Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-476P-201ENST00000384726 107 ntBASIC0.73□□□□□ -2.29
HOXA13P31271 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.73□□□□□ -2.29
HOXA13P31271 AC090897.1-201ENST00000580909 226 ntBASIC0.73□□□□□ -2.29
HOXA13P31271 MIR6082-201ENST00000613604 109 ntBASIC0.73□□□□□ -2.29
HOXA13P31271 RNU6-1290P-201ENST00000362957 109 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 RNU4-67P-201ENST00000364569 141 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 RNU6-1144P-201ENST00000384247 104 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 SNORD116-21-201ENST00000384507 92 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 RNU6-816P-201ENST00000390914 107 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 RNU6-1268P-201ENST00000391214 107 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 RNU6-1239P-201ENST00000391310 107 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 AC244098.3-201ENST00000424803 96 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 RNU7-48P-201ENST00000458875 63 ntBASIC0.72□□□□□ -2.29
HOXA13P31271 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
HOXA13P31271 Y_RNA.119-201ENST00000363301 96 ntBASIC0.71□□□□□ -2.3
HOXA13P31271 RNY4P6-201ENST00000363667 96 ntBASIC0.71□□□□□ -2.3
HOXA13P31271 MIR598-201ENST00000384868 97 ntBASIC0.71□□□□□ -2.3
HOXA13P31271 MIR759-201ENST00000390224 91 ntBASIC0.71□□□□□ -2.3
HOXA13P31271 RNU6-1064P-201ENST00000410626 104 ntBASIC0.71□□□□□ -2.3
HOXA13P31271 AL162726.3-218ENST00000636401 95 ntBASIC0.71□□□□□ -2.3
HOXA13P31271 Y_RNA.32-201ENST00000362589 110 ntBASIC0.7□□□□□ -2.3
HOXA13P31271 Y_RNA.328-201ENST00000365208 113 ntBASIC0.7□□□□□ -2.3
HOXA13P31271 MIR573-201ENST00000384964 99 ntBASIC0.7□□□□□ -2.3
HOXA13P31271 RNU6-1006P-201ENST00000516998 103 ntBASIC0.7□□□□□ -2.3
HOXA13P31271 DEFB131E-201ENST00000532329 154 ntBASIC0.7□□□□□ -2.3
HOXA13P31271 MIR3613-201ENST00000579844 87 ntBASIC0.7□□□□□ -2.3
HOXA13P31271 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.7□□□□□ -2.3
HOXA13P31271 RNU6-363P-201ENST00000362895 105 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNA5SP499-201ENST00000363982 119 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-865P-201ENST00000364772 107 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 Y_RNA.291-201ENST00000364886 113 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 U8.6-201ENST00000364939 135 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-880P-201ENST00000384526 107 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-291P-201ENST00000384720 107 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 MIR548I2-201ENST00000408348 149 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-447P-201ENST00000410293 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-1118P-201ENST00000410382 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-1076P-201ENST00000410397 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-355P-201ENST00000410427 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-791P-201ENST00000410467 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-705P-201ENST00000410601 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 SNORA19.1-201ENST00000410656 129 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-1100P-201ENST00000410691 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-860P-201ENST00000410860 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-1217P-201ENST00000411276 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 RNU6-785P-201ENST00000411324 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 BX276092.1-201ENST00000427368 251 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 MIR4679-2-201ENST00000578358 77 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 U6.90-201ENST00000614007 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 U6.70-201ENST00000620287 104 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 MIR6513-201ENST00000621188 64 ntBASIC0.69□□□□□ -2.3
HOXA13P31271 Y_RNA.85-201ENST00000363014 111 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 Y_RNA.155-201ENST00000363632 101 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 RNA5SP245-201ENST00000364239 121 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 Y_RNA.360-201ENST00000365512 102 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 MIR577-201ENST00000385196 96 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 AC098934.3-201ENST00000430450 190 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 RNU6-589P-201ENST00000516485 107 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.68□□□□□ -2.3
HOXA13P31271 MIR3612-201ENST00000579753 87 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 AP001362.1-201ENST00000625165 124 ntBASIC0.68□□□□□ -2.3
HOXA13P31271 RNU6-1313P-201ENST00000362622 102 ntBASIC0.67□□□□□ -2.3
HOXA13P31271 Y_RNA.281-201ENST00000364774 94 ntBASIC0.67□□□□□ -2.3
HOXA13P31271 RNU6-1201P-201ENST00000384227 107 ntBASIC0.67□□□□□ -2.3
HOXA13P31271 AC068339.1-201ENST00000526965 141 ntBASIC0.67□□□□□ -2.3
HOXA13P31271 MIR4500-201ENST00000579472 76 ntBASIC0.67□□□□□ -2.3
HOXA13P31271 uc_338.28-201ENST00000612082 187 ntBASIC0.67□□□□□ -2.3
HOXA13P31271 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.67□□□□□ -2.3
HOXA13P31271 RNU6-1107P-201ENST00000364817 104 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 RNU6-1056P-201ENST00000383996 107 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 RNU6-409P-201ENST00000384114 104 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 RPL39P34-201ENST00000477141 156 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 AC002350.1-201ENST00000490759 375 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 SNORA31.14-201ENST00000516728 116 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 Y_RNA.697-201ENST00000516776 113 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 RNU6-765P-201ENST00000516916 99 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 RNU6-448P-201ENST00000517052 107 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 AC091304.10-201ENST00000641554 121 ntBASIC0.66□□□□□ -2.3
HOXA13P31271 Y_RNA.98-201ENST00000363109 102 ntBASIC0.65□□□□□ -2.31
HOXA13P31271 RNU4-58P-201ENST00000363192 141 ntBASIC0.65□□□□□ -2.31
HOXA13P31271 SNORD20-201ENST00000384550 80 ntBASIC0.65□□□□□ -2.31
HOXA13P31271 MIR644A-201ENST00000385262 94 ntBASIC0.65□□□□□ -2.31
HOXA13P31271 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
HOXA13P31271 RNU6-1194P-201ENST00000516208 104 ntBASIC0.65□□□□□ -2.31
HOXA13P31271 MIR5009-201ENST00000578736 100 ntBASIC0.65□□□□□ -2.31
HOXA13P31271 uc_338.16-201ENST00000621804 95 ntBASIC0.65□□□□□ -2.31
HOXA13P31271 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HOXA13P31271 Y_RNA.273-201ENST00000364703 102 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 RNU6-1325P-201ENST00000364905 105 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 RNU6-1014P-201ENST00000383940 103 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 Y_RNA.507-201ENST00000384500 99 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 RNU6-1081P-201ENST00000384537 107 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 Y_RNA.536-201ENST00000384621 113 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 RNU6-535P-201ENST00000384722 107 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.64□□□□□ -2.31
HOXA13P31271 AC092628.1-201ENST00000436250 252 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 AP003327.1-201ENST00000529684 127 ntBASIC0.64□□□□□ -2.31
HOXA13P31271 MIR548Z-201ENST00000584743 97 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 191.4 ms