Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
CHGAP10645 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHGAP10645 RNU6-1229P-201ENST00000364295 107 ntBASIC2.88□□□□□ -1.95
CHGAP10645 RNU6-321P-201ENST00000410912 106 ntBASIC2.88□□□□□ -1.95
CHGAP10645 FGF7P7-201ENST00000514120 227 ntBASIC2.88□□□□□ -1.95
CHGAP10645 SNORA18.5-201ENST00000516616 101 ntBASIC2.88□□□□□ -1.95
CHGAP10645 AC104996.3-201ENST00000590718 94 ntBASIC2.88□□□□□ -1.95
CHGAP10645 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHGAP10645 MIR6073-201ENST00000352083 89 ntBASIC2.87□□□□□ -1.95
CHGAP10645 MIR337-201ENST00000362281 93 ntBASIC2.87□□□□□ -1.95
CHGAP10645 SNORD113.3-201ENST00000364630 78 ntBASIC2.87□□□□□ -1.95
CHGAP10645 RNU6-686P-201ENST00000364839 107 ntBASIC2.87□□□□□ -1.95
CHGAP10645 SNORA25.9-201ENST00000365087 128 ntBASIC2.87□□□□□ -1.95
CHGAP10645 MIR519A1-201ENST00000385257 85 ntBASIC2.87□□□□□ -1.95
CHGAP10645 RNA5SP292-201ENST00000390974 118 ntBASIC2.87□□□□□ -1.95
CHGAP10645 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.87□□□□□ -1.95
CHGAP10645 AL512310.8-201ENST00000550183 120 ntBASIC2.87□□□□□ -1.95
CHGAP10645 MIR3198-2-201ENST00000577868 80 ntBASIC2.87□□□□□ -1.95
CHGAP10645 MIR3064-201ENST00000581130 66 ntBASIC2.87□□□□□ -1.95
CHGAP10645 Y_RNA.56-201ENST00000362798 112 ntBASIC2.86□□□□□ -1.95
CHGAP10645 Y_RNA.536-201ENST00000384621 113 ntBASIC2.86□□□□□ -1.95
CHGAP10645 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CHGAP10645 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CHGAP10645 RNA5SP233-201ENST00000459153 113 ntBASIC2.86□□□□□ -1.95
CHGAP10645 AC090255.1-201ENST00000495779 349 ntBASIC2.86□□□□□ -1.95
CHGAP10645 AC013244.2-201ENST00000603396 103 ntBASIC2.86□□□□□ -1.95
CHGAP10645 MIR6082-201ENST00000613604 109 ntBASIC2.86□□□□□ -1.95
CHGAP10645 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHGAP10645 MIRLET7A1-201ENST00000362295 80 ntBASIC2.85□□□□□ -1.95
CHGAP10645 RNA5SP182-201ENST00000516064 82 ntBASIC2.85□□□□□ -1.95
CHGAP10645 MIR5089-201ENST00000580047 84 ntBASIC2.85□□□□□ -1.95
CHGAP10645 RNU6-132P-201ENST00000383863 107 ntBASIC2.84□□□□□ -1.95
CHGAP10645 Y_RNA.491-201ENST00000384417 107 ntBASIC2.84□□□□□ -1.95
CHGAP10645 TRAJ51-201ENST00000504127 63 ntBASIC2.84□□□□□ -1.95
CHGAP10645 RNU6-765P-201ENST00000516916 99 ntBASIC2.84□□□□□ -1.95
CHGAP10645 MIR5002-201ENST00000584713 97 ntBASIC2.84□□□□□ -1.95
CHGAP10645 AL161722.3-201ENST00000605789 2983 ntBASIC2.84□□□□□ -1.96
CHGAP10645 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CHGAP10645 MIR378A-201ENST00000362177 66 ntBASIC2.82□□□□□ -1.96
CHGAP10645 MIRLET7G-201ENST00000362280 84 ntBASIC2.82□□□□□ -1.96
CHGAP10645 Y_RNA.13-201ENST00000362403 112 ntBASIC2.82□□□□□ -1.96
CHGAP10645 RNU6-957P-201ENST00000363652 99 ntBASIC2.82□□□□□ -1.96
CHGAP10645 RNU6-934P-201ENST00000365154 107 ntBASIC2.82□□□□□ -1.96
CHGAP10645 MIR518E-201ENST00000385252 88 ntBASIC2.82□□□□□ -1.96
CHGAP10645 AL356379.1-201ENST00000414105 126 ntBASIC2.82□□□□□ -1.96
CHGAP10645 snoU13.21-201ENST00000459368 105 ntBASIC2.82□□□□□ -1.96
CHGAP10645 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.82□□□□□ -1.96
CHGAP10645 Y_RNA.330-201ENST00000365230 109 ntBASIC2.81□□□□□ -1.96
CHGAP10645 SNORD83.1-201ENST00000411362 77 ntBASIC2.81□□□□□ -1.96
CHGAP10645 RNA5SP402-201ENST00000517148 110 ntBASIC2.81□□□□□ -1.96
CHGAP10645 AL137847.3-201ENST00000611521 109 ntBASIC2.81□□□□□ -1.96
CHGAP10645 MIR8081-201ENST00000611533 95 ntBASIC2.81□□□□□ -1.96
CHGAP10645 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.81□□□□□ -1.96
CHGAP10645 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.81□□□□□ -1.96
CHGAP10645 ZNF355P-201ENST00000427301 3216 ntBASIC2.8□□□□□ -1.96
CHGAP10645 Y_RNA.545-201ENST00000384652 105 ntBASIC2.8□□□□□ -1.96
CHGAP10645 RNU1-78P-201ENST00000391248 165 ntBASIC2.8□□□□□ -1.96
CHGAP10645 RNU7-195P-201ENST00000458793 62 ntBASIC2.8□□□□□ -1.96
CHGAP10645 AC036111.3-201ENST00000526389 112 ntBASIC2.8□□□□□ -1.96
CHGAP10645 AL049779.4-201ENST00000604500 156 ntBASIC2.8□□□□□ -1.96
CHGAP10645 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHGAP10645 RNU6-1260P-201ENST00000362944 107 ntBASIC2.79□□□□□ -1.96
CHGAP10645 RNU6-161P-201ENST00000363051 106 ntBASIC2.79□□□□□ -1.96
CHGAP10645 Y_RNA.565-201ENST00000384719 101 ntBASIC2.79□□□□□ -1.96
CHGAP10645 SNORD13-201ENST00000459299 104 ntBASIC2.79□□□□□ -1.96
CHGAP10645 AC048334.1-201ENST00000477975 159 ntBASIC2.79□□□□□ -1.96
CHGAP10645 AC139453.2-201ENST00000487255 133 ntBASIC2.79□□□□□ -1.96
CHGAP10645 Y_RNA.809-201ENST00000516058 95 ntBASIC2.79□□□□□ -1.96
CHGAP10645 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHGAP10645 Y_RNA.264-201ENST00000364665 102 ntBASIC2.78□□□□□ -1.96
CHGAP10645 MIR125B2-201ENST00000385128 89 ntBASIC2.78□□□□□ -1.96
CHGAP10645 AC092628.1-201ENST00000436250 252 ntBASIC2.78□□□□□ -1.96
CHGAP10645 MIR6895-201ENST00000613497 78 ntBASIC2.78□□□□□ -1.96
CHGAP10645 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.78□□□□□ -1.96
CHGAP10645 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CHGAP10645 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CHGAP10645 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CHGAP10645 MIRLET7F1-201ENST00000362202 87 ntBASIC2.77□□□□□ -1.97
CHGAP10645 RNA5SP190-201ENST00000365222 118 ntBASIC2.77□□□□□ -1.97
CHGAP10645 SNORD111-201ENST00000408139 94 ntBASIC2.77□□□□□ -1.97
CHGAP10645 HMGN2P19-201ENST00000425149 265 ntBASIC2.77□□□□□ -1.97
CHGAP10645 AC104435.1-201ENST00000483483 166 ntBASIC2.77□□□□□ -1.97
CHGAP10645 SNORA25.15-201ENST00000516487 89 ntBASIC2.77□□□□□ -1.97
CHGAP10645 RN7SKP88-201ENST00000516847 250 ntBASIC2.77□□□□□ -1.97
CHGAP10645 MIR4422-201ENST00000581938 83 ntBASIC2.77□□□□□ -1.97
CHGAP10645 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.77□□□□□ -1.97
CHGAP10645 7SK.8-201ENST00000612110 250 ntBASIC2.77□□□□□ -1.97
CHGAP10645 7SK.11-201ENST00000615477 250 ntBASIC2.77□□□□□ -1.97
CHGAP10645 7SK.13-201ENST00000622040 250 ntBASIC2.77□□□□□ -1.97
CHGAP10645 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.77□□□□□ -1.97
CHGAP10645 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CHGAP10645 SNORD77.2-201ENST00000391045 68 ntBASIC2.76□□□□□ -1.97
CHGAP10645 RNU6-1108P-201ENST00000516308 104 ntBASIC2.76□□□□□ -1.97
CHGAP10645 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.76□□□□□ -1.97
CHGAP10645 RNA5SP160-201ENST00000364866 120 ntBASIC2.75□□□□□ -1.97
CHGAP10645 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHGAP10645 TRMT112P2-201ENST00000512910 132 ntBASIC2.75□□□□□ -1.97
CHGAP10645 MIR4771-2-201ENST00000577758 74 ntBASIC2.75□□□□□ -1.97
CHGAP10645 MIR4771-1-201ENST00000582617 74 ntBASIC2.75□□□□□ -1.97
CHGAP10645 AC084768.2-201ENST00000622736 221 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 267.5 ms