Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.72□□□□□ -2.29
TCRBV7S3A2A0A539 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.72□□□□□ -2.29
TCRBV7S3A2A0A539 MIR101-2-201ENST00000362195 79 ntBASIC0.71□□□□□ -2.3
TCRBV7S3A2A0A539 SNORA63.5-201ENST00000363548 123 ntBASIC0.71□□□□□ -2.3
TCRBV7S3A2A0A539 Y_RNA.323-201ENST00000365157 109 ntBASIC0.71□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-535P-201ENST00000384722 107 ntBASIC0.71□□□□□ -2.3
TCRBV7S3A2A0A539 MIR548I2-201ENST00000408348 149 ntBASIC0.71□□□□□ -2.3
TCRBV7S3A2A0A539 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.71□□□□□ -2.3
TCRBV7S3A2A0A539 AC108729.3-201ENST00000513484 108 ntBASIC0.71□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-412P-201ENST00000516434 106 ntBASIC0.71□□□□□ -2.3
TCRBV7S3A2A0A539 Y_RNA.32-201ENST00000362589 110 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 Y_RNA.49-201ENST00000362714 112 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 Y_RNA.116-201ENST00000363292 103 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 Y_RNA.273-201ENST00000364703 102 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 Y_RNA.377-201ENST00000365644 108 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-1056P-201ENST00000383996 107 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-1201P-201ENST00000384227 107 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 SNORD38.2-201ENST00000384470 69 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 RNA5SP102-201ENST00000516865 106 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 MIR5009-201ENST00000578736 100 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 MIR548H5-201ENST00000580314 60 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 RNU7-10P-201ENST00000607194 63 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 AL512310.12-203ENST00000640543 90 ntBASIC0.7□□□□□ -2.3
TCRBV7S3A2A0A539 Y_RNA.35-201ENST00000362601 101 ntBASIC0.69□□□□□ -2.3
TCRBV7S3A2A0A539 SNORD38.1-201ENST00000363863 68 ntBASIC0.69□□□□□ -2.3
TCRBV7S3A2A0A539 U8.6-201ENST00000364939 135 ntBASIC0.69□□□□□ -2.3
TCRBV7S3A2A0A539 RNA5SP222-201ENST00000411039 105 ntBASIC0.69□□□□□ -2.3
TCRBV7S3A2A0A539 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
TCRBV7S3A2A0A539 SNORA31.14-201ENST00000516728 116 ntBASIC0.69□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-135P-201ENST00000516769 101 ntBASIC0.69□□□□□ -2.3
TCRBV7S3A2A0A539 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 RNU1-93P-201ENST00000364704 169 ntBASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-571P-201ENST00000384128 107 ntBASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 SNRPGP12-201ENST00000449481 213 ntBASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 MIR3678-201ENST00000578455 94 ntBASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 MIR4694-201ENST00000578534 80 ntBASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 AL442128.1-201ENST00000615151 90 ntBASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 U2.22-201ENST00000636441 106 ntBASIC0.68□□□□□ -2.3
TCRBV7S3A2A0A539 Y_RNA.629-201ENST00000411368 105 ntBASIC0.67□□□□□ -2.3
TCRBV7S3A2A0A539 RNA5SP245-201ENST00000364239 121 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-1107P-201ENST00000364817 104 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 MIR635-201ENST00000384830 98 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 MIR577-201ENST00000385196 96 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 MIR519A1-201ENST00000385257 85 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 BX276092.1-201ENST00000427368 251 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 AC092628.1-201ENST00000436250 252 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 AC244505.6-201ENST00000452829 130 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-237P-201ENST00000515985 71 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 RNU6-589P-201ENST00000516485 107 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 AC138869.1-201ENST00000568623 124 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
TCRBV7S3A2A0A539 RNY3P2-201ENST00000362918 102 ntBASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 Y_RNA.247-201ENST00000364500 92 ntBASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 Y_RNA.338-201ENST00000365320 114 ntBASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-1014P-201ENST00000383940 103 ntBASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 MIR644A-201ENST00000385262 94 ntBASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-469P-201ENST00000516253 101 ntBASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 MIR6129-201ENST00000616087 109 ntBASIC0.65□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-170P-201ENST00000362832 104 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-832P-201ENST00000363319 107 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-1099P-201ENST00000363533 107 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 Y_RNA.291-201ENST00000364886 113 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 MIR548G-201ENST00000408442 89 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 TRAJ51-201ENST00000504127 63 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-850P-201ENST00000516934 103 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 MTND5P40-201ENST00000559945 246 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 MIR548AI-201ENST00000579940 88 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-90P-201ENST00000606352 106 ntBASIC0.64□□□□□ -2.31
TCRBV7S3A2A0A539 RNA5SP432-201ENST00000362480 116 ntBASIC0.63□□□□□ -2.31
TCRBV7S3A2A0A539 Y_RNA.173-201ENST00000363776 113 ntBASIC0.63□□□□□ -2.31
TCRBV7S3A2A0A539 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
TCRBV7S3A2A0A539 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-1053P-201ENST00000515930 101 ntBASIC0.63□□□□□ -2.31
TCRBV7S3A2A0A539 RNA5SP94-201ENST00000516917 108 ntBASIC0.63□□□□□ -2.31
TCRBV7S3A2A0A539 MIR4639-201ENST00000584938 69 ntBASIC0.63□□□□□ -2.31
TCRBV7S3A2A0A539 AC096720.1-201ENST00000604441 183 ntBASIC0.63□□□□□ -2.31
TCRBV7S3A2A0A539 Y_RNA.342-201ENST00000365352 113 ntBASIC0.62□□□□□ -2.31
TCRBV7S3A2A0A539 RNY1P8-201ENST00000383970 114 ntBASIC0.62□□□□□ -2.31
TCRBV7S3A2A0A539 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.62□□□□□ -2.31
TCRBV7S3A2A0A539 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.62□□□□□ -2.31
TCRBV7S3A2A0A539 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
TCRBV7S3A2A0A539 RNU6-1290P-201ENST00000362957 109 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 Y_RNA.78-201ENST00000362970 110 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 SNORD28-201ENST00000384706 75 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 SNORD63B-201ENST00000411005 70 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 SPINT5P-201ENST00000448174 155 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 AC097635.1-201ENST00000450678 155 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 Y_RNA.709-201ENST00000516952 92 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 AC141557.1-201ENST00000540982 400 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 MIR6828-201ENST00000636181 60 ntBASIC0.61□□□□□ -2.31
TCRBV7S3A2A0A539 MIR520E-201ENST00000384867 87 ntBASIC0.6□□□□□ -2.31
TCRBV7S3A2A0A539 RNA5SP47-201ENST00000517230 109 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms