNU6-1165P-201ENST00000410119 107 ntBASIC0.89□□□□□ -2.27
KRT9P35527 RNU6-90P-201ENST00000606352 106 ntBASIC0.89□□□□□ -2.27
KRT9P35527 AC012531.4-201ENST00000616509 177 ntBASIC0.89□□□□□ -2.27
KRT9P35527 MIR6740-201ENST00000618268 113 ntBASIC0.89□□□□□ -2.27
KRT9P35527 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.89□□□□□ -2.27
KRT9P35527 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRT9P35527 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRT9P35527 AC023934.1-201ENST00000574529 2389 ntBASIC0.88□□□□□ -2.27
KRT9P35527 Y_RNA.95-201ENST00000363079 95 ntBASIC0.88□□□□□ -2.27
KRT9P35527 RNU6-1131P-201ENST00000364955 107 ntBASIC0.88□□□□□ -2.27
KRT9P35527 MIR34C-201ENST00000384831 77 ntBASIC0.88□□□□□ -2.27
KRT9P35527 AC004941.2-201ENST00000427009 228 ntBASIC0.88□□□□□ -2.27
KRT9P35527 SPINT5P-201ENST00000448174 155 ntBASIC0.88□□□□□ -2.27
KRT9P35527 MTND5P40-201ENST00000559945 246 ntBASIC0.88□□□□□ -2.27
KRT9P35527 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.88□□□□□ -2.27
KRT9P35527 MIR376B-201ENST00000614515 100 ntBASIC0.88□□□□□ -2.27
KRT9P35527 AP001362.1-201ENST00000625165 124 ntBASIC0.88□□□□□ -2.27
KRT9P35527 MIR1-1-201ENST00000362147 71 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
KRT9P35527 RNU6-294P-201ENST00000364999 102 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MIR563-201ENST00000385080 79 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MIR100-201ENST00000385259 80 ntBASIC0.87□□□□□ -2.27
KRT9P35527 MT-TF-201ENST00000387314 71 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms