Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC083904.1-201ENST00000487828 231 ntBASIC-3.32□□□□□ -2.94
HMGA1P17096 RNA5SP401-201ENST00000515920 127 ntBASIC-3.32□□□□□ -2.94
HMGA1P17096 RNU6-719P-201ENST00000516671 104 ntBASIC-3.32□□□□□ -2.94
HMGA1P17096 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-3.32□□□□□ -2.94
HMGA1P17096 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.33□□□□□ -2.94
HMGA1P17096 RNU6-157P-201ENST00000383957 107 ntBASIC-3.33□□□□□ -2.94
HMGA1P17096 MTND2P31-201ENST00000512602 616 ntBASIC-3.33□□□□□ -2.94
HMGA1P17096 RNU6-1192P-201ENST00000612197 107 ntBASIC-3.33□□□□□ -2.94
HMGA1P17096 RNU6-489P-201ENST00000618289 107 ntBASIC-3.33□□□□□ -2.94
HMGA1P17096 MIR509-1-201ENST00000385265 94 ntBASIC-3.34□□□□□ -2.94
HMGA1P17096 MIR509-2-201ENST00000390724 91 ntBASIC-3.34□□□□□ -2.94
HMGA1P17096 RPS29P25-201ENST00000481709 171 ntBASIC-3.34□□□□□ -2.94
HMGA1P17096 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.34□□□□□ -2.94
HMGA1P17096 MIR5701-3-201ENST00000578890 82 ntBASIC-3.34□□□□□ -2.94
HMGA1P17096 MIR23C-201ENST00000579846 100 ntBASIC-3.34□□□□□ -2.94
HMGA1P17096 MIR5701-1-201ENST00000585138 82 ntBASIC-3.34□□□□□ -2.94
HMGA1P17096 MIR5701-2-201ENST00000615634 82 ntBASIC-3.34□□□□□ -2.94
HMGA1P17096 MIR367-201ENST00000362299 68 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 RNU6-596P-201ENST00000365395 98 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 RNU6-144P-201ENST00000383951 107 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 RNU6-38P-201ENST00000384085 107 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 AL033528.1-201ENST00000453780 140 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 MIR2355-201ENST00000517199 87 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 RN7SKP295-201ENST00000517264 153 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 RNA5SP106-201ENST00000517274 100 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 AP000240.1-201ENST00000609910 452 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-3.35□□□□□ -2.95
HMGA1P17096 AC006927.3-201ENST00000638789 384 ntBASIC-3.35□□□□□ -2.95
HMGA1P17096 SNORD36A-201ENST00000362874 73 ntBASIC-3.36□□□□□ -2.95
HMGA1P17096 Y_RNA.521-201ENST00000384560 114 ntBASIC-3.36□□□□□ -2.95
HMGA1P17096 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.36□□□□□ -2.95
HMGA1P17096 Y_RNA.618-201ENST00000410949 107 ntBASIC-3.36□□□□□ -2.95
HMGA1P17096 MTND1P2-201ENST00000430604 821 ntBASIC-3.36□□□□□ -2.95
HMGA1P17096 AL009048.1-201ENST00000450437 298 ntBASIC-3.36□□□□□ -2.95
HMGA1P17096 RNU2-4P-201ENST00000606190 192 ntBASIC-3.36□□□□□ -2.95
HMGA1P17096 RNU6-254P-201ENST00000363377 107 ntBASIC-3.37□□□□□ -2.95
HMGA1P17096 RNU6-1228P-201ENST00000391014 107 ntBASIC-3.37□□□□□ -2.95
HMGA1P17096 U7.5-201ENST00000517224 61 ntBASIC-3.37□□□□□ -2.95
HMGA1P17096 AL512360.1-201ENST00000555346 234 ntBASIC-3.37□□□□□ -2.95
HMGA1P17096 RNU6-1120P-201ENST00000362988 108 ntBASIC-3.38□□□□□ -2.95
HMGA1P17096 RNU6-1242P-201ENST00000391052 103 ntBASIC-3.38□□□□□ -2.95
HMGA1P17096 HSPE1P25-201ENST00000455484 251 ntBASIC-3.38□□□□□ -2.95
HMGA1P17096 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-3.38□□□□□ -2.95
HMGA1P17096 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.38□□□□□ -2.95
HMGA1P17096 RNU6-824P-201ENST00000363724 104 ntBASIC-3.39□□□□□ -2.95
HMGA1P17096 U3.27-201ENST00000391237 200 ntBASIC-3.39□□□□□ -2.95
HMGA1P17096 FGF7P7-201ENST00000514120 227 ntBASIC-3.39□□□□□ -2.95
HMGA1P17096 RNU7-2P-201ENST00000516096 62 ntBASIC-3.39□□□□□ -2.95
HMGA1P17096 AC084782.3-201ENST00000612282 578 ntBASIC-3.39□□□□□ -2.95
HMGA1P17096 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.4□□□□□ -2.95
HMGA1P17096 RNU6-899P-201ENST00000363947 107 ntBASIC-3.4□□□□□ -2.95
