Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
PCDHGA3Q9Y5H0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.06□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU4-58P-201ENST00000363192 141 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 Y_RNA.507-201ENST00000384500 99 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU6-1081P-201ENST00000384537 107 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 MIR206-201ENST00000384872 86 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 MT-TI-201ENST00000387365 69 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU6-1154P-201ENST00000391001 104 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 AL606753.1-201ENST00000427435 87 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 MIR1270-201ENST00000459320 83 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
PCDHGA3Q9Y5H0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 RNA5SP205-201ENST00000364653 136 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU6-865P-201ENST00000364772 107 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 Y_RNA.540-201ENST00000384638 111 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 MIR520H-201ENST00000385126 88 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 MIR1912-201ENST00000410389 80 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU7-48P-201ENST00000458875 63 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 AP003327.1-201ENST00000529684 127 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 DEFB131E-201ENST00000532329 154 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 AC007012.1-201ENST00000567192 175 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 MIR151B-201ENST00000584249 96 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 MIR6082-201ENST00000613604 109 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 AL365222.1-201ENST00000614661 98 ntBASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU2-51P-201ENST00000410708 197 ntBASIC1.03□□□□□ -2.24
PCDHGA3Q9Y5H0 AC004941.2-201ENST00000427009 228 ntBASIC1.03□□□□□ -2.24
PCDHGA3Q9Y5H0 AC015818.7-201ENST00000428754 109 ntBASIC1.03□□□□□ -2.24
PCDHGA3Q9Y5H0 AC087499.7-201ENST00000441958 109 ntBASIC1.03□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU7-102P-201ENST00000458948 62 ntBASIC1.03□□□□□ -2.24
PCDHGA3Q9Y5H0 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
PCDHGA3Q9Y5H0 RNU6-363P-201ENST00000362895 105 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.309-201ENST00000365046 111 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.328-201ENST00000365208 113 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.353-201ENST00000365440 108 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU4-45P-201ENST00000365469 141 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 SNORA72.6-201ENST00000384520 129 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 AC090897.1-201ENST00000580909 226 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 AL353765.1-201ENST00000605514 183 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 AP001362.1-201ENST00000625165 124 ntBASIC1.02□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 RNA5SP133-201ENST00000363368 119 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.261-201ENST00000364631 102 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 SNORD38.2-201ENST00000384470 69 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.525-201ENST00000384570 113 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-429P-201ENST00000384582 108 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR608-201ENST00000384820 100 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 AC096949.1-201ENST00000412047 152 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-412P-201ENST00000516434 106 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-448P-201ENST00000517052 107 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR8066-201ENST00000617280 78 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 AC105081.1-201ENST00000617727 106 ntBASIC1.01□□□□□ -2.25
PCDHGA3Q9Y5H0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.13-201ENST00000362403 112 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU4-67P-201ENST00000364569 141 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.362-201ENST00000365518 110 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 SNORD99-201ENST00000408612 74 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR548J-201ENST00000408833 112 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-735P-201ENST00000410612 107 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 SNORD33.1-201ENST00000516213 88 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-1018P-201ENST00000516577 106 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-521P-201ENST00000516663 105 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 U6.109-201ENST00000636749 87 ntBASIC1□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.49-201ENST00000362714 112 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.119-201ENST00000363301 96 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-409P-201ENST00000384114 104 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 AC138749.4-201ENST00000563970 127 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.773-201ENST00000607168 90 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 AL162726.3-218ENST00000636401 95 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 U2.22-201ENST00000636441 106 ntBASIC0.99□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.344-201ENST00000365381 112 ntBASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-880P-201ENST00000384526 107 ntBASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR548AI-201ENST00000579940 88 ntBASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU7-10P-201ENST00000607194 63 ntBASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR6515-201ENST00000619843 57 ntBASIC0.98□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR101-2-201ENST00000362195 79 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.155-201ENST00000363632 101 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 RNA5SP117-201ENST00000365294 118 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-1056P-201ENST00000383996 107 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 SNORD116-21-201ENST00000384507 92 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-110P-201ENST00000384508 104 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 264.5 ms