Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 MIR3124-201ENST00000582636 67 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 SNORD114-1-201ENST00000362705 72 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 Y_RNA.56-201ENST00000362798 112 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 RNU6-524P-201ENST00000384270 107 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 MIR635-201ENST00000384830 98 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 MIR125B2-201ENST00000385128 89 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 SNORD100-201ENST00000408573 76 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 SNORD63B-201ENST00000411005 70 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 SNORD83.1-201ENST00000411362 77 ntBASIC1.6□□□□□ -2.15
SHISA3A0PJX4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.6□□□□□ -2.15
SHISA3A0PJX4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.59□□□□□ -2.15
SHISA3A0PJX4 Y_RNA.313-201ENST00000365095 103 ntBASIC1.59□□□□□ -2.15
SHISA3A0PJX4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SHISA3A0PJX4 RNU7-90P-201ENST00000459216 62 ntBASIC1.59□□□□□ -2.15
SHISA3A0PJX4 MIR4771-2-201ENST00000577758 74 ntBASIC1.59□□□□□ -2.15
SHISA3A0PJX4 MIR4771-1-201ENST00000582617 74 ntBASIC1.59□□□□□ -2.15
SHISA3A0PJX4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SHISA3A0PJX4 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
SHISA3A0PJX4 RNU6-466P-201ENST00000391224 103 ntBASIC1.58□□□□□ -2.16
SHISA3A0PJX4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.58□□□□□ -2.16
SHISA3A0PJX4 RPS26P5-201ENST00000418544 335 ntBASIC1.58□□□□□ -2.16
SHISA3A0PJX4 AC023790.1-201ENST00000482174 347 ntBASIC1.58□□□□□ -2.16
SHISA3A0PJX4 MIR3122-201ENST00000577243 73 ntBASIC1.58□□□□□ -2.16
SHISA3A0PJX4 AC013244.2-201ENST00000603396 103 ntBASIC1.58□□□□□ -2.16
SHISA3A0PJX4 MIR7843-201ENST00000622274 79 ntBASIC1.58□□□□□ -2.16
SHISA3A0PJX4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 RNU4-32P-201ENST00000363404 141 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 Y_RNA.283-201ENST00000364798 112 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 RNU6-652P-201ENST00000365488 107 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 RNU6-910P-201ENST00000390844 107 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 AC003989.2-201ENST00000440224 169 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 snoU13.11-201ENST00000459219 104 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 SNORD79.1-201ENST00000516069 84 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 RNU6-65P-201ENST00000516332 98 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.57□□□□□ -2.16
SHISA3A0PJX4 AC140658.3-201ENST00000567603 271 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 MIR4536-1-201ENST00000583537 88 ntBASIC1.57□□□□□ -2.16
SHISA3A0PJX4 RNU6-24P-201ENST00000384440 107 ntBASIC1.56□□□□□ -2.16
SHISA3A0PJX4 U8.13-201ENST00000390842 128 ntBASIC1.56□□□□□ -2.16
SHISA3A0PJX4 SNORD12-201ENST00000391002 90 ntBASIC1.56□□□□□ -2.16
SHISA3A0PJX4 RNU7-106P-201ENST00000459514 67 ntBASIC1.56□□□□□ -2.16
SHISA3A0PJX4 RNU6-857P-201ENST00000515893 110 ntBASIC1.56□□□□□ -2.16
SHISA3A0PJX4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.56□□□□□ -2.16
SHISA3A0PJX4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
SHISA3A0PJX4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SHISA3A0PJX4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SHISA3A0PJX4 RNU6-811P-201ENST00000384069 107 ntBASIC1.55□□□□□ -2.16
SHISA3A0PJX4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.55□□□□□ -2.16
SHISA3A0PJX4 AC023827.1-201ENST00000569247 97 ntBASIC1.55□□□□□ -2.16
SHISA3A0PJX4 SNORD92-201ENST00000585078 85 ntBASIC1.55□□□□□ -2.16
SHISA3A0PJX4 TRAJ51-201ENST00000504127 63 ntBASIC1.54□□□□□ -2.16
SHISA3A0PJX4 RNU7-40P-201ENST00000516397 64 ntBASIC1.54□□□□□ -2.16
SHISA3A0PJX4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.54□□□□□ -2.16
SHISA3A0PJX4 RNU7-156P-201ENST00000517214 74 ntBASIC1.54□□□□□ -2.16
SHISA3A0PJX4 MIR4524B-201ENST00000581569 115 ntBASIC1.54□□□□□ -2.16
SHISA3A0PJX4 MIR4676-201ENST00000583078 72 ntBASIC1.54□□□□□ -2.16
SHISA3A0PJX4 ZNF355P-201ENST00000427301 3216 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 MIR9-3-201ENST00000385084 90 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 MIR938-201ENST00000401216 83 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 RNU6-994P-201ENST00000410507 111 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 AC092628.1-201ENST00000436250 252 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 AC097635.1-201ENST00000450678 155 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 RNU6-75P-201ENST00000515944 104 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 SNORA25.13-201ENST00000516395 103 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.53□□□□□ -2.16
SHISA3A0PJX4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SHISA3A0PJX4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SHISA3A0PJX4 RNU6-364P-201ENST00000384387 107 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 MIR548U-201ENST00000390728 81 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 snoU13.23-201ENST00000458863 104 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 RNU7-153P-201ENST00000516455 62 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 SNORA70.22-201ENST00000517160 124 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 AC019288.1-201ENST00000557918 224 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.52□□□□□ -2.17
SHISA3A0PJX4 AL645939.4-201ENST00000604495 135 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.52□□□□□ -2.17
SHISA3A0PJX4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SHISA3A0PJX4 Y_RNA.244-201ENST00000364484 109 ntBASIC1.51□□□□□ -2.17
SHISA3A0PJX4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
SHISA3A0PJX4 MIR1289-2-201ENST00000408360 111 ntBASIC1.51□□□□□ -2.17
SHISA3A0PJX4 RNU7-195P-201ENST00000458793 62 ntBASIC1.51□□□□□ -2.17
SHISA3A0PJX4 RNU6-448P-201ENST00000517052 107 ntBASIC1.51□□□□□ -2.17
SHISA3A0PJX4 AC138907.6-201ENST00000568401 126 ntBASIC1.51□□□□□ -2.17
SHISA3A0PJX4 AC138869.1-201ENST00000568623 124 ntBASIC1.51□□□□□ -2.17
SHISA3A0PJX4 AC027335.2-201ENST00000624030 375 ntBASIC1.51□□□□□ -2.17
SHISA3A0PJX4 RNU6-315P-201ENST00000362666 107 ntBASIC1.5□□□□□ -2.17
SHISA3A0PJX4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SHISA3A0PJX4 MIR583-201ENST00000384846 75 ntBASIC1.5□□□□□ -2.17
SHISA3A0PJX4 AC015818.7-201ENST00000428754 109 ntBASIC1.5□□□□□ -2.17
SHISA3A0PJX4 AC108210.2-201ENST00000503681 201 ntBASIC1.5□□□□□ -2.17
SHISA3A0PJX4 MIR4796-201ENST00000580742 81 ntBASIC1.5□□□□□ -2.17
SHISA3A0PJX4 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms