Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU6-765P-201ENST00000516916 99 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-448P-201ENST00000517052 107 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 MIR6129-201ENST00000616087 109 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 AL035470.1-201ENST00000622571 220 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.273-201ENST00000364703 102 ntBASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-429P-201ENST00000384582 108 ntBASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 AC244098.3-201ENST00000424803 96 ntBASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 AP003327.1-201ENST00000529684 127 ntBASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 AC013244.2-201ENST00000603396 103 ntBASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 MIR376B-201ENST00000614515 100 ntBASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
MBD3L4A6NDZ8 MIR101-2-201ENST00000362195 79 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.35-201ENST00000362601 101 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-816P-201ENST00000390914 107 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-1268P-201ENST00000391214 107 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-1239P-201ENST00000391310 107 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.629-201ENST00000411368 105 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 MIR4679-2-201ENST00000578358 77 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 AL162726.3-218ENST00000636401 95 ntBASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.88□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-363P-201ENST00000362895 105 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-409P-201ENST00000384114 104 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-880P-201ENST00000384526 107 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 MIR1912-201ENST00000410389 80 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 RPL39P34-201ENST00000477141 156 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 MIR5000-201ENST00000577717 103 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 MIR4500-201ENST00000579472 76 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 MIR3612-201ENST00000579753 87 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 AL512310.12-203ENST00000640543 90 ntBASIC0.87□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.309-201ENST00000365046 111 ntBASIC0.86□□□□□ -2.27
MBD3L4A6NDZ8 RNA5SP117-201ENST00000365294 118 ntBASIC0.86□□□□□ -2.27
MBD3L4A6NDZ8 SNORA22-201ENST00000383907 134 ntBASIC0.86□□□□□ -2.27
MBD3L4A6NDZ8 MIR34C-201ENST00000384831 77 ntBASIC0.86□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-733P-201ENST00000410759 104 ntBASIC0.86□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.85□□□□□ -2.27
MBD3L4A6NDZ8 SNORD100-201ENST00000408573 76 ntBASIC0.85□□□□□ -2.27
MBD3L4A6NDZ8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.85□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.85-201ENST00000363014 111 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.281-201ENST00000364774 94 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-1325P-201ENST00000364905 105 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.360-201ENST00000365512 102 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-291P-201ENST00000384720 107 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-535P-201ENST00000384722 107 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 AC002350.1-201ENST00000490759 375 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 CYP3A137P-201ENST00000562436 69 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
MBD3L4A6NDZ8 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
MBD3L4A6NDZ8 SNORD38.2-201ENST00000384470 69 ntBASIC0.83□□□□□ -2.28
MBD3L4A6NDZ8 SNORD20-201ENST00000384550 80 ntBASIC0.83□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-679P-201ENST00000391003 106 ntBASIC0.83□□□□□ -2.28
MBD3L4A6NDZ8 AL353813.1-201ENST00000440700 253 ntBASIC0.83□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-589P-201ENST00000516485 107 ntBASIC0.83□□□□□ -2.28
MBD3L4A6NDZ8 AC068339.1-201ENST00000526965 141 ntBASIC0.83□□□□□ -2.28
MBD3L4A6NDZ8 Y_RNA.49-201ENST00000362714 112 ntBASIC0.82□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-1107P-201ENST00000364817 104 ntBASIC0.82□□□□□ -2.28
MBD3L4A6NDZ8 U8.6-201ENST00000364939 135 ntBASIC0.82□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-215P-201ENST00000365169 102 ntBASIC0.82□□□□□ -2.28
MBD3L4A6NDZ8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-469P-201ENST00000516253 101 ntBASIC0.82□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-412P-201ENST00000516434 106 ntBASIC0.82□□□□□ -2.28
MBD3L4A6NDZ8 Y_RNA.709-201ENST00000516952 92 ntBASIC0.82□□□□□ -2.28
MBD3L4A6NDZ8 MIR18A-201ENST00000362310 71 ntBASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 Y_RNA.32-201ENST00000362589 110 ntBASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-1313P-201ENST00000362622 102 ntBASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 Y_RNA.174-201ENST00000363781 105 ntBASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 BX276092.1-201ENST00000427368 251 ntBASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-1018P-201ENST00000516577 106 ntBASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 MIR5009-201ENST00000578736 100 ntBASIC0.81□□□□□ -2.28
MBD3L4A6NDZ8 RNU4-45P-201ENST00000365469 141 ntBASIC0.8□□□□□ -2.28
MBD3L4A6NDZ8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.8□□□□□ -2.28
MBD3L4A6NDZ8 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
MBD3L4A6NDZ8 SNORA31.14-201ENST00000516728 116 ntBASIC0.8□□□□□ -2.28
MBD3L4A6NDZ8 MTND5P40-201ENST00000559945 246 ntBASIC0.8□□□□□ -2.28
MBD3L4A6NDZ8 RN7SL793P-201ENST00000583259 296 ntBASIC0.8□□□□□ -2.28
MBD3L4A6NDZ8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 Y_RNA.323-201ENST00000365157 109 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-1014P-201ENST00000383940 103 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 RNY1P4-201ENST00000384595 115 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 MIR216A-201ENST00000385063 110 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 RNY4P18-201ENST00000391107 89 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
MBD3L4A6NDZ8 MIR548H5-201ENST00000580314 60 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms