Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PDCD5P2-201ENST00000507570 312 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-351P-201ENST00000516097 100 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNA5SP220-201ENST00000516298 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-977P-201ENST00000516411 103 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-531P-201ENST00000516694 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-1006P-201ENST00000516998 103 ntBASIC0.73□□□□□ -2.29
SHC1P29353 AC008608.1-201ENST00000603910 127 ntBASIC0.73□□□□□ -2.29
SHC1P29353 uc_338.28-201ENST00000612082 187 ntBASIC0.73□□□□□ -2.29
SHC1P29353 U6.90-201ENST00000614007 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 MIR8066-201ENST00000617280 78 ntBASIC0.73□□□□□ -2.29
SHC1P29353 MIR6788-201ENST00000618842 66 ntBASIC0.73□□□□□ -2.29
SHC1P29353 U6.70-201ENST00000620287 104 ntBASIC0.73□□□□□ -2.29
SHC1P29353 AL512310.12-203ENST00000640543 90 ntBASIC0.73□□□□□ -2.29
SHC1P29353 RNU6-1313P-201ENST00000362622 102 ntBASIC0.72□□□□□ -2.29
SHC1P29353 Y_RNA.81-201ENST00000362997 102 ntBASIC0.72□□□□□ -2.29
SHC1P29353 RNU6-755P-201ENST00000364400 103 ntBASIC0.72□□□□□ -2.29
SHC1P29353 RNU6-865P-201ENST00000364772 107 ntBASIC0.72□□□□□ -2.29
SHC1P29353 RNU6-1335P-201ENST00000365426 107 ntBASIC0.72□□□□□ -2.29
SHC1P29353 RNU6-1201P-201ENST00000384227 107 ntBASIC0.72□□□□□ -2.29
SHC1P29353 Y_RNA.508-201ENST00000384502 114 ntBASIC0.72□□□□□ -2.29
SHC1P29353 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
SHC1P29353 RNU7-102P-201ENST00000458948 62 ntBASIC0.72□□□□□ -2.29
SHC1P29353 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SHC1P29353 Y_RNA.42-201ENST00000362660 108 ntBASIC0.71□□□□□ -2.3
SHC1P29353 Y_RNA.163-201ENST00000363702 113 ntBASIC0.71□□□□□ -2.3
SHC1P29353 RNU6-42P-201ENST00000384165 107 ntBASIC0.71□□□□□ -2.3
SHC1P29353 MIR520F-201ENST00000384824 87 ntBASIC0.71□□□□□ -2.3
SHC1P29353 MIR938-201ENST00000401216 83 ntBASIC0.71□□□□□ -2.3
SHC1P29353 MIR548J-201ENST00000408833 112 ntBASIC0.71□□□□□ -2.3
SHC1P29353 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
SHC1P29353 RNU6-1110P-201ENST00000516462 101 ntBASIC0.71□□□□□ -2.3
SHC1P29353 MIR4694-201ENST00000578534 80 ntBASIC0.71□□□□□ -2.3
SHC1P29353 MIR4500-201ENST00000579472 76 ntBASIC0.71□□□□□ -2.3
SHC1P29353 SNORD92-201ENST00000585078 85 ntBASIC0.71□□□□□ -2.3
SHC1P29353 MIR6082-201ENST00000613604 109 ntBASIC0.71□□□□□ -2.3
SHC1P29353 AL442128.1-201ENST00000615151 90 ntBASIC0.71□□□□□ -2.3
SHC1P29353 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
SHC1P29353 AP001362.1-201ENST00000625165 124 ntBASIC0.71□□□□□ -2.3
SHC1P29353 MIR450A1-201ENST00000362262 91 ntBASIC0.7□□□□□ -2.3
SHC1P29353 RNY3P2-201ENST00000362918 102 ntBASIC0.7□□□□□ -2.3
SHC1P29353 RNU6-832P-201ENST00000363319 107 ntBASIC0.7□□□□□ -2.3
SHC1P29353 RNU6-364P-201ENST00000384387 107 ntBASIC0.7□□□□□ -2.3
SHC1P29353 SNORA72.6-201ENST00000384520 129 ntBASIC0.7□□□□□ -2.3
SHC1P29353 FABP5P4-201ENST00000437203 171 ntBASIC0.7□□□□□ -2.3
SHC1P29353 AC067940.1-201ENST00000458411 300 ntBASIC0.7□□□□□ -2.3
SHC1P29353 AC090897.1-201ENST00000580909 226 ntBASIC0.7□□□□□ -2.3
SHC1P29353 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
SHC1P29353 MIR6734-201ENST00000621166 68 ntBASIC0.7□□□□□ -2.3
SHC1P29353 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.7□□□□□ -2.3
SHC1P29353 RNU6-147P-201ENST00000383983 107 ntBASIC0.69□□□□□ -2.3
SHC1P29353 MIR590-201ENST00000385008 97 ntBASIC0.69□□□□□ -2.3
SHC1P29353 MIR1302-5-201ENST00000408164 150 ntBASIC0.69□□□□□ -2.3
SHC1P29353 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
SHC1P29353 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.69□□□□□ -2.3
SHC1P29353 RNU6-904P-201ENST00000516206 101 ntBASIC0.69□□□□□ -2.3
SHC1P29353 RNA5SP255-201ENST00000516370 107 ntBASIC0.69□□□□□ -2.3
SHC1P29353 RNU6-537P-201ENST00000517277 103 ntBASIC0.69□□□□□ -2.3
SHC1P29353 DEFB131E-201ENST00000532329 154 ntBASIC0.69□□□□□ -2.3
SHC1P29353 AC141557.1-201ENST00000540982 400 ntBASIC0.69□□□□□ -2.3
SHC1P29353 AC091304.10-201ENST00000641554 121 ntBASIC0.69□□□□□ -2.3
SHC1P29353 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
SHC1P29353 Y_RNA.377-201ENST00000365644 108 ntBASIC0.68□□□□□ -2.3
SHC1P29353 RNU6-756P-201ENST00000383997 107 ntBASIC0.68□□□□□ -2.3
SHC1P29353 SNORA51.5-201ENST00000384126 131 ntBASIC0.68□□□□□ -2.3
SHC1P29353 MIR520H-201ENST00000385126 88 ntBASIC0.68□□□□□ -2.3
SHC1P29353 BX276092.1-201ENST00000427368 251 ntBASIC0.68□□□□□ -2.3
SHC1P29353 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
SHC1P29353 RNU6-109P-201ENST00000516364 107 ntBASIC0.68□□□□□ -2.3
SHC1P29353 RNU6-184P-201ENST00000516514 107 ntBASIC0.68□□□□□ -2.3
SHC1P29353 RNU6-1223P-201ENST00000517124 104 ntBASIC0.68□□□□□ -2.3
SHC1P29353 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
SHC1P29353 Y_RNA.78-201ENST00000362970 110 ntBASIC0.67□□□□□ -2.3
SHC1P29353 RNU4-58P-201ENST00000363192 141 ntBASIC0.67□□□□□ -2.3
SHC1P29353 SNORD38.1-201ENST00000363863 68 ntBASIC0.67□□□□□ -2.3
SHC1P29353 RNU6-153P-201ENST00000364422 104 ntBASIC0.67□□□□□ -2.3
SHC1P29353 SNORD105-201ENST00000386910 85 ntBASIC0.67□□□□□ -2.3
SHC1P29353 RNU1-119P-201ENST00000391122 165 ntBASIC0.67□□□□□ -2.3
SHC1P29353 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.67□□□□□ -2.3
SHC1P29353 snoU13.18-201ENST00000459483 104 ntBASIC0.67□□□□□ -2.3
SHC1P29353 MIR548Z-201ENST00000584743 97 ntBASIC0.67□□□□□ -2.3
SHC1P29353 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
SHC1P29353 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.67□□□□□ -2.3
SHC1P29353 RNU6-1163P-201ENST00000364516 107 ntBASIC0.66□□□□□ -2.3
SHC1P29353 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
SHC1P29353 MIR548G-201ENST00000408442 89 ntBASIC0.66□□□□□ -2.3
SHC1P29353 Y_RNA.601-201ENST00000410500 113 ntBASIC0.66□□□□□ -2.3
SHC1P29353 AC004941.2-201ENST00000427009 228 ntBASIC0.66□□□□□ -2.3
SHC1P29353 SPINT5P-201ENST00000448174 155 ntBASIC0.66□□□□□ -2.3
SHC1P29353 AL031737.1-201ENST00000450125 223 ntBASIC0.66□□□□□ -2.3
SHC1P29353 RNU6-795P-201ENST00000516323 103 ntBASIC0.66□□□□□ -2.3
SHC1P29353 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.66□□□□□ -2.3
SHC1P29353 RNU6-90P-201ENST00000606352 106 ntBASIC0.66□□□□□ -2.3
SHC1P29353 AC012531.4-201ENST00000616509 177 ntBASIC0.66□□□□□ -2.3
SHC1P29353 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
SHC1P29353 RNU6-766P-201ENST00000362478 107 ntBASIC0.65□□□□□ -2.31
SHC1P29353 Y_RNA.173-201ENST00000363776 113 ntBASIC0.65□□□□□ -2.31
SHC1P29353 RNA5SP245-201ENST00000364239 121 ntBASIC0.65□□□□□ -2.31
SHC1P29353 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SHC1P29353 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
SHC1P29353 AC109327.2-201ENST00000448339 378 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 278.4 ms