Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNU7-159P-201ENST00000459284 62 ntBASIC-0.33□□□□□ -2.46
HMGB1P09429 AP001362.1-201ENST00000625165 124 ntBASIC-0.33□□□□□ -2.46
HMGB1P09429 AC073869.9-201ENST00000641610 120 ntBASIC-0.33□□□□□ -2.46
HMGB1P09429 RNU6-574P-201ENST00000384265 107 ntBASIC-0.34□□□□□ -2.46
HMGB1P09429 RNU6-929P-201ENST00000384429 107 ntBASIC-0.34□□□□□ -2.46
HMGB1P09429 RNU7-2P-201ENST00000516096 62 ntBASIC-0.34□□□□□ -2.46
HMGB1P09429 MIR1295B-201ENST00000636144 60 ntBASIC-0.34□□□□□ -2.46
HMGB1P09429 AC097635.1-201ENST00000450678 155 ntBASIC-0.35□□□□□ -2.47
HMGB1P09429 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.35□□□□□ -2.47
HMGB1P09429 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.35□□□□□ -2.47
HMGB1P09429 AL137067.1-201ENST00000615933 120 ntBASIC-0.35□□□□□ -2.47
HMGB1P09429 SNORD41.1-201ENST00000391000 69 ntBASIC-0.36□□□□□ -2.47
HMGB1P09429 MIR548H2-201ENST00000408874 88 ntBASIC-0.36□□□□□ -2.47
HMGB1P09429 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.36□□□□□ -2.47
HMGB1P09429 RNY4P20-201ENST00000516678 93 ntBASIC-0.36□□□□□ -2.47
HMGB1P09429 RNY1P11-201ENST00000363759 113 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 RNU4-84P-201ENST00000364200 139 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 RNA5SP163-201ENST00000410304 99 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 MIR548AD-201ENST00000584780 82 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 AC072026.1-201ENST00000605023 201 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 MIR2909-201ENST00000617113 69 ntBASIC-0.37□□□□□ -2.47
HMGB1P09429 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.38□□□□□ -2.47
HMGB1P09429 RNU6-616P-201ENST00000384353 107 ntBASIC-0.38□□□□□ -2.47
HMGB1P09429 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.38□□□□□ -2.47
HMGB1P09429 AL603914.1-201ENST00000401964 204 ntBASIC-0.38□□□□□ -2.47
HMGB1P09429 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.38□□□□□ -2.47
HMGB1P09429 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.38□□□□□ -2.47
HMGB1P09429 MIR548I2-201ENST00000408348 149 ntBASIC-0.39□□□□□ -2.47
HMGB1P09429 AC006210.1-201ENST00000424882 111 ntBASIC-0.39□□□□□ -2.47
HMGB1P09429 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.4□□□□□ -2.47
HMGB1P09429 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.4□□□□□ -2.47
HMGB1P09429 RNU6-756P-201ENST00000383997 107 ntBASIC-0.4□□□□□ -2.47
HMGB1P09429 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.4□□□□□ -2.47
HMGB1P09429 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.4□□□□□ -2.47
HMGB1P09429 AC104692.1-201ENST00000472406 90 ntBASIC-0.4□□□□□ -2.47
HMGB1P09429 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.4□□□□□ -2.47
HMGB1P09429 SNORD110-201ENST00000408189 75 ntBASIC-0.41□□□□□ -2.48
HMGB1P09429 RNU7-195P-201ENST00000458793 62 ntBASIC-0.41□□□□□ -2.48
HMGB1P09429 RNU7-121P-201ENST00000516604 62 ntBASIC-0.41□□□□□ -2.48
HMGB1P09429 AP002392.1-201ENST00000537692 208 ntBASIC-0.41□□□□□ -2.48
HMGB1P09429 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.41□□□□□ -2.48
HMGB1P09429 SNORD63B-201ENST00000411005 70 ntBASIC-0.42□□□□□ -2.48
HMGB1P09429 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.42□□□□□ -2.48
HMGB1P09429 NAMPTP3-201ENST00000569273 224 ntBASIC-0.42□□□□□ -2.48
HMGB1P09429 SNORD115-35-201ENST00000365122 82 ntBASIC-0.43□□□□□ -2.48
HMGB1P09429 MIR214-201ENST00000385214 110 ntBASIC-0.43□□□□□ -2.48
HMGB1P09429 RNA5SP480-201ENST00000516840 109 ntBASIC-0.43□□□□□ -2.48
HMGB1P09429 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.43□□□□□ -2.48
HMGB1P09429 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.43□□□□□ -2.48
HMGB1P09429 MIR4677-201ENST00000584153 80 ntBASIC-0.43□□□□□ -2.48
HMGB1P09429 AC108081.1-201ENST00000604358 221 ntBASIC-0.43□□□□□ -2.48
HMGB1P09429 uc_338.28-201ENST00000612082 187 ntBASIC-0.43□□□□□ -2.48
HMGB1P09429 MIR376B-201ENST00000614515 100 ntBASIC-0.43□□□□□ -2.48
HMGB1P09429 RNU6-509P-201ENST00000363519 107 ntBASIC-0.44□□□□□ -2.48
HMGB1P09429 SNORD4A-201ENST00000459174 72 ntBASIC-0.45□□□□□ -2.48
HMGB1P09429 RNU7-13P-201ENST00000516413 62 ntBASIC-0.45□□□□□ -2.48
HMGB1P09429 RNU7-6P-201ENST00000516845 62 ntBASIC-0.45□□□□□ -2.48
HMGB1P09429 RNU6-170P-201ENST00000362832 104 ntBASIC-0.46□□□□□ -2.48
HMGB1P09429 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.46□□□□□ -2.48
HMGB1P09429 RNU7-165P-201ENST00000458864 60 ntBASIC-0.46□□□□□ -2.48
HMGB1P09429 RNA5SP484-201ENST00000458857 111 ntBASIC-0.47□□□□□ -2.48
HMGB1P09429 SNORA18.1-201ENST00000363418 128 ntBASIC-0.48□□□□□ -2.49
HMGB1P09429 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.48□□□□□ -2.49
HMGB1P09429 RNU6-524P-201ENST00000384270 107 ntBASIC-0.48□□□□□ -2.49
HMGB1P09429 MIR3925-201ENST00000584674 77 ntBASIC-0.48□□□□□ -2.49
HMGB1P09429 MIR7111-201ENST00000619751 72 ntBASIC-0.48□□□□□ -2.49
HMGB1P09429 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.49□□□□□ -2.49
HMGB1P09429 RNU4-11P-201ENST00000365287 132 ntBASIC-0.49□□□□□ -2.49
HMGB1P09429 SNORD114-12-201ENST00000365400 75 ntBASIC-0.49□□□□□ -2.49
HMGB1P09429 SNORA75.1-201ENST00000391130 148 ntBASIC-0.49□□□□□ -2.49
HMGB1P09429 AL109933.3-201ENST00000619095 188 ntBASIC-0.49□□□□□ -2.49
HMGB1P09429 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.5□□□□□ -2.49
HMGB1P09429 RNU6-320P-201ENST00000516511 106 ntBASIC-0.5□□□□□ -2.49
HMGB1P09429 AC084368.1-201ENST00000620935 65 ntBASIC-0.5□□□□□ -2.49
HMGB1P09429 RNU6-463P-201ENST00000384340 107 ntBASIC-0.51□□□□□ -2.49
HMGB1P09429 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.51□□□□□ -2.49
HMGB1P09429 RNU6-861P-201ENST00000516745 106 ntBASIC-0.51□□□□□ -2.49
HMGB1P09429 MIR3920-201ENST00000581751 86 ntBASIC-0.51□□□□□ -2.49
HMGB1P09429 MIR6514-201ENST00000622549 70 ntBASIC-0.51□□□□□ -2.49
HMGB1P09429 RNA5SP457-201ENST00000363657 124 ntBASIC-0.52□□□□□ -2.49
HMGB1P09429 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.52□□□□□ -2.49
HMGB1P09429 RNU6-571P-201ENST00000384128 107 ntBASIC-0.52□□□□□ -2.49
HMGB1P09429 MIR106A-201ENST00000384870 81 ntBASIC-0.52□□□□□ -2.49
HMGB1P09429 MIR519A1-201ENST00000385257 85 ntBASIC-0.52□□□□□ -2.49
HMGB1P09429 RNU7-74P-201ENST00000459104 62 ntBASIC-0.52□□□□□ -2.49
HMGB1P09429 AC141273.2-201ENST00000618989 130 ntBASIC-0.52□□□□□ -2.49
HMGB1P09429 RNU6-161P-201ENST00000363051 106 ntBASIC-0.53□□□□□ -2.49
HMGB1P09429 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.53□□□□□ -2.49
HMGB1P09429 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.53□□□□□ -2.49
HMGB1P09429 MIR34C-201ENST00000384831 77 ntBASIC-0.53□□□□□ -2.49
HMGB1P09429 HMGN2P22-201ENST00000427588 175 ntBASIC-0.53□□□□□ -2.49
HMGB1P09429 AC021753.1-201ENST00000635724 168 ntBASIC-0.53□□□□□ -2.49
HMGB1P09429 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.55□□□□□ -2.5
HMGB1P09429 RNU7-106P-201ENST00000459514 67 ntBASIC-0.55□□□□□ -2.5
HMGB1P09429 RNU6-850P-201ENST00000516934 103 ntBASIC-0.55□□□□□ -2.5
HMGB1P09429 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms