Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.11□□□□□ -2.43
VIMP08670 SNORD41.1-201ENST00000391000 69 ntBASIC-0.11□□□□□ -2.43
VIMP08670 AC097635.1-201ENST00000450678 155 ntBASIC-0.11□□□□□ -2.43
VIMP08670 RNU6-782P-201ENST00000516852 104 ntBASIC-0.11□□□□□ -2.43
VIMP08670 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.12□□□□□ -2.43
VIMP08670 RNU6-379P-201ENST00000363813 104 ntBASIC-0.12□□□□□ -2.43
VIMP08670 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.12□□□□□ -2.43
VIMP08670 RNU6-865P-201ENST00000364772 107 ntBASIC-0.12□□□□□ -2.43
VIMP08670 MIR501-201ENST00000390204 84 ntBASIC-0.12□□□□□ -2.43
VIMP08670 RNU6-269P-201ENST00000391077 97 ntBASIC-0.12□□□□□ -2.43
VIMP08670 MIR548H2-201ENST00000408874 88 ntBASIC-0.12□□□□□ -2.43
VIMP08670 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.12□□□□□ -2.43
VIMP08670 AC141557.1-201ENST00000540982 400 ntBASIC-0.12□□□□□ -2.43
VIMP08670 RNU4-11P-201ENST00000365287 132 ntBASIC-0.13□□□□□ -2.43
VIMP08670 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.13□□□□□ -2.43
VIMP08670 MIR548I2-201ENST00000408348 149 ntBASIC-0.13□□□□□ -2.43
VIMP08670 RNU7-120P-201ENST00000459334 63 ntBASIC-0.13□□□□□ -2.43
VIMP08670 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.13□□□□□ -2.43
VIMP08670 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.13□□□□□ -2.43
VIMP08670 MIR5706-201ENST00000579841 80 ntBASIC-0.13□□□□□ -2.43
VIMP08670 RNU6-682P-201ENST00000363843 106 ntBASIC-0.14□□□□□ -2.43
VIMP08670 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.14□□□□□ -2.43
VIMP08670 SNORD115-35-201ENST00000365122 82 ntBASIC-0.14□□□□□ -2.43
VIMP08670 RNU6-929P-201ENST00000384429 107 ntBASIC-0.14□□□□□ -2.43
VIMP08670 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.14□□□□□ -2.43
VIMP08670 MIR376B-201ENST00000614515 100 ntBASIC-0.14□□□□□ -2.43
VIMP08670 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
VIMP08670 RNU6-200P-201ENST00000364743 107 ntBASIC-0.15□□□□□ -2.43
VIMP08670 RNU6-652P-201ENST00000365488 107 ntBASIC-0.15□□□□□ -2.43
VIMP08670 MIR892B-201ENST00000401279 77 ntBASIC-0.15□□□□□ -2.43
VIMP08670 RNU6-138P-201ENST00000515952 107 ntBASIC-0.15□□□□□ -2.43
VIMP08670 RN7SL793P-201ENST00000583259 296 ntBASIC-0.15□□□□□ -2.43
VIMP08670 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
VIMP08670 AL353621.2-201ENST00000605340 133 ntBASIC-0.15□□□□□ -2.43
VIMP08670 U7.6-201ENST00000610841 64 ntBASIC-0.15□□□□□ -2.43
VIMP08670 AC073869.9-201ENST00000641610 120 ntBASIC-0.15□□□□□ -2.43
VIMP08670 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.16□□□□□ -2.44
VIMP08670 SNORD63B-201ENST00000411005 70 ntBASIC-0.16□□□□□ -2.44
VIMP08670 RNU7-195P-201ENST00000458793 62 ntBASIC-0.16□□□□□ -2.44
VIMP08670 RNU6-388P-201ENST00000517012 105 ntBASIC-0.16□□□□□ -2.44
VIMP08670 RNU6-389P-201ENST00000517048 105 ntBASIC-0.16□□□□□ -2.44
VIMP08670 MIR548AD-201ENST00000584780 82 ntBASIC-0.16□□□□□ -2.44
VIMP08670 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
VIMP08670 MIR193B-201ENST00000384907 83 ntBASIC-0.17□□□□□ -2.44
VIMP08670 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.17□□□□□ -2.44
VIMP08670 RNU7-197P-201ENST00000458836 62 ntBASIC-0.17□□□□□ -2.44
VIMP08670 RNU7-6P-201ENST00000516845 62 ntBASIC-0.17□□□□□ -2.44
VIMP08670 uc_338.28-201ENST00000612082 187 ntBASIC-0.17□□□□□ -2.44
VIMP08670 MIR1295B-201ENST00000636144 60 ntBASIC-0.17□□□□□ -2.44
VIMP08670 RNU6-151P-201ENST00000364158 107 ntBASIC-0.18□□□□□ -2.44
VIMP08670 RNU6-756P-201ENST00000383997 107 ntBASIC-0.18□□□□□ -2.44
VIMP08670 MIR519A1-201ENST00000385257 85 ntBASIC-0.18□□□□□ -2.44
VIMP08670 RNU6-460P-201ENST00000391158 108 ntBASIC-0.18□□□□□ -2.44
VIMP08670 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.18□□□□□ -2.44
VIMP08670 MIR3121-201ENST00000579680 77 ntBASIC-0.18□□□□□ -2.44
VIMP08670 MIR5190-201ENST00000581537 80 ntBASIC-0.18□□□□□ -2.44
VIMP08670 AC087741.2-201ENST00000619415 172 ntBASIC-0.18□□□□□ -2.44
VIMP08670 RNU6-170P-201ENST00000362832 104 ntBASIC-0.19□□□□□ -2.44
VIMP08670 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.19□□□□□ -2.44
VIMP08670 RNU6V-201ENST00000384105 107 ntBASIC-0.19□□□□□ -2.44
VIMP08670 IGKV1-22-201ENST00000524313 326 ntBASIC-0.19□□□□□ -2.44
VIMP08670 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.19□□□□□ -2.44
VIMP08670 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.2□□□□□ -2.44
VIMP08670 RNU6-915P-201ENST00000364943 103 ntBASIC-0.2□□□□□ -2.44
VIMP08670 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.2□□□□□ -2.44
VIMP08670 RNU6-571P-201ENST00000384128 107 ntBASIC-0.2□□□□□ -2.44
VIMP08670 MIR34C-201ENST00000384831 77 ntBASIC-0.2□□□□□ -2.44
VIMP08670 MT-TI-201ENST00000387365 69 ntBASIC-0.2□□□□□ -2.44
VIMP08670 RNA5SP63-201ENST00000391225 112 ntBASIC-0.2□□□□□ -2.44
VIMP08670 AC104692.1-201ENST00000472406 90 ntBASIC-0.2□□□□□ -2.44
VIMP08670 AC074198.2-201ENST00000508153 258 ntBASIC-0.2□□□□□ -2.44
VIMP08670 MIR4677-201ENST00000584153 80 ntBASIC-0.2□□□□□ -2.44
VIMP08670 MIR330-201ENST00000362196 94 ntBASIC-0.21□□□□□ -2.44
VIMP08670 RNU6-161P-201ENST00000363051 106 ntBASIC-0.21□□□□□ -2.44
VIMP08670 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.21□□□□□ -2.44
VIMP08670 SNORD110-201ENST00000408189 75 ntBASIC-0.21□□□□□ -2.44
VIMP08670 RNA5SP163-201ENST00000410304 99 ntBASIC-0.21□□□□□ -2.44
VIMP08670 AC006210.1-201ENST00000424882 111 ntBASIC-0.21□□□□□ -2.44
VIMP08670 RNU7-159P-201ENST00000459284 62 ntBASIC-0.21□□□□□ -2.44
VIMP08670 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.21□□□□□ -2.44
VIMP08670 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.21□□□□□ -2.44
VIMP08670 NAMPTP3-201ENST00000569273 224 ntBASIC-0.21□□□□□ -2.44
VIMP08670 MIR3920-201ENST00000581751 86 ntBASIC-0.21□□□□□ -2.44
VIMP08670 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.21□□□□□ -2.44
VIMP08670 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.21□□□□□ -2.44
VIMP08670 AC021753.1-201ENST00000635724 168 ntBASIC-0.21□□□□□ -2.44
VIMP08670 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.22□□□□□ -2.44
VIMP08670 RNU6-509P-201ENST00000363519 107 ntBASIC-0.22□□□□□ -2.44
VIMP08670 RNU6-524P-201ENST00000384270 107 ntBASIC-0.22□□□□□ -2.44
VIMP08670 RNY1P4-201ENST00000384595 115 ntBASIC-0.22□□□□□ -2.44
VIMP08670 MT-TG-201ENST00000387429 68 ntBASIC-0.22□□□□□ -2.44
VIMP08670 RNA5SP484-201ENST00000458857 111 ntBASIC-0.22□□□□□ -2.44
VIMP08670 RNU7-106P-201ENST00000459514 67 ntBASIC-0.22□□□□□ -2.44
VIMP08670 RNU7-13P-201ENST00000516413 62 ntBASIC-0.22□□□□□ -2.44
VIMP08670 SNORA81.3-201ENST00000517283 198 ntBASIC-0.22□□□□□ -2.44
VIMP08670 MIR3163-201ENST00000581592 73 ntBASIC-0.22□□□□□ -2.44
VIMP08670 MIR3925-201ENST00000584674 77 ntBASIC-0.22□□□□□ -2.44
VIMP08670 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.23□□□□□ -2.45
VIMP08670 MIR106A-201ENST00000384870 81 ntBASIC-0.23□□□□□ -2.45
VIMP08670 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 264.9 ms