HMGA1P17096 Y_RNA.230-201ENST00000364348 109 ntBASIC-3.4□□□□□ -2.95
HMGA1P17096 SNORA33.1-201ENST00000364957 130 ntBASIC-3.4□□□□□ -2.95
HMGA1P17096 RNU6-472P-201ENST00000384299 107 ntBASIC-3.4□□□□□ -2.95
HMGA1P17096 MTCO2P24-201ENST00000515611 426 ntBASIC-3.4□□□□□ -2.95
HMGA1P17096 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-3.4□□□□□ -2.95
HMGA1P17096 AC005014.2-201ENST00000607795 599 ntBASIC-3.4□□□□□ -2.95
HMGA1P17096 SNORD81.1-201ENST00000363064 77 ntBASIC-3.41□□□□□ -2.96
HMGA1P17096 Y_RNA.143-201ENST00000363520 106 ntBASIC-3.41□□□□□ -2.96
HMGA1P17096 RNY1P6-201ENST00000384193 109 ntBASIC-3.41□□□□□ -2.96
HMGA1P17096 RNY4P25-201ENST00000459254 96 ntBASIC-3.41□□□□□ -2.96
HMGA1P17096 RNU6-1281P-201ENST00000516223 105 ntBASIC-3.41□□□□□ -2.96
HMGA1P17096 AP002392.1-201ENST00000537692 208 ntBASIC-3.41□□□□□ -2.96
HMGA1P17096 Y_RNA.3-201ENST00000362331 103 ntBASIC-3.42□□□□□ -2.96
HMGA1P17096 Y_RNA.173-201ENST00000363776 113 ntBASIC-3.42□□□□□ -2.96
HMGA1P17096 Y_RNA.301-201ENST00000364990 103 ntBASIC-3.42□□□□□ -2.96
HMGA1P17096 Y_RNA.531-201ENST00000384589 121 ntBASIC-3.42□□□□□ -2.96
HMGA1P17096 Y_RNA.556-201ENST00000384677 113 ntBASIC-3.42□□□□□ -2.96
HMGA1P17096 RNU6-1299P-201ENST00000516316 100 ntBASIC-3.42□□□□□ -2.96
HMGA1P17096 RNU6-570P-201ENST00000517051 105 ntBASIC-3.42□□□□□ -2.96
HMGA1P17096 MRPS36P3-201ENST00000519284 130 ntBASIC-3.42□□□□□ -2.96
HMGA1P17096 Y_RNA.383-201ENST00000383855 97 ntBASIC-3.43□□□□□ -2.96
HMGA1P17096 MIR34C-201ENST00000384831 77 ntBASIC-3.43□□□□□ -2.96
HMGA1P17096 Y_RNA.633-201ENST00000459107 95 ntBASIC-3.43□□□□□ -2.96
HMGA1P17096 AC083798.1-201ENST00000472671 131 ntBASIC-3.43□□□□□ -2.96
HMGA1P17096 RNA5SP147-201ENST00000516493 109 ntBASIC-3.43□□□□□ -2.96
HMGA1P17096 SNORA18.6-201ENST00000516792 115 ntBASIC-3.43□□□□□ -2.96
HMGA1P17096 Y_RNA.159-201ENST00000363674 87 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 RNU6-842P-201ENST00000384269 107 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 Y_RNA.542-201ENST00000384641 111 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 MIR520D-201ENST00000385002 87 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 RNU6-861P-201ENST00000516745 106 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 Y_RNA.704-201ENST00000516851 102 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 CYP3A54P-201ENST00000566950 75 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 MIR4724-201ENST00000579485 89 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 MIR1244-1-201ENST00000612829 85 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 MIR1244-3-201ENST00000635744 85 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 MIR1244-2-201ENST00000636449 85 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 MIR1244-4-202ENST00000636813 85 ntBASIC-3.44□□□□□ -2.96
HMGA1P17096 RNU6-845P-201ENST00000362578 103 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 RNU4-68P-201ENST00000364314 141 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 RNU6-978P-201ENST00000364371 103 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 RNU1-115P-201ENST00000365329 160 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 Y_RNA.360-201ENST00000365512 102 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 RNU6-132P-201ENST00000383863 107 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 RNU6-1014P-201ENST00000383940 103 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 Y_RNA.441-201ENST00000384123 112 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 RNU6-246P-201ENST00000384702 107 ntBASIC-3.45□□□□□ -2.96
HMGA1P17096 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-3.45□□□□□ -2.96
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms