Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 Y_RNA.98-201ENST00000363109 102 ntBASIC0.11□□□□□ -2.39
KRT3P12035 Y_RNA.221-201ENST00000364248 96 ntBASIC0.11□□□□□ -2.39
KRT3P12035 RNU6-865P-201ENST00000364772 107 ntBASIC0.11□□□□□ -2.39
KRT3P12035 RNU6-449P-201ENST00000383914 107 ntBASIC0.11□□□□□ -2.39
KRT3P12035 SNORD116-18-201ENST00000383961 92 ntBASIC0.11□□□□□ -2.39
KRT3P12035 RNU6-1104P-201ENST00000384723 104 ntBASIC0.11□□□□□ -2.39
KRT3P12035 PCNPP3-201ENST00000393579 471 ntBASIC0.11□□□□□ -2.39
KRT3P12035 MIR513C-201ENST00000401352 84 ntBASIC0.11□□□□□ -2.39
KRT3P12035 BX276092.1-201ENST00000427368 251 ntBASIC0.11□□□□□ -2.39
KRT3P12035 MIR1270-201ENST00000459320 83 ntBASIC0.11□□□□□ -2.39
KRT3P12035 RNU7-6P-201ENST00000516845 62 ntBASIC0.11□□□□□ -2.39
KRT3P12035 AC004792.1-201ENST00000614523 137 ntBASIC0.11□□□□□ -2.39
KRT3P12035 MIR6828-201ENST00000636181 60 ntBASIC0.11□□□□□ -2.39
KRT3P12035 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
KRT3P12035 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
KRT3P12035 Y_RNA.257-201ENST00000364596 102 ntBASIC0.1□□□□□ -2.39
KRT3P12035 RNU6-616P-201ENST00000384353 107 ntBASIC0.1□□□□□ -2.39
KRT3P12035 RNU7-10P-201ENST00000607194 63 ntBASIC0.1□□□□□ -2.39
KRT3P12035 MIR6718-201ENST00000616153 80 ntBASIC0.1□□□□□ -2.39
KRT3P12035 MIR2909-201ENST00000617113 69 ntBASIC0.1□□□□□ -2.39
KRT3P12035 MIR6755-201ENST00000619993 66 ntBASIC0.1□□□□□ -2.39
KRT3P12035 Y_RNA.68-201ENST00000362881 102 ntBASIC0.09□□□□□ -2.4
KRT3P12035 Y_RNA.280-201ENST00000364765 112 ntBASIC0.09□□□□□ -2.4
KRT3P12035 RNU6-915P-201ENST00000364943 103 ntBASIC0.09□□□□□ -2.4
KRT3P12035 Y_RNA.441-201ENST00000384123 112 ntBASIC0.09□□□□□ -2.4
KRT3P12035 MIR643-201ENST00000385267 97 ntBASIC0.09□□□□□ -2.4
KRT3P12035 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
KRT3P12035 RNU7-2P-201ENST00000516096 62 ntBASIC0.09□□□□□ -2.4
KRT3P12035 Y_RNA.692-201ENST00000516627 105 ntBASIC0.09□□□□□ -2.4
KRT3P12035 Y_RNA.778-201ENST00000620203 90 ntBASIC0.09□□□□□ -2.4
KRT3P12035 AC021753.1-201ENST00000635724 168 ntBASIC0.09□□□□□ -2.4
KRT3P12035 Y_RNA.294-201ENST00000364916 102 ntBASIC0.08□□□□□ -2.4
KRT3P12035 RNU6-1130P-201ENST00000365434 107 ntBASIC0.08□□□□□ -2.4
KRT3P12035 SNORA2A-201ENST00000383885 135 ntBASIC0.08□□□□□ -2.4
KRT3P12035 MT-TG-201ENST00000387429 68 ntBASIC0.08□□□□□ -2.4
KRT3P12035 RNU6-1135P-201ENST00000411083 103 ntBASIC0.08□□□□□ -2.4
KRT3P12035 Y_RNA.681-201ENST00000516445 113 ntBASIC0.08□□□□□ -2.4
KRT3P12035 MIR499B-201ENST00000636498 73 ntBASIC0.08□□□□□ -2.4
KRT3P12035 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
KRT3P12035 MIR759-201ENST00000390224 91 ntBASIC0.07□□□□□ -2.4
KRT3P12035 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.07□□□□□ -2.4
KRT3P12035 AC067863.3-201ENST00000624172 122 ntBASIC0.07□□□□□ -2.4
KRT3P12035 AP001362.1-201ENST00000625165 124 ntBASIC0.07□□□□□ -2.4
KRT3P12035 Y_RNA.178-201ENST00000363832 102 ntBASIC0.06□□□□□ -2.4
KRT3P12035 Y_RNA.328-201ENST00000365208 113 ntBASIC0.06□□□□□ -2.4
KRT3P12035 RNU6-1126P-201ENST00000384002 107 ntBASIC0.06□□□□□ -2.4
KRT3P12035 MIR599-201ENST00000385069 95 ntBASIC0.06□□□□□ -2.4
KRT3P12035 MIR1263-201ENST00000408324 86 ntBASIC0.06□□□□□ -2.4
KRT3P12035 RNU6-182P-201ENST00000516970 105 ntBASIC0.06□□□□□ -2.4
KRT3P12035 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
KRT3P12035 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
KRT3P12035 RNU6-1307P-201ENST00000391012 103 ntBASIC0.05□□□□□ -2.4
KRT3P12035 AC244505.6-201ENST00000452829 130 ntBASIC0.05□□□□□ -2.4
KRT3P12035 RPL39P34-201ENST00000477141 156 ntBASIC0.05□□□□□ -2.4
KRT3P12035 TRAJ51-201ENST00000504127 63 ntBASIC0.05□□□□□ -2.4
KRT3P12035 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
KRT3P12035 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
KRT3P12035 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
KRT3P12035 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
KRT3P12035 Y_RNA.700-201ENST00000516806 100 ntBASIC0.05□□□□□ -2.4
KRT3P12035 RNU7-161P-201ENST00000517289 62 ntBASIC0.05□□□□□ -2.4
KRT3P12035 AP001328.1-201ENST00000528550 176 ntBASIC0.05□□□□□ -2.4
KRT3P12035 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
KRT3P12035 SNORD115-35-201ENST00000365122 82 ntBASIC0.04□□□□□ -2.4
KRT3P12035 RNU6-804P-201ENST00000384286 107 ntBASIC0.04□□□□□ -2.4
KRT3P12035 AC108059.2-201ENST00000434626 151 ntBASIC0.04□□□□□ -2.4
KRT3P12035 RNU6-1232P-201ENST00000516299 86 ntBASIC0.04□□□□□ -2.4
KRT3P12035 RNA5SP285-201ENST00000516619 119 ntBASIC0.04□□□□□ -2.4
KRT3P12035 MIR3121-201ENST00000579680 77 ntBASIC0.04□□□□□ -2.4
KRT3P12035 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
KRT3P12035 SNORD114-5-201ENST00000362928 70 ntBASIC0.03□□□□□ -2.4
KRT3P12035 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
KRT3P12035 RNU6-726P-201ENST00000364680 107 ntBASIC0.03□□□□□ -2.4
KRT3P12035 Y_RNA.270-201ENST00000364693 104 ntBASIC0.03□□□□□ -2.4
KRT3P12035 RNA5SP128-201ENST00000365305 116 ntBASIC0.03□□□□□ -2.4
KRT3P12035 MIR610-201ENST00000385139 96 ntBASIC0.03□□□□□ -2.4
KRT3P12035 RNU6-127P-201ENST00000390897 107 ntBASIC0.03□□□□□ -2.4
KRT3P12035 snosnR66.1-201ENST00000391095 99 ntBASIC0.03□□□□□ -2.4
KRT3P12035 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
KRT3P12035 Y_RNA.114-201ENST00000363265 113 ntBASIC0.02□□□□□ -2.41
KRT3P12035 Y_RNA.433-201ENST00000384089 102 ntBASIC0.02□□□□□ -2.41
KRT3P12035 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
KRT3P12035 MIR329-2-201ENST00000385029 84 ntBASIC0.02□□□□□ -2.41
KRT3P12035 MIR376B-201ENST00000614515 100 ntBASIC0.02□□□□□ -2.41
KRT3P12035 Y_RNA.127-201ENST00000363386 109 ntBASIC0.01□□□□□ -2.41
KRT3P12035 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
KRT3P12035 Y_RNA.362-201ENST00000365518 110 ntBASIC0.01□□□□□ -2.41
KRT3P12035 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.01□□□□□ -2.41
KRT3P12035 RNU7-195P-201ENST00000458793 62 ntBASIC0.01□□□□□ -2.41
KRT3P12035 RNU6-521P-201ENST00000516663 105 ntBASIC0.01□□□□□ -2.41
KRT3P12035 MTND5P40-201ENST00000559945 246 ntBASIC0.01□□□□□ -2.41
KRT3P12035 MIR3163-201ENST00000581592 73 ntBASIC0.01□□□□□ -2.41
KRT3P12035 AC090425.1-201ENST00000610007 140 ntBASIC0.01□□□□□ -2.41
KRT3P12035 Y_RNA.150-201ENST00000363562 102 ntBASIC0□□□□□ -2.41
KRT3P12035 Y_RNA.213-201ENST00000364178 111 ntBASIC0□□□□□ -2.41
KRT3P12035 Y_RNA.398-201ENST00000383952 99 ntBASIC0□□□□□ -2.41
KRT3P12035 Y_RNA.785-201ENST00000384290 109 ntBASIC0□□□□□ -2.41
KRT3P12035 RNU6-35P-201ENST00000384530 107 ntBASIC0□□□□□ -2.41
KRT3P12035 SNORD63B-201ENST00000411005 70 ntBASIC0□□□□□ -2.41
KRT3P12035 RNU7-197P-201ENST00000458836 62 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 699 ms