Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL121914.1-201ENST00000450188 156 ntBASIC-1.96□□□□□ -2.72
TPM1P09493 SNORD2.1-201ENST00000458762 69 ntBASIC-1.96□□□□□ -2.72
TPM1P09493 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.96□□□□□ -2.72
TPM1P09493 MIR1302-1-201ENST00000637932 143 ntBASIC-1.96□□□□□ -2.72
TPM1P09493 AC073869.6-201ENST00000640656 341 ntBASIC-1.96□□□□□ -2.72
TPM1P09493 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.97□□□□□ -2.72
TPM1P09493 RNU6-103P-201ENST00000363686 107 ntBASIC-1.97□□□□□ -2.72
TPM1P09493 SNORD74.6-201ENST00000364796 70 ntBASIC-1.97□□□□□ -2.72
TPM1P09493 MIR1265-201ENST00000408444 86 ntBASIC-1.97□□□□□ -2.72
TPM1P09493 MTATP6P23-201ENST00000440153 476 ntBASIC-1.97□□□□□ -2.72
TPM1P09493 RNA5SP236-201ENST00000516169 116 ntBASIC-1.97□□□□□ -2.72
TPM1P09493 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.97□□□□□ -2.72
TPM1P09493 TRDV1-202ENST00000621643 102 ntBASIC-1.97□□□□□ -2.72
TPM1P09493 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.98□□□□□ -2.73
TPM1P09493 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.98□□□□□ -2.73
TPM1P09493 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.98□□□□□ -2.73
TPM1P09493 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.98□□□□□ -2.73
TPM1P09493 FGF7P6-202ENST00000451282 293 ntBASIC-1.98□□□□□ -2.73
TPM1P09493 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.98□□□□□ -2.73
TPM1P09493 MIR1252-201ENST00000408861 65 ntBASIC-1.99□□□□□ -2.73
TPM1P09493 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.99□□□□□ -2.73
TPM1P09493 SNORD19B-201ENST00000459623 84 ntBASIC-1.99□□□□□ -2.73
TPM1P09493 SNORA40.15-201ENST00000516884 107 ntBASIC-1.99□□□□□ -2.73
TPM1P09493 MIR6854-201ENST00000614935 69 ntBASIC-1.99□□□□□ -2.73
TPM1P09493 U6.100-201ENST00000636230 99 ntBASIC-1.99□□□□□ -2.73
TPM1P09493 Y_RNA.52-201ENST00000362760 96 ntBASIC-2□□□□□ -2.73
TPM1P09493 SNORD115-35-201ENST00000365122 82 ntBASIC-2□□□□□ -2.73
TPM1P09493 RNU4-17P-201ENST00000365598 141 ntBASIC-2□□□□□ -2.73
TPM1P09493 RNU7-164P-201ENST00000459221 62 ntBASIC-2□□□□□ -2.73
TPM1P09493 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2□□□□□ -2.73
TPM1P09493 AC021443.1-201ENST00000604478 211 ntBASIC-2□□□□□ -2.73
TPM1P09493 RNU6-431P-201ENST00000383874 107 ntBASIC-2.01□□□□□ -2.73
TPM1P09493 SNORD64-201ENST00000386683 67 ntBASIC-2.01□□□□□ -2.73
TPM1P09493 AC138907.4-201ENST00000570107 226 ntBASIC-2.01□□□□□ -2.73
TPM1P09493 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.02□□□□□ -2.73
TPM1P09493 Y_RNA.437-201ENST00000384113 113 ntBASIC-2.02□□□□□ -2.73
TPM1P09493 MIR216B-201ENST00000390186 82 ntBASIC-2.02□□□□□ -2.73
TPM1P09493 RNU6-823P-201ENST00000391042 103 ntBASIC-2.02□□□□□ -2.73
TPM1P09493 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.02□□□□□ -2.73
TPM1P09493 Z83846.1-201ENST00000446798 265 ntBASIC-2.02□□□□□ -2.73
TPM1P09493 SCARNA18B-201ENST00000458806 135 ntBASIC-2.02□□□□□ -2.73
TPM1P09493 AL365265.1-201ENST00000621045 234 ntBASIC-2.02□□□□□ -2.73
TPM1P09493 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 RNU6-476P-201ENST00000384726 107 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 RNU7-123P-201ENST00000515911 60 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 RNU6-240P-201ENST00000516098 97 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 MIR8068-201ENST00000618032 68 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.03□□□□□ -2.73
TPM1P09493 RNU6-770P-201ENST00000363929 105 ntBASIC-2.04□□□□□ -2.74
TPM1P09493 SNORD27-201ENST00000363981 72 ntBASIC-2.04□□□□□ -2.74
TPM1P09493 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.04□□□□□ -2.74
TPM1P09493 AL589823.1-201ENST00000429577 183 ntBASIC-2.04□□□□□ -2.74
TPM1P09493 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.04□□□□□ -2.74
TPM1P09493 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.05□□□□□ -2.74
TPM1P09493 MIR147A-201ENST00000385079 72 ntBASIC-2.05□□□□□ -2.74
TPM1P09493 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.05□□□□□ -2.74
TPM1P09493 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.05□□□□□ -2.74
TPM1P09493 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.05□□□□□ -2.74
TPM1P09493 MIR378F-201ENST00000578143 78 ntBASIC-2.05□□□□□ -2.74
TPM1P09493 MIR4744-201ENST00000581563 82 ntBASIC-2.05□□□□□ -2.74
TPM1P09493 MTRNR2L2-201ENST00000604882 87 ntBASIC-2.05□□□□□ -2.74
TPM1P09493 MIR548O2-201ENST00000616090 70 ntBASIC-2.05□□□□□ -2.74
TPM1P09493 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.05□□□□□ -2.74
TPM1P09493 Y_RNA.142-201ENST00000363491 102 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 RNU6-450P-201ENST00000364654 107 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 RNU6-616P-201ENST00000384353 107 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 RNU6-35P-201ENST00000384530 107 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 RNU6-243P-201ENST00000391140 107 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-2.06□□□□□ -2.74
TPM1P09493 MIR548AX-201ENST00000580117 73 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 AL132765.2-201ENST00000610812 351 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 MIR382-201ENST00000637119 76 ntBASIC-2.06□□□□□ -2.74
TPM1P09493 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 Y_RNA.68-201ENST00000362881 102 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 MIR34C-201ENST00000384831 77 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 RNU6-651P-201ENST00000411040 105 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 ELOCP20-201ENST00000422460 345 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 AL161932.1-201ENST00000437408 146 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 AL442663.2-201ENST00000554385 511 ntBASIC-2.07□□□□□ -2.74
TPM1P09493 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.08□□□□□ -2.74
TPM1P09493 SNORD38.2-201ENST00000384470 69 ntBASIC-2.08□□□□□ -2.74
TPM1P09493 Y_RNA.556-201ENST00000384677 113 ntBASIC-2.08□□□□□ -2.74
TPM1P09493 RNU6-101P-201ENST00000410323 104 ntBASIC-2.08□□□□□ -2.74
TPM1P09493 RNY3P15-201ENST00000516297 97 ntBASIC-2.08□□□□□ -2.74
TPM1P09493 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.09□□□□□ -2.74
TPM1P09493 Y_RNA.283-201ENST00000364798 112 ntBASIC-2.09□□□□□ -2.74
TPM1P09493 AC138393.2-201ENST00000414742 246 ntBASIC-2.09□□□□□ -2.74
TPM1P09493 RNA5SP470-201ENST00000516463 106 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